RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 RANBP6O60518 1105 aaKnown RBP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 ATP6V1AP38606 617 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 SIK1P57059 783 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 SSRP1Q08945 709 aaKnown RBP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 PPP2R5BQ15173 497 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 DDB1Q16531 1140 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 AIFM3Q96NN9 605 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 CDC5LQ99459 802 aaKnown RBP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 SEC31BQ9NQW1 1179 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 PAXBP1Q9Y5B6 917 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 CUTAO60888 179 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 SYKP43405 635 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 TPM4P67936 248 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 DPCR1Q3MIW9 517 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 RESP18Q5W5W9 173 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 CLEC4GQ6UXB4 293 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 PHKBQ93100 1093 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 ANAPC4Q9UJX5 808 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 ZNF804BA4D1E1 1349 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 LAMB2P55268 1798 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 MYO1BO43795 1136 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 BCAMP50895 628 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 CTDSPL2Q05D32 466 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 GNL2Q13823 731 aaKnown RBP10.68□□□□□ -0.7
CPNE4-210ENST00000512332 SYCP1Q15431 976 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 SHC4Q6S5L8 630 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 ZNF652Q9Y2D9 606 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 TACC3Q9Y6A5 838 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 SLC4A4Q9Y6R1 1079 aa10.68□□□□□ -0.7
CPNE4-210ENST00000512332 BCL9LQ86UU0 1499 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 BCORQ6W2J9 1755 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
CPNE4-210ENST00000512332 RXRAP19793 462 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 CHRNDQ07001 517 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 NCAPHQ15003 741 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 NOSTRINQ8IVI9 506 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 TRIM22Q8IYM9 498 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 LCORLQ8N3X6 602 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
CPNE4-210ENST00000512332 FOXP1Q9H334 677 aaPredicted RBP10.67□□□□□ -0.7
CPNE4-210ENST00000512332 NIP7Q9Y221 180 aaKnown RBP eCLIP10.67□□□□□ -0.7
CPNE4-210ENST00000512332 MORC2Q9Y6X9 1032 aaPredicted RBP10.67□□□□□ -0.7
CPNE4-210ENST00000512332 CHD4Q14839 1912 aa10.67□□□□□ -0.7
CPNE4-210ENST00000512332 PHLPP1O60346 1717 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 MROH7-TTC4A0A0A0MT08 1334 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 ERICH2A1L162 156 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 MMP1P03956 469 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 SKILP12757 684 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 MARCKSP29966 332 aaPredicted RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 KCNJ6P48051 423 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 TDO2P48775 406 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 CCZ1BP86790 482 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 CCZ1P86791 482 aaPredicted RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 ITPK1Q13572 414 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 SAFBQ15424 915 aaKnown RBP eCLIP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 ERCC4Q92889 916 aaPredicted RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 NOL10Q9BSC4 688 aaKnown RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 INCENPQ9NQS7 918 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 GNL3LQ9NVN8 582 aaKnown RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 LRP2BPQ9P2M1 347 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 A0A087WWV3 80 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 SNAP23O00161 211 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 PRKAB2O43741 272 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 DEXIO95424 95 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 PCP11498 1178 aaKnown RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 TNNT1P13805 278 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 UBE4AQ14139 1066 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 WTAPQ15007 396 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 SF3B3Q15393 1217 aaKnown RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 RTN1Q16799 776 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 RILPL1Q5EBL4 403 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 BARGINQ6ZT62 677 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 ZNF710Q8N1W2 664 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 CRACR2BQ8N4Y2 399 aaPredicted RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 MARCH10Q8NA82 808 aaPredicted RBP10.66□□□□□ -0.7
CPNE4-210ENST00000512332 SLC26A6Q9BXS9 759 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 ROBO1Q9Y6N7 1651 aa10.66□□□□□ -0.7
CPNE4-210ENST00000512332 PPARAQ07869 468 aa10.65□□□□□ -0.7
CPNE4-210ENST00000512332 TPD52L1Q16890 204 aaPredicted RBP10.65□□□□□ -0.7
CPNE4-210ENST00000512332 NYAP1Q6ZVC0 841 aa10.65□□□□□ -0.7
CPNE4-210ENST00000512332 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
CPNE4-210ENST00000512332 ZNF579Q8NAF0 562 aaKnown RBP10.65□□□□□ -0.7
CPNE4-210ENST00000512332 MYL10Q9BUA6 226 aa10.65□□□□□ -0.7
CPNE4-210ENST00000512332 ZNF831Q5JPB2 1677 aa10.65□□□□□ -0.7
CPNE4-210ENST00000512332 TMED8Q6PL24 325 aaPredicted RBP10.65□□□□□ -0.71
CPNE4-210ENST00000512332 KRBA2Q6ZNG9 492 aa10.65□□□□□ -0.71
CPNE4-210ENST00000512332 FILIP1Q7Z7B0 1213 aa10.65□□□□□ -0.71
CPNE4-210ENST00000512332 FANCBQ8NB91 859 aa10.65□□□□□ -0.71
CPNE4-210ENST00000512332 CCDC150Q8NCX0 1101 aa10.65□□□□□ -0.71
CPNE4-210ENST00000512332 C16orf45Q96MC5 204 aaPredicted RBP10.65□□□□□ -0.71
CPNE4-210ENST00000512332 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.71
CPNE4-210ENST00000512332 BSDC1Q9NW68 430 aaPredicted RBP10.65□□□□□ -0.71
CPNE4-210ENST00000512332 KCNH3Q9ULD8 1083 aa10.65□□□□□ -0.71
CPNE4-210ENST00000512332 MYH14Q7Z406 1995 aaKnown RBP10.65□□□□□ -0.71
CPNE4-210ENST00000512332 ECM29Q5VYK3 1845 aa10.65□□□□□ -0.71
CPNE4-210ENST00000512332 NRAPQ86VF7 1730 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms