RNA–Protein interactions for RNA: ENST00000511097.6

CAST-235, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-235ENST00000511097 DDX4Q9NQI0 724 aaKnown RBP20.75■□□□□ 0.91
CAST-235ENST00000511097 LBX1P52954 281 aa20.74■□□□□ 0.91
CAST-235ENST00000511097 ADGRA1Q86SQ6 560 aa20.74■□□□□ 0.91
CAST-235ENST00000511097 AATFQ9NY61 560 aaKnown RBP eCLIP20.74■□□□□ 0.91
CAST-235ENST00000511097 ZNF112Q9UJU3 913 aa20.74■□□□□ 0.91
CAST-235ENST00000511097 NDUFB9Q9Y6M9 179 aa20.74■□□□□ 0.91
CAST-235ENST00000511097 CYP7A1P22680 504 aa20.73■□□□□ 0.91
CAST-235ENST00000511097 PICALMQ13492 652 aa20.73■□□□□ 0.91
CAST-235ENST00000511097 MIGA2Q7L4E1 593 aa20.73■□□□□ 0.91
CAST-235ENST00000511097 ZSCAN29Q8IWY8 852 aaPredicted RBP20.73■□□□□ 0.91
CAST-235ENST00000511097 TEX11Q8IYF3 940 aa20.73■□□□□ 0.91
CAST-235ENST00000511097 GPATCH3Q96I76 525 aa20.73■□□□□ 0.91
CAST-235ENST00000511097 HAUS7Q99871 368 aa20.73■□□□□ 0.91
CAST-235ENST00000511097 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
CAST-235ENST00000511097 ECHDC1Q9NTX5 307 aa20.73■□□□□ 0.91
CAST-235ENST00000511097 RNF186Q9NXI6 227 aa20.73■□□□□ 0.91
CAST-235ENST00000511097 SMARCA5O60264 1052 aaPredicted RBP20.72■□□□□ 0.91
CAST-235ENST00000511097 COL13A1Q5TAT6 717 aaPredicted RBP20.72■□□□□ 0.91
CAST-235ENST00000511097 SH3BP5LQ7L8J4 393 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 MAGEB6Q8N7X4 407 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 OPTNQ96CV9 577 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 ELP3Q9H9T3 547 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 DDTLA6NHG4 134 aaPredicted RBP20.72■□□□□ 0.91
CAST-235ENST00000511097 SPDYE5A6NIY4 337 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 GOLIM4O00461 696 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 TBC1D12O60347 775 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 ALDH1A1P00352 501 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 MKRN3Q13064 507 aaKnown RBP20.72■□□□□ 0.91
CAST-235ENST00000511097 ERO1BQ86YB8 467 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 SH3RF3Q8TEJ3 882 aaPredicted RBP20.72■□□□□ 0.91
CAST-235ENST00000511097 GCC1Q96CN9 775 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 DNAJC2Q99543 621 aaKnown RBP20.72■□□□□ 0.91
CAST-235ENST00000511097 DHX36Q9H2U1 1008 aaKnown RBP20.72■□□□□ 0.91
CAST-235ENST00000511097 BOLA2Q9H3K6 86 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 PAG1Q9NWQ8 432 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 SNCAIPQ9Y6H5 919 aa20.72■□□□□ 0.91
CAST-235ENST00000511097 NOL9Q5SY16 702 aaKnown RBP20.71■□□□□ 0.91
CAST-235ENST00000511097 CFHR5Q9BXR6 569 aa20.71■□□□□ 0.91
CAST-235ENST00000511097 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
CAST-235ENST00000511097 TESPA1A2RU30 521 aaPredicted RBP20.7■□□□□ 0.9
CAST-235ENST00000511097 TRPA1O75762 1119 aa20.7■□□□□ 0.9
CAST-235ENST00000511097 GJA5P36382 358 aa20.7■□□□□ 0.9
CAST-235ENST00000511097 SLC9C2Q5TAH2 1124 aa20.7■□□□□ 0.9
CAST-235ENST00000511097 ZKSCAN4Q969J2 545 aaPredicted RBP20.7■□□□□ 0.9
CAST-235ENST00000511097 PDE6AP16499 860 aa20.69■□□□□ 0.9
CAST-235ENST00000511097 PPATQ06203 517 aa20.69■□□□□ 0.9
CAST-235ENST00000511097 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.69■□□□□ 0.91e-17■□□□□ 8.2
CAST-235ENST00000511097 DOCK2Q92608 1830 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 FLT1P17948 1338 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 TTC41PQ6P2S7 1318 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 PHF20L1A8MW92 1017 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 INPP5BP32019 993 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 GTF2A2P52657 109 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 NOM1Q5C9Z4 860 aaKnown RBP20.68■□□□□ 0.9
CAST-235ENST00000511097 OTUD7BQ6GQQ9 843 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 IFNL1Q8IU54 200 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 TGFBRAP1Q8WUH2 860 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 MS4A4AQ96JQ5 239 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 PI4KBQ9UBF8 816 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 HERC5Q9UII4 1024 aaKnown RBP20.68■□□□□ 0.9
CAST-235ENST00000511097 OTOFQ9HC10 1997 aa20.68■□□□□ 0.9
CAST-235ENST00000511097 PPIL2Q13356 520 aa20.67■□□□□ 0.9
CAST-235ENST00000511097 MIGA1Q8NAN2 632 aa20.67■□□□□ 0.9
CAST-235ENST00000511097 OTUD5Q96G74 571 aa20.67■□□□□ 0.9
CAST-235ENST00000511097 RIOK1Q9BRS2 568 aaKnown RBP20.67■□□□□ 0.9
CAST-235ENST00000511097 RWDD1Q9H446 243 aaPredicted RBP20.67■□□□□ 0.9
CAST-235ENST00000511097 ZBTB47Q9UFB7 747 aaPredicted RBP20.67■□□□□ 0.9
CAST-235ENST00000511097 TSKSQ9UJT2 592 aa20.67■□□□□ 0.9
CAST-235ENST00000511097 LAMB1P07942 1786 aa20.66■□□□□ 0.9
CAST-235ENST00000511097 TCRBV5S4A2TA0A5A2 114 aa20.66■□□□□ 0.9
CAST-235ENST00000511097 CTNND1O60716 968 aaKnown RBP20.66■□□□□ 0.9
CAST-235ENST00000511097 ZSCAN25Q6NSZ9 544 aa20.66■□□□□ 0.9
CAST-235ENST00000511097 SCYL3Q8IZE3 742 aa20.66■□□□□ 0.9
CAST-235ENST00000511097 EXOC6Q8TAG9 804 aa20.66■□□□□ 0.9
CAST-235ENST00000511097 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
CAST-235ENST00000511097 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.66■□□□□ 0.9
CAST-235ENST00000511097 ZNF532Q9HCE3 1301 aa20.66■□□□□ 0.9
CAST-235ENST00000511097 MAGEB6P1A0A0J9YX57 407 aa20.65■□□□□ 0.9
CAST-235ENST00000511097 ERC2O15083 957 aa20.65■□□□□ 0.9
CAST-235ENST00000511097 ADD2P35612 726 aa20.65■□□□□ 0.9
CAST-235ENST00000511097 DYNLL1P63167 89 aaKnown RBP20.65■□□□□ 0.9
CAST-235ENST00000511097 UBE3CQ15386 1083 aa20.65■□□□□ 0.9
CAST-235ENST00000511097 METTL16Q86W50 562 aaKnown RBP20.65■□□□□ 0.9
CAST-235ENST00000511097 CNKSR2Q8WXI2 1034 aa20.65■□□□□ 0.9
CAST-235ENST00000511097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.65■□□□□ 0.9
CAST-235ENST00000511097 IRF6O14896 467 aa20.64■□□□□ 0.89
CAST-235ENST00000511097 SNAPC2Q13487 334 aa20.64■□□□□ 0.89
CAST-235ENST00000511097 FOXP4Q8IVH2 680 aaPredicted RBP20.64■□□□□ 0.89
CAST-235ENST00000511097 MAPKAPK5Q8IW41 473 aa20.64■□□□□ 0.89
CAST-235ENST00000511097 IGF2BP3O00425 579 aaKnown RBP eCLIP20.63■□□□□ 0.89
CAST-235ENST00000511097 GLRX3O76003 335 aaKnown RBP20.63■□□□□ 0.89
CAST-235ENST00000511097 CETPP11597 493 aa20.63■□□□□ 0.89
CAST-235ENST00000511097 USP5P45974 858 aa20.63■□□□□ 0.89
CAST-235ENST00000511097 ANKRD45Q5TZF3 282 aa20.63■□□□□ 0.89
CAST-235ENST00000511097 SMC5Q8IY18 1101 aa20.63■□□□□ 0.89
CAST-235ENST00000511097 TNS4Q8IZW8 715 aa20.63■□□□□ 0.89
CAST-235ENST00000511097 ZCCHC17Q9NP64 241 aaKnown RBP20.63■□□□□ 0.89
CAST-235ENST00000511097 PICK1Q9NRD5 415 aa20.63■□□□□ 0.89
CAST-235ENST00000511097 KCNH4Q9UQ05 1017 aa20.63■□□□□ 0.89
CAST-235ENST00000511097 CCL15-CCL14A0A0B4J2E2 113 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms