RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 RFX7Q2KHR2 1363 aa23.63■■□□□ 1.37
SMAD1-211ENST00000512019 GPR25O00155 361 aa23.62■■□□□ 1.37
SMAD1-211ENST00000512019 NAA16Q6N069 864 aaPredicted RBP23.62■■□□□ 1.37
SMAD1-211ENST00000512019 TEKT1Q969V4 418 aa23.62■■□□□ 1.37
SMAD1-211ENST00000512019 CLMNQ96JQ2 1002 aa23.62■■□□□ 1.37
SMAD1-211ENST00000512019 MRIQ9BWK5 157 aa23.62■■□□□ 1.37
SMAD1-211ENST00000512019 VEZTQ9HBM0 779 aa23.62■■□□□ 1.37
SMAD1-211ENST00000512019 MYO5AQ9Y4I1 1855 aaKnown RBP23.62■■□□□ 1.37
SMAD1-211ENST00000512019 MYH7P12883 1935 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 AK9Q5TCS8 1911 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 LDHCP07864 332 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 ZFYP08048 801 aaPredicted RBP23.61■■□□□ 1.37
SMAD1-211ENST00000512019 PDE6AP16499 860 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 CRKP46108 304 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 SREBF2Q12772 1141 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 SLC9C2Q5TAH2 1124 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 MAGEB6Q8N7X4 407 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 HPS5Q9UPZ3 1129 aa23.61■■□□□ 1.37
SMAD1-211ENST00000512019 SDSP20132 328 aa23.6■■□□□ 1.37
SMAD1-211ENST00000512019 RBM5P52756 815 aaKnown RBP eCLIP23.6■■□□□ 1.37
SMAD1-211ENST00000512019 DIXDC1Q155Q3 683 aa23.6■■□□□ 1.37
SMAD1-211ENST00000512019 MAP3K11Q16584 847 aa23.6■■□□□ 1.37
SMAD1-211ENST00000512019 NBPF12Q5TAG4 269 aaPredicted RBP23.6■■□□□ 1.37
SMAD1-211ENST00000512019 HHIPL2Q6UWX4 724 aa23.6■■□□□ 1.37
SMAD1-211ENST00000512019 PPP2R3BQ9Y5P8 575 aa23.6■■□□□ 1.37
SMAD1-211ENST00000512019 MROH7-TTC4A0A0A0MT08 1334 aa23.59■■□□□ 1.37
SMAD1-211ENST00000512019 MYO1BO43795 1136 aa23.59■■□□□ 1.37
SMAD1-211ENST00000512019 ADD2P35612 726 aa23.59■■□□□ 1.37
SMAD1-211ENST00000512019 GAKO14976 1311 aa23.59■■□□□ 1.37
SMAD1-211ENST00000512019 CYP7A1P22680 504 aa23.58■■□□□ 1.37
SMAD1-211ENST00000512019 UBE3CQ15386 1083 aa23.58■■□□□ 1.37
SMAD1-211ENST00000512019 ZNF384Q8TF68 577 aa23.58■■□□□ 1.37
SMAD1-211ENST00000512019 SLC10A4Q96EP9 437 aa23.58■■□□□ 1.37
SMAD1-211ENST00000512019 FAM163AQ96GL9 167 aaPredicted RBP23.58■■□□□ 1.37
SMAD1-211ENST00000512019 WNK4Q96J92 1243 aa23.58■■□□□ 1.37
SMAD1-211ENST00000512019 ZDHHC15Q96MV8 337 aa23.58■■□□□ 1.37
SMAD1-211ENST00000512019 NOL10Q9BSC4 688 aaKnown RBP23.58■■□□□ 1.37
SMAD1-211ENST00000512019 ZNF532Q9HCE3 1301 aa23.58■■□□□ 1.36
SMAD1-211ENST00000512019 MYH2Q9UKX2 1941 aa23.57■■□□□ 1.36
SMAD1-211ENST00000512019 HIP1O00291 1037 aa23.57■■□□□ 1.36
SMAD1-211ENST00000512019 RNF113AO15541 343 aaKnown RBP23.57■■□□□ 1.36
SMAD1-211ENST00000512019 PPP1R12BO60237 982 aaPredicted RBP23.57■■□□□ 1.36
SMAD1-211ENST00000512019 RASA3Q14644 834 aa23.57■■□□□ 1.36
SMAD1-211ENST00000512019 CFHR5Q9BXR6 569 aa23.57■■□□□ 1.36
SMAD1-211ENST00000512019 DAGLAQ9Y4D2 1042 aa23.57■■□□□ 1.36
SMAD1-211ENST00000512019 USP2O75604 605 aaPredicted RBP23.56■■□□□ 1.36
SMAD1-211ENST00000512019 NOM1Q5C9Z4 860 aaKnown RBP23.56■■□□□ 1.36
SMAD1-211ENST00000512019 TDRD3Q9H7E2 651 aaKnown RBP23.56■■□□□ 1.36
SMAD1-211ENST00000512019 TCRBV5S4A2TA0A5A2 114 aa23.55■■□□□ 1.36
SMAD1-211ENST00000512019 MANSC4A6NHS7 340 aaPredicted RBP23.55■■□□□ 1.36
SMAD1-211ENST00000512019 BAG3O95817 575 aa23.55■■□□□ 1.36
SMAD1-211ENST00000512019 GJA5P36382 358 aa23.55■■□□□ 1.36
SMAD1-211ENST00000512019 SUPT20HL1Q3ZLR7 823 aa23.55■■□□□ 1.36
SMAD1-211ENST00000512019 SPDYE2Q495Y8 402 aa23.55■■□□□ 1.36
SMAD1-211ENST00000512019 CERS3Q8IU89 383 aa23.55■■□□□ 1.36
SMAD1-211ENST00000512019 CDAN1Q8IWY9 1227 aa23.55■■□□□ 1.36
SMAD1-211ENST00000512019 DIAPH3Q9NSV4 1193 aa23.55■■□□□ 1.36
SMAD1-211ENST00000512019 ZNF70Q9UC06 446 aaPredicted RBP23.55■■□□□ 1.36
SMAD1-211ENST00000512019 IGF2BP3O00425 579 aaKnown RBP eCLIP23.54■■□□□ 1.36
SMAD1-211ENST00000512019 FKTNO75072 461 aa23.54■■□□□ 1.36
SMAD1-211ENST00000512019 PKN2Q16513 984 aaKnown RBP23.54■■□□□ 1.36
SMAD1-211ENST00000512019 IFNL1Q8IU54 200 aa23.54■■□□□ 1.36
SMAD1-211ENST00000512019 APPBP2Q92624 585 aa23.54■■□□□ 1.36
SMAD1-211ENST00000512019 GPR75-ASB3A0A0A6YYF3 556 aa23.53■■□□□ 1.36
SMAD1-211ENST00000512019 ZBTB48P10074 688 aaPredicted RBP23.53■■□□□ 1.36
SMAD1-211ENST00000512019 BTDP43251 543 aa23.53■■□□□ 1.36
SMAD1-211ENST00000512019 ADGRA1Q86SQ6 560 aa23.53■■□□□ 1.36
SMAD1-211ENST00000512019 PLCG2P16885 1265 aa23.52■■□□□ 1.36
SMAD1-211ENST00000512019 APOBEC3HQ6NTF7 200 aaKnown RBP23.52■■□□□ 1.36
SMAD1-211ENST00000512019 PDE4DIPQ5VU43 2346 aa23.51■■□□□ 1.35
SMAD1-211ENST00000512019 MAGEB6P1A0A0J9YX57 407 aa23.51■■□□□ 1.35
SMAD1-211ENST00000512019 SLC34A2O95436 690 aa23.51■■□□□ 1.35
SMAD1-211ENST00000512019 ALDH1A1P00352 501 aa23.51■■□□□ 1.35
SMAD1-211ENST00000512019 IREB2P48200 963 aaKnown RBP23.51■■□□□ 1.35
SMAD1-211ENST00000512019 ZMYM1Q5SVZ6 1142 aa23.51■■□□□ 1.35
SMAD1-211ENST00000512019 FBXO46Q6PJ61 603 aaPredicted RBP23.51■■□□□ 1.35
SMAD1-211ENST00000512019 MIGA1Q8NAN2 632 aa23.51■■□□□ 1.35
SMAD1-211ENST00000512019 TEPSINQ96N21 525 aa23.51■■□□□ 1.35
SMAD1-211ENST00000512019 AATFQ9NY61 560 aaKnown RBP eCLIP23.51■■□□□ 1.35
SMAD1-211ENST00000512019 TCP10L2B9ZVM9 353 aa23.5■■□□□ 1.35
SMAD1-211ENST00000512019 CHGBP05060 677 aa23.5■■□□□ 1.35
SMAD1-211ENST00000512019 INHBEP58166 350 aa23.5■■□□□ 1.35
SMAD1-211ENST00000512019 PPP4CP60510 307 aa23.5■■□□□ 1.35
SMAD1-211ENST00000512019 SLFNL1Q499Z3 407 aa23.5■■□□□ 1.35
SMAD1-211ENST00000512019 CASC1Q6TDU7 716 aa23.5■■□□□ 1.35
SMAD1-211ENST00000512019 HELLSQ9NRZ9 838 aa23.5■■□□□ 1.35
SMAD1-211ENST00000512019 TMOD2Q9NZR1 351 aa23.5■■□□□ 1.35
SMAD1-211ENST00000512019 UNCXA6NJT0 531 aa23.49■■□□□ 1.35
SMAD1-211ENST00000512019 CDC45O75419 566 aa23.49■■□□□ 1.35
SMAD1-211ENST00000512019 NMIQ13287 307 aaPredicted RBP23.49■■□□□ 1.35
SMAD1-211ENST00000512019 TNFAIP1Q13829 316 aa23.49■■□□□ 1.35
SMAD1-211ENST00000512019 ANKRD13AQ8IZ07 590 aa23.49■■□□□ 1.35
SMAD1-211ENST00000512019 TMEM39BQ9GZU3 492 aa23.49■■□□□ 1.35
SMAD1-211ENST00000512019 ELP3Q9H9T3 547 aa23.49■■□□□ 1.35
SMAD1-211ENST00000512019 MBD4O95243 580 aa23.48■■□□□ 1.35
SMAD1-211ENST00000512019 CHMLP26374 656 aa23.48■■□□□ 1.35
SMAD1-211ENST00000512019 RUFY2Q8WXA3 655 aa23.48■■□□□ 1.35
SMAD1-211ENST00000512019 OSBP2Q969R2 916 aa23.48■■□□□ 1.35
SMAD1-211ENST00000512019 PTPN18Q99952 460 aa23.48■■□□□ 1.35
SMAD1-211ENST00000512019 RIOK1Q9BRS2 568 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms