RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 DYNLL1P63167 89 aaKnown RBP10.34□□□□□ -0.75
NFKB1-209ENST00000510638 KIF4BQ2VIQ3 1234 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
NFKB1-209ENST00000510638 APOBEC3HQ6NTF7 200 aaKnown RBP10.34□□□□□ -0.75
NFKB1-209ENST00000510638 CCDC129Q6ZRS4 1044 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 ZNF589Q86UQ0 364 aaPredicted RBP10.34□□□□□ -0.75
NFKB1-209ENST00000510638 TEX11Q8IYF3 940 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 LCORLQ8N3X6 602 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 TAF1DQ9H5J8 278 aaPredicted RBP10.34□□□□□ -0.75
NFKB1-209ENST00000510638 ATP8A2Q9NTI2 1148 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 USP40Q9NVE5 1235 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 CTNNA3Q9UI47 895 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 HACL1Q9UJ83 578 aa10.34□□□□□ -0.75
NFKB1-209ENST00000510638 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
NFKB1-209ENST00000510638 TDO2P48775 406 aa10.33□□□□□ -0.76
NFKB1-209ENST00000510638 TNFAIP1Q13829 316 aa10.33□□□□□ -0.76
NFKB1-209ENST00000510638 HABP4Q5JVS0 413 aaKnown RBP10.33□□□□□ -0.76
NFKB1-209ENST00000510638 RNF20Q5VTR2 975 aa10.33□□□□□ -0.76
NFKB1-209ENST00000510638 GIMAP6Q6P9H5 292 aa10.33□□□□□ -0.76
NFKB1-209ENST00000510638 PNMA8AQ86V59 439 aaPredicted RBP10.33□□□□□ -0.76
NFKB1-209ENST00000510638 SH3RF3Q8TEJ3 882 aaPredicted RBP10.33□□□□□ -0.76
NFKB1-209ENST00000510638 NAPBQ9H115 298 aa10.33□□□□□ -0.76
NFKB1-209ENST00000510638 ADARB2Q9NS39 739 aaKnown RBP10.33□□□□□ -0.76
NFKB1-209ENST00000510638 HSPD1P10809 573 aaKnown RBP10.32□□□□□ -0.76
NFKB1-209ENST00000510638 TNNI2P48788 182 aa10.32□□□□□ -0.76
NFKB1-209ENST00000510638 SOX10P56693 466 aa10.32□□□□□ -0.76
NFKB1-209ENST00000510638 TBC1D10BQ4KMP7 808 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-209ENST00000510638 CDC42EP5Q6NZY7 148 aa10.32□□□□□ -0.76
NFKB1-209ENST00000510638 SAMD7Q7Z3H4 446 aa10.32□□□□□ -0.76
NFKB1-209ENST00000510638 PRMT6Q96LA8 375 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-209ENST00000510638 LSG1Q9H089 658 aaKnown RBP10.32□□□□□ -0.76
NFKB1-209ENST00000510638 IL25Q9H293 177 aa10.32□□□□□ -0.76
NFKB1-209ENST00000510638 ZMYM6O95789 1325 aa10.32□□□□□ -0.76
NFKB1-209ENST00000510638 GSG1L2A8MUP6 293 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 WNT10BO00744 389 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 PRKAB2O43741 272 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 ZKSCAN1P17029 563 aaPredicted RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 EPHX2P34913 555 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 EPS15P42566 896 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 RHBDL3P58872 404 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 ALX1Q15699 326 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 IMMTQ16891 758 aaKnown RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 VPS53Q5VIR6 699 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 FKBP1CQ5VVH2 108 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 USP50Q70EL3 339 aaPredicted RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 IFNL3Q8IZI9 196 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 TGFBRAP1Q8WUH2 860 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 SDR42E1Q8WUS8 393 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 MAP4K1Q92918 833 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 ZBED3Q96IU2 234 aaPredicted RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 IDI2Q9BXS1 227 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 TDRD3Q9H7E2 651 aaKnown RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 VEZTQ9HBM0 779 aa10.31□□□□□ -0.76
NFKB1-209ENST00000510638 DCP1AQ9NPI6 582 aaPredicted RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 ARPP21Q9UBL0 812 aaPredicted RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 ZNF70Q9UC06 446 aaPredicted RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 RBM8AQ9Y5S9 174 aaKnown RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 RBBP6Q7Z6E9 1792 aaKnown RBP10.31□□□□□ -0.76
NFKB1-209ENST00000510638 MAST2Q6P0Q8 1798 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 CLRN2A0PK11 232 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 ENTPD3O75355 529 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 FGAP02671 866 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 POLR3DP05423 398 aaPredicted RBP10.3□□□□□ -0.76
NFKB1-209ENST00000510638 HLA-DOAP06340 250 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 SLC3A2P08195 630 aaKnown RBP10.3□□□□□ -0.76
NFKB1-209ENST00000510638 PTH1RQ03431 593 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 PICALMQ13492 652 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 NBPF9Q3BBW0 867 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 APOBEC3FQ8IUX4 373 aaKnown RBP10.3□□□□□ -0.76
NFKB1-209ENST00000510638 MAPKAPK5Q8IW41 473 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 USP26Q9BXU7 913 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 MCM9Q9NXL9 1143 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 PCDHAC2Q9Y5I4 1007 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 FLT1P17948 1338 aa10.3□□□□□ -0.76
NFKB1-209ENST00000510638 SCN9AQ15858 1988 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 TCP10L2B9ZVM9 353 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 DLL1O00548 723 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 ZNF213O14771 459 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 WDHD1O75717 1129 aaPredicted RBP10.29□□□□□ -0.76
NFKB1-209ENST00000510638 SEC24BO95487 1268 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 TCP10Q12799 353 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 EAPPQ56P03 285 aaPredicted RBP10.29□□□□□ -0.76
NFKB1-209ENST00000510638 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
NFKB1-209ENST00000510638 TTC6Q86TZ1 520 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 FAM83AQ86UY5 434 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 ZSCAN29Q8IWY8 852 aaPredicted RBP10.29□□□□□ -0.76
NFKB1-209ENST00000510638 TRPM4Q8TD43 1214 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 ZC3H15Q8WU90 426 aaKnown RBP10.29□□□□□ -0.76
NFKB1-209ENST00000510638 DCPSQ96C86 337 aaKnown RBP10.29□□□□□ -0.76
NFKB1-209ENST00000510638 C22orf23Q9BZE7 217 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 DHX36Q9H2U1 1008 aaKnown RBP10.29□□□□□ -0.76
NFKB1-209ENST00000510638 ZNF287Q9HBT7 754 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 CLEC11AQ9Y240 323 aa10.29□□□□□ -0.76
NFKB1-209ENST00000510638 CEP290O15078 2479 aa10.28□□□□□ -0.76
NFKB1-209ENST00000510638 MINDY4BA8MYZ0 360 aa10.28□□□□□ -0.76
NFKB1-209ENST00000510638 USP17L12C9JPN9 530 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms