RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 MIGA2Q7L4E1 593 aa14.29□□□□□ -0.12
HMGXB3-203ENST00000510472 SMC5Q8IY18 1101 aa14.29□□□□□ -0.12
HMGXB3-203ENST00000510472 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
HMGXB3-203ENST00000510472 MAGEB6Q8N7X4 407 aa14.29□□□□□ -0.12
HMGXB3-203ENST00000510472 PAG1Q9NWQ8 432 aa14.29□□□□□ -0.12
HMGXB3-203ENST00000510472 AATFQ9NY61 560 aaKnown RBP eCLIP14.29□□□□□ -0.12
HMGXB3-203ENST00000510472 SALL3Q9BXA9 1300 aa14.29□□□□□ -0.12
HMGXB3-203ENST00000510472 PHF20L1A8MW92 1017 aa14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 ZBTB48P10074 688 aaPredicted RBP14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 PDE6AP16499 860 aa14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 VGLL4Q14135 290 aa14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 SLC9C2Q5TAH2 1124 aa14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 OTUD7AQ8TE49 926 aaPredicted RBP14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 WNK4Q96J92 1243 aa14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 DNAJC2Q99543 621 aaKnown RBP14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 RIOK1Q9BRS2 568 aaKnown RBP14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 OSBPL5Q9H0X9 879 aaPredicted RBP14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
HMGXB3-203ENST00000510472 CA12O43570 354 aa14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 TBC1D12O60347 775 aa14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 HSPA8P11142 646 aaKnown RBP14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 DYNLL1P63167 89 aaKnown RBP14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 PICALMQ13492 652 aa14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 CERS3Q8IU89 383 aa14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 TEX11Q8IYF3 940 aa14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 ZKSCAN4Q969J2 545 aaPredicted RBP14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 ZNF341Q9BYN7 854 aa14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 RWDD1Q9H446 243 aaPredicted RBP14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 SNCAIPQ9Y6H5 919 aa14.27□□□□□ -0.13
HMGXB3-203ENST00000510472 COL2A1P02458 1487 aaPredicted RBP14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 TTC41PQ6P2S7 1318 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 MYH2Q9UKX2 1941 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 SLURP2P0DP57 97 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 INPP5BP32019 993 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 ADD2P35612 726 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 TSHZ3Q63HK5 1081 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 METTL16Q86W50 562 aaKnown RBP14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 MIGA1Q8NAN2 632 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 PI4K2BQ8TCG2 481 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 AIDAQ96BJ3 306 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 WRNIP1Q96S55 665 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 NOL10Q9BSC4 688 aaKnown RBP14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 RNF186Q9NXI6 227 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 STAP2Q9UGK3 403 aa14.26□□□□□ -0.13
HMGXB3-203ENST00000510472 ZNF532Q9HCE3 1301 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 SPDYE5A6NIY4 337 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 INHBEP58166 350 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 MKRN3Q13064 507 aaKnown RBP14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 UBE3CQ15386 1083 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 SLFNL1Q499Z3 407 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 NOL9Q5SY16 702 aaKnown RBP14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 TGFBRAP1Q8WUH2 860 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 OPTNQ96CV9 577 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 BEGAINQ9BUH8 593 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 ELP3Q9H9T3 547 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 PRDM10Q9NQV6 1147 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 SAGE1Q9NXZ1 904 aa14.25□□□□□ -0.13
HMGXB3-203ENST00000510472 FLT1P17948 1338 aa14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 MANSC4A6NHS7 340 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 CHGBP05060 677 aa14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 LBX1P52954 281 aa14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 ERO1BQ86YB8 467 aa14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 ZSCAN29Q8IWY8 852 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 KBTBD3Q8NAB2 608 aa14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 GPATCH3Q96I76 525 aa14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 DHX36Q9H2U1 1008 aaKnown RBP14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 CSADQ9Y600 493 aa14.24□□□□□ -0.13
HMGXB3-203ENST00000510472 MAGEB6P1A0A0J9YX57 407 aa14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 GLRX3O76003 335 aaKnown RBP14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 MX1P20591 662 aa14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 NUCB1Q02818 461 aa14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 MAPKAPK5Q8IW41 473 aa14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 PTPN18Q99952 460 aa14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 CFHR5Q9BXR6 569 aa14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 PI4KBQ9UBF8 816 aa14.23□□□□□ -0.13
HMGXB3-203ENST00000510472 CTNND1O60716 968 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 TRPA1O75762 1119 aa14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 SLC34A2O95436 690 aa14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 PPATQ06203 517 aa14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 SREBF2Q12772 1141 aa14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 RRP1BQ14684 758 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.22□□□□□ -0.138e-7■■□□□ 11.7
HMGXB3-203ENST00000510472 HERC5Q9UII4 1024 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 TSKSQ9UJT2 592 aa14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 PALD1Q9ULE6 856 aa14.22□□□□□ -0.13
HMGXB3-203ENST00000510472 IGF2BP3O00425 579 aaKnown RBP eCLIP14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 IRF6O14896 467 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 ERC2O15083 957 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 PDE1AP54750 535 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 PPIL2Q13356 520 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 ZSCAN25Q6NSZ9 544 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 SCYL3Q8IZE3 742 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms