RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 PCDH11XQ9BZA7 1347 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 PCDH11YQ9BZA8 1340 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 LRRC10BA6NIK2 292 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 PHKG2P15735 406 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 GNAI1P63096 354 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 FOXO4P98177 505 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 CALD1Q05682 793 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 CTDSPL2Q05D32 466 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 SUZ12Q15022 739 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 SF3B3Q15393 1217 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 EARS2Q5JPH6 523 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 TTC6Q86TZ1 520 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 TEX2Q8IWB9 1127 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 AZIN2Q96A70 460 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 CACNA2D2Q9NY47 1150 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 DNMT3BQ9UBC3 853 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 SLC45A1Q9Y2W3 748 aa2.07□□□□□ -2.08
TRAPPC13-211ENST00000512009 ELP1O95163 1332 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 KIAA1549Q9HCM3 1950 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 DTNBO60941 627 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 ATF3P18847 181 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 PTH1RQ03431 593 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 CHAF1AQ13111 956 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 SLFNL1Q499Z3 407 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 C6orf89Q6UWU4 347 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 WAPLQ7Z5K2 1190 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 PAGR1Q9BTK6 254 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 UPF2Q9HAU5 1272 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 TLR7Q9NYK1 1049 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 FLT1P17948 1338 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 SPDYE2BA6NHP3 402 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 SPDYE6P0CI01 402 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 CYP19A1P11511 503 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 GABRB3P28472 473 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 NUBP1P53384 320 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 SPDYE2Q495Y8 402 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 KMT5BQ4FZB7 885 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAP4K1Q92918 833 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 DDX41Q9UJV9 622 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 EIF5BO60841 1220 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 TBC1D8O95759 1140 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 TMEM174Q8WUU8 243 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 POTEB2H3BUK9 544 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 CAMTA2O94983 1202 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 APPP05067 770 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 NBPF7P0C2Y1 421 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 FGFR1P11362 822 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 CANXP27824 592 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 KCNJ6P48051 423 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 E2F4Q16254 413 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 NAALADL2Q58DX5 795 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 SARM1Q6SZW1 724 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 TMC4Q7Z404 712 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF589Q86UQ0 364 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 SNRNP27Q8WVK2 155 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 TMEM59LQ9UK28 342 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 NEU2Q9Y3R4 380 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZANQ9Y493 2812 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 PDZD2O15018 2839 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 LRP4O75096 1905 aa2.06□□□□□ -2.08
TRAPPC13-211ENST00000512009 SRGNP10124 158 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 FGFR2P21802 821 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 IL6STP40189 918 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAP3K9P80192 1104 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 RESTQ13127 1097 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 LCE2DQ5TA82 110 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 PRPF38BQ5VTL8 546 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 SALL4Q9UJQ4 1053 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 TUBE1Q9UJT0 475 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 APC2O95996 2303 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 AOX1Q06278 1338 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 IGSF9BQ9UPX0 1349 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 SMYD5Q6GMV2 418 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 RCSD1Q6JBY9 416 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 B3GNT9Q6UX72 402 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 RNF111Q6ZNA4 994 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 FIZ1Q96SL8 496 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 MRVI1Q9Y6F6 885 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 EVC2Q86UK5 1308 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 A0A0G2JS52 829 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 E9PSI1 815 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 SGSM2O43147 1006 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 DDRGK1Q96HY6 314 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 BRIP1Q9BX63 1249 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 CARD11Q9BXL7 1154 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZSWIM6Q9HCJ5 1215 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 RAB21Q9UL25 225 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 HMGB3O15347 200 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 GSRP00390 522 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 CPP00450 1065 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 FXR1P51114 621 aaKnown RBP eCLIP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 HSP90AB2PQ58FF8 381 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 NOL9Q5SY16 702 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 ARMCX5Q6P1M9 558 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 WDR59Q6PJI9 974 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 GPR150Q8NGU9 434 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 SMARCC1Q92922 1105 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 EYA1Q99502 592 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 PARP3Q9Y6F1 533 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 SH3TC1Q8TE82 1336 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms