RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 NEURL1BA8MQ27 555 aa13.83□□□□□ -0.2
SNF8-207ENST00000509995 APOBEC3HQ6NTF7 200 aaKnown RBP13.83□□□□□ -0.2
SNF8-207ENST00000509995 ALYREFQ86V81 257 aaKnown RBP13.83□□□□□ -0.2
SNF8-207ENST00000509995 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
SNF8-207ENST00000509995 LRFN3Q9BTN0 628 aa13.83□□□□□ -0.2
SNF8-207ENST00000509995 LOC285556D6RIA3 1793 aa13.83□□□□□ -0.2
SNF8-207ENST00000509995 RLFQ13129 1914 aa13.82□□□□□ -0.2
SNF8-207ENST00000509995 NEXNQ0ZGT2 675 aa13.82□□□□□ -0.2
SNF8-207ENST00000509995 FAM151AQ8WW52 585 aa13.82□□□□□ -0.2
SNF8-207ENST00000509995 SENP6Q9GZR1 1112 aaPredicted RBP13.82□□□□□ -0.2
SNF8-207ENST00000509995 AGTPBP1Q9UPW5 1226 aa13.82□□□□□ -0.2
SNF8-207ENST00000509995 AFG3L2Q9Y4W6 797 aa13.82□□□□□ -0.2
SNF8-207ENST00000509995 PI4KAP2A4QPH2 592 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 PTPRAP18433 802 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 HIBADHP31937 336 aaKnown RBP13.81□□□□□ -0.2
SNF8-207ENST00000509995 GYG1P46976 350 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
SNF8-207ENST00000509995 KSR2Q6VAB6 950 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 SCYL3Q8IZE3 742 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 PI4KAP1Q8N8J0 262 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 PPM1EQ8WY54 764 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 PICK1Q9NRD5 415 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 PNMA3Q9UL41 463 aa13.81□□□□□ -0.2
SNF8-207ENST00000509995 CYP2B6P20813 491 aa13.8□□□□□ -0.2
SNF8-207ENST00000509995 CCND3P30281 292 aaPredicted RBP13.8□□□□□ -0.2
SNF8-207ENST00000509995 CASP7P55210 303 aa13.8□□□□□ -0.2
SNF8-207ENST00000509995 RTP1P59025 263 aa13.8□□□□□ -0.2
SNF8-207ENST00000509995 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
SNF8-207ENST00000509995 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
SNF8-207ENST00000509995 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
SNF8-207ENST00000509995 FAM84BQ96KN1 310 aaPredicted RBP13.8□□□□□ -0.2
SNF8-207ENST00000509995 NECAB3Q96P71 396 aaPredicted RBP13.8□□□□□ -0.2
SNF8-207ENST00000509995 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
SNF8-207ENST00000509995 TRIM35Q9UPQ4 493 aa13.8□□□□□ -0.2
SNF8-207ENST00000509995 PLIN1O60240 522 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
SNF8-207ENST00000509995 DNAJB2P25686 324 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 GCLCP48506 637 aaPredicted RBP13.79□□□□□ -0.2
SNF8-207ENST00000509995 TCP10Q12799 353 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 IFIT5Q13325 482 aaKnown RBP13.79□□□□□ -0.2
SNF8-207ENST00000509995 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 POTEEQ6S8J3 1075 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 TBC1D22AQ8WUA7 517 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 BADQ92934 168 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 RNPC3Q96LT9 517 aaKnown RBP13.79□□□□□ -0.2
SNF8-207ENST00000509995 ZNF576Q9H609 170 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 ATRNL1Q5VV63 1379 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 CHD9Q3L8U1 2897 aa13.79□□□□□ -0.2
SNF8-207ENST00000509995 TRIM75PA6NK02 468 aa13.78□□□□□ -0.2
SNF8-207ENST00000509995 PHF20L1A8MW92 1017 aa13.78□□□□□ -0.2
SNF8-207ENST00000509995 ZKSCAN1P17029 563 aaPredicted RBP13.78□□□□□ -0.2
SNF8-207ENST00000509995 PDE3AQ14432 1141 aa13.78□□□□□ -0.2
SNF8-207ENST00000509995 TRMT44Q8IYL2 757 aaKnown RBP13.78□□□□□ -0.2
SNF8-207ENST00000509995 SOCS4Q8WXH5 440 aa13.78□□□□□ -0.2
SNF8-207ENST00000509995 GAS2L1Q99501 681 aaPredicted RBP13.78□□□□□ -0.2
SNF8-207ENST00000509995 PRDM5Q9NQX1 630 aaPredicted RBP13.78□□□□□ -0.2
SNF8-207ENST00000509995 MAST3O60307 1309 aa13.78□□□□□ -0.2
SNF8-207ENST00000509995 CHD7Q9P2D1 2997 aa13.77□□□□□ -0.2
SNF8-207ENST00000509995 CHAF1AQ13111 956 aaPredicted RBP13.77□□□□□ -0.21
SNF8-207ENST00000509995 UBE4AQ14139 1066 aa13.77□□□□□ -0.21
SNF8-207ENST00000509995 GCKRQ14397 625 aa13.77□□□□□ -0.21
SNF8-207ENST00000509995 TMEM31Q5JXX7 168 aa13.77□□□□□ -0.21
SNF8-207ENST00000509995 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.21
SNF8-207ENST00000509995 NUDT12Q9BQG2 462 aa13.77□□□□□ -0.21
SNF8-207ENST00000509995 IQSEC3Q9UPP2 1182 aaPredicted RBP13.77□□□□□ -0.21
SNF8-207ENST00000509995 ATP11BQ9Y2G3 1177 aa13.77□□□□□ -0.21
SNF8-207ENST00000509995 MYH13Q9UKX3 1938 aa13.76□□□□□ -0.21
SNF8-207ENST00000509995 ELL2O00472 640 aaPredicted RBP13.76□□□□□ -0.21
SNF8-207ENST00000509995 NFIAQ12857 509 aa13.76□□□□□ -0.21
SNF8-207ENST00000509995 CHMP3Q9Y3E7 222 aa13.76□□□□□ -0.21
SNF8-207ENST00000509995 WDFY4Q6ZS81 3184 aa13.76□□□□□ -0.21
SNF8-207ENST00000509995 DNM1LO00429 736 aa13.75□□□□□ -0.21
SNF8-207ENST00000509995 LDHAL6AQ6ZMR3 332 aa13.75□□□□□ -0.21
SNF8-207ENST00000509995 PROCA1Q8NCQ7 364 aaPredicted RBP13.75□□□□□ -0.21
SNF8-207ENST00000509995 EPHX3Q9H6B9 360 aa13.75□□□□□ -0.21
SNF8-207ENST00000509995 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
SNF8-207ENST00000509995 PDLIM7Q9NR12 457 aa13.75□□□□□ -0.21
SNF8-207ENST00000509995 MORF4L1Q9UBU8 362 aa13.75□□□□□ -0.21
SNF8-207ENST00000509995 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 MRE11P49959 708 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 CCL14Q16627 93 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 VPS37DQ86XT2 251 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 TIFAQ96CG3 184 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 ZNF594Q96JF6 807 aaPredicted RBP13.74□□□□□ -0.21
SNF8-207ENST00000509995 P2RX7Q99572 595 aaKnown RBP13.74□□□□□ -0.21
SNF8-207ENST00000509995 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.74□□□□□ -0.21
SNF8-207ENST00000509995 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 SUGT1Q9Y2Z0 365 aa13.74□□□□□ -0.21
SNF8-207ENST00000509995 FRAT2O75474 233 aaPredicted RBP13.73□□□□□ -0.21
SNF8-207ENST00000509995 BMP1P13497 986 aa13.73□□□□□ -0.21
SNF8-207ENST00000509995 FOXO4P98177 505 aa13.73□□□□□ -0.21
SNF8-207ENST00000509995 CCDC85BQ15834 202 aaPredicted RBP13.73□□□□□ -0.21
SNF8-207ENST00000509995 FBXO33Q7Z6M2 555 aa13.73□□□□□ -0.21
SNF8-207ENST00000509995 CCDC84Q86UT8 332 aaPredicted RBP13.73□□□□□ -0.21
SNF8-207ENST00000509995 LPAR1Q92633 364 aa13.73□□□□□ -0.21
SNF8-207ENST00000509995 USP6NLQ92738 828 aa13.73□□□□□ -0.21
SNF8-207ENST00000509995 ASCC2Q9H1I8 757 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms