RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CYP2C8P10632 490 aa12.91□□□□□ -0.34
PDLIM5-217ENST00000512274 IL1R1P14778 569 aa12.91□□□□□ -0.34
PDLIM5-217ENST00000512274 FKBP1AP62942 108 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-217ENST00000512274 NUCB1Q02818 461 aa12.91□□□□□ -0.34
PDLIM5-217ENST00000512274 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
PDLIM5-217ENST00000512274 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
PDLIM5-217ENST00000512274 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-217ENST00000512274 POTEB2H3BUK9 544 aa12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 IGKV5-2P06315 115 aa12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 BCRP11274 1271 aa12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 CRKP46108 304 aa12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 MDM2Q00987 491 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 CWF19L2Q2TBE0 894 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 SLC4A10Q6U841 1118 aa12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 MIGA2Q7L4E1 593 aa12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 UBE3BQ7Z3V4 1068 aa12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 PAK6Q9NQU5 681 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-217ENST00000512274 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 INPP5BP32019 993 aa12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 PPATQ06203 517 aa12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 MFSD14BQ5SR56 506 aa12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 MAFAQ8NHW3 353 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 SERPINA10Q9UK55 444 aa12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 AK9Q5TCS8 1911 aa12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
PDLIM5-217ENST00000512274 TNPO2O14787 897 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-217ENST00000512274 ATP8B2P98198 1209 aa12.88□□□□□ -0.35
PDLIM5-217ENST00000512274 FAM109BQ6ICB4 259 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-217ENST00000512274 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
PDLIM5-217ENST00000512274 PXYLP1Q8TE99 480 aa12.88□□□□□ -0.35
PDLIM5-217ENST00000512274 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
PDLIM5-217ENST00000512274 CAPN2P17655 700 aa12.87□□□□□ -0.35
PDLIM5-217ENST00000512274 MOGSQ13724 837 aa12.87□□□□□ -0.35
PDLIM5-217ENST00000512274 POLA2Q14181 598 aa12.87□□□□□ -0.35
PDLIM5-217ENST00000512274 ZNF697Q5TEC3 545 aa12.87□□□□□ -0.35
PDLIM5-217ENST00000512274 C15orf52Q6ZUT6 534 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-217ENST00000512274 PARK7Q99497 189 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-217ENST00000512274 C11orf49Q9H6J7 331 aa12.87□□□□□ -0.35
PDLIM5-217ENST00000512274 NEURL1BA8MQ27 555 aa12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 GRM8O00222 908 aa12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 GRIK5Q16478 980 aa12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 GPAT2Q6NUI2 795 aa12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 ANKLE1Q8NAG6 615 aa12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 CDX2Q99626 313 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 ZNF341Q9BYN7 854 aa12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 FAM205AQ6ZU69 1335 aa12.86□□□□□ -0.35
PDLIM5-217ENST00000512274 ANKRD18BA2A2Z9 1011 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 H7C1W4 665 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 TRIM32Q13049 653 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 IRF5Q13568 498 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 GCKRQ14397 625 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 C1orf115Q9H7X2 142 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 KCNH4Q9UQ05 1017 aa12.85□□□□□ -0.35
PDLIM5-217ENST00000512274 GYG1P46976 350 aa12.84□□□□□ -0.35
PDLIM5-217ENST00000512274 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-217ENST00000512274 FAM122AQ96E09 287 aa12.84□□□□□ -0.35
PDLIM5-217ENST00000512274 BACH2Q9BYV9 841 aa12.84□□□□□ -0.35
PDLIM5-217ENST00000512274 TMOD2Q9NZR1 351 aa12.84□□□□□ -0.35
PDLIM5-217ENST00000512274 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-217ENST00000512274 CHMP3Q9Y3E7 222 aa12.84□□□□□ -0.35
PDLIM5-217ENST00000512274 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-217ENST00000512274 TMEM265A0A087WTH1 108 aa12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 CSF1RP07333 972 aa12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 NBPF7P0C2Y1 421 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 PLA2G5P39877 138 aa12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 HSP90AB4PQ58FF6 505 aa12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 GADL1Q6ZQY3 521 aa12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 COA7Q96BR5 231 aa12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 HOOK2Q96ED9 719 aa12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 IQSEC3Q9UPP2 1182 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 PFASO15067 1338 aa12.83□□□□□ -0.36
PDLIM5-217ENST00000512274 TNFRSF10AO00220 468 aa12.82□□□□□ -0.36
PDLIM5-217ENST00000512274 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
PDLIM5-217ENST00000512274 CASP7P55210 303 aa12.82□□□□□ -0.36
PDLIM5-217ENST00000512274 CHAF1AQ13111 956 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-217ENST00000512274 ZNF594Q96JF6 807 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-217ENST00000512274 PLA2G12BQ9BX93 195 aa12.82□□□□□ -0.36
PDLIM5-217ENST00000512274 SEMA6BQ9H3T3 888 aa12.82□□□□□ -0.36
PDLIM5-217ENST00000512274 C9orf78Q9NZ63 289 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-217ENST00000512274 PDE4AP27815 886 aa12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 HIBADHP31937 336 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 TCP10Q12799 353 aa12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 LRRC26Q2I0M4 334 aa12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 BMP2KLQ5H9B9 411 aa12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 FAM83AQ86UY5 434 aa12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 ANKRD13CQ8N6S4 541 aa12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 SMCR8Q8TEV9 937 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 TEKT1Q969V4 418 aa12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
PDLIM5-217ENST00000512274 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms