RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
DDX41-211ENST00000510171 GABRQQ9UN88 632 aa12.95□□□□□ -0.34
DDX41-211ENST00000510171 SLC45A1Q9Y2W3 748 aa12.95□□□□□ -0.34
DDX41-211ENST00000510171 AFG3L2Q9Y4W6 797 aa12.95□□□□□ -0.34
DDX41-211ENST00000510171 NR2E3Q9Y5X4 410 aa12.95□□□□□ -0.34
DDX41-211ENST00000510171 LRRFIP2Q9Y608 721 aaKnown RBP12.95□□□□□ -0.34
DDX41-211ENST00000510171 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
DDX41-211ENST00000510171 ARAP2Q8WZ64 1704 aa12.94□□□□□ -0.34
DDX41-211ENST00000510171 ZBTB22O15209 634 aa12.94□□□□□ -0.34
DDX41-211ENST00000510171 CTNND1O60716 968 aaKnown RBP12.94□□□□□ -0.34
DDX41-211ENST00000510171 SGPL1O95470 568 aa12.94□□□□□ -0.34
DDX41-211ENST00000510171 MAP3K10Q02779 954 aa12.94□□□□□ -0.34
DDX41-211ENST00000510171 CCDC102BQ68D86 513 aa12.94□□□□□ -0.34
DDX41-211ENST00000510171 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
DDX41-211ENST00000510171 DZIP1Q86YF9 867 aaKnown RBP12.94□□□□□ -0.34
DDX41-211ENST00000510171 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
DDX41-211ENST00000510171 FAM163AQ96GL9 167 aaPredicted RBP12.94□□□□□ -0.34
DDX41-211ENST00000510171 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
DDX41-211ENST00000510171 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
DDX41-211ENST00000510171 GAKO14976 1311 aa12.93□□□□□ -0.34
DDX41-211ENST00000510171 ADCY3O60266 1144 aa12.93□□□□□ -0.34
DDX41-211ENST00000510171 FARP2O94887 1054 aaPredicted RBP12.93□□□□□ -0.34
DDX41-211ENST00000510171 FLT3LGP49771 235 aa12.93□□□□□ -0.34
DDX41-211ENST00000510171 SPTY2D1Q68D10 685 aaPredicted RBP12.93□□□□□ -0.34
DDX41-211ENST00000510171 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
DDX41-211ENST00000510171 SMCR8Q8TEV9 937 aaPredicted RBP12.93□□□□□ -0.34
DDX41-211ENST00000510171 UNC93B1Q9H1C4 597 aa12.93□□□□□ -0.34
DDX41-211ENST00000510171 PA2G4Q9UQ80 394 aaKnown RBP12.93□□□□□ -0.34
DDX41-211ENST00000510171 ATRNL1Q5VV63 1379 aa12.93□□□□□ -0.34
DDX41-211ENST00000510171 CENPFP49454 3210 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
DDX41-211ENST00000510171 TRIM75PA6NK02 468 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 TNPO2O14787 897 aaKnown RBP12.92□□□□□ -0.34
DDX41-211ENST00000510171 TFRCP02786 760 aaKnown RBP12.92□□□□□ -0.34
DDX41-211ENST00000510171 CAPN2P17655 700 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 ADORA1P30542 326 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 BTDP43251 543 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 TIMM10P62072 90 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 PICALMQ13492 652 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 IRF5Q13568 498 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 COPRSQ9NQ92 184 aa12.92□□□□□ -0.34
DDX41-211ENST00000510171 NOB1Q9ULX3 412 aaKnown RBP12.92□□□□□ -0.34
DDX41-211ENST00000510171 INHAP05111 366 aa12.91□□□□□ -0.34
DDX41-211ENST00000510171 SLURP2P0DP57 97 aa12.91□□□□□ -0.34
DDX41-211ENST00000510171 ELNP15502 786 aa12.91□□□□□ -0.34
DDX41-211ENST00000510171 RASGRF1Q13972 1273 aa12.91□□□□□ -0.34
DDX41-211ENST00000510171 COA7Q96BR5 231 aa12.91□□□□□ -0.34
DDX41-211ENST00000510171 API5Q9BZZ5 524 aaKnown RBP12.91□□□□□ -0.34
DDX41-211ENST00000510171 DDX4Q9NQI0 724 aaKnown RBP12.91□□□□□ -0.34
DDX41-211ENST00000510171 AGTPBP1Q9UPW5 1226 aa12.91□□□□□ -0.34
DDX41-211ENST00000510171 PDS5AQ29RF7 1337 aaKnown RBP12.9□□□□□ -0.34
DDX41-211ENST00000510171 GPR75-ASB3A0A0A6YYF3 556 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
DDX41-211ENST00000510171 TBC1D12O60347 775 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 EVI5O60447 810 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 ANKRD13CQ8N6S4 541 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 XAGE2Q96GT9 111 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 DEFB118Q96PH6 123 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 PNMA3Q9UL41 463 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
DDX41-211ENST00000510171 MROH7-TTC4A0A0A0MT08 1334 aa12.89□□□□□ -0.35
DDX41-211ENST00000510171 A0A1B0GUL7 405 aa12.89□□□□□ -0.35
DDX41-211ENST00000510171 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
DDX41-211ENST00000510171 RHBDL3P58872 404 aa12.89□□□□□ -0.35
DDX41-211ENST00000510171 MECOMQ03112 1051 aa12.89□□□□□ -0.35
DDX41-211ENST00000510171 MVPQ14764 893 aaKnown RBP12.89□□□□□ -0.35
DDX41-211ENST00000510171 CCDC84Q86UT8 332 aaPredicted RBP12.89□□□□□ -0.35
DDX41-211ENST00000510171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX41-211ENST00000510171 BRCA2P51587 3418 aa12.89□□□□□ -0.35
DDX41-211ENST00000510171 LDHCP07864 332 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
DDX41-211ENST00000510171 GSTO1P78417 241 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 TFCP2Q12800 502 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 SPP2Q13103 211 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
DDX41-211ENST00000510171 NEUROD6Q96NK8 337 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 MEIS3Q99687 375 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 CRISPLD2Q9H0B8 497 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
DDX41-211ENST00000510171 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
DDX41-211ENST00000510171 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
DDX41-211ENST00000510171 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
DDX41-211ENST00000510171 SRGAP3O43295 1099 aa12.87□□□□□ -0.35
DDX41-211ENST00000510171 MAP4K4O95819 1239 aaPredicted RBP12.87□□□□□ -0.35
DDX41-211ENST00000510171 GNAI3P08754 354 aa12.87□□□□□ -0.35
DDX41-211ENST00000510171 GCLCP48506 637 aaPredicted RBP12.87□□□□□ -0.35
DDX41-211ENST00000510171 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
DDX41-211ENST00000510171 FAM110CQ1W6H9 321 aa12.87□□□□□ -0.35
DDX41-211ENST00000510171 GORABQ5T7V8 394 aa12.87□□□□□ -0.35
DDX41-211ENST00000510171 TRMT2AQ8IZ69 625 aaKnown RBP12.87□□□□□ -0.35
DDX41-211ENST00000510171 ZNF280CQ8ND82 737 aa12.87□□□□□ -0.35
DDX41-211ENST00000510171 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
DDX41-211ENST00000510171 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
DDX41-211ENST00000510171 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms