RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	LTBP2	Q14767	1821 aa		12.51	□□□□□ -0.41
PTPN20-223	ENST00000509900	PDHX	O00330	501 aa		12.51	□□□□□ -0.41
PTPN20-223	ENST00000509900	ANKRD23	Q86SG2	305 aa		12.51	□□□□□ -0.41
PTPN20-223	ENST00000509900	DDX27	Q96GQ7	796 aa	Known RBP	12.51	□□□□□ -0.41
PTPN20-223	ENST00000509900	CHPF2	Q9P2E5	772 aa		12.51	□□□□□ -0.41
PTPN20-223	ENST00000509900	PDE8A	O60658	829 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	PPIL2	Q13356	520 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	TNFAIP1	Q13829	316 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	USP38	Q8NB14	1042 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	JARID2	Q92833	1246 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	SNX27	Q96L92	541 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	TMEM39B	Q9GZU3	492 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	C11orf49	Q9H6J7	331 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	BSDC1	Q9NW68	430 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	ZNF70	Q9UC06	446 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	VPS9D1	Q9Y2B5	631 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	MAST2	Q6P0Q8	1798 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	MYO9B	Q13459	2157 aa		12.5	□□□□□ -0.41
PTPN20-223	ENST00000509900	MUC6	Q6W4X9	2439 aa		12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	PFAS	O15067	1338 aa		12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	FOSB	P53539	338 aa		12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	IRF5	Q13568	498 aa		12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	ZKSCAN4	Q969J2	545 aa	Predicted RBP	12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	TTYH1	Q9H313	450 aa	Predicted RBP	12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	CD209	Q9NNX6	404 aa		12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	LEMD3	Q9Y2U8	911 aa		12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	TCF20	Q9UGU0	1960 aa	Known RBP	12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	PTPRF	P10586	1907 aa		12.49	□□□□□ -0.41
PTPN20-223	ENST00000509900	HSP90B1	P14625	803 aa	Known RBP	12.48	□□□□□ -0.41
PTPN20-223	ENST00000509900	FOSL2	P15408	326 aa		12.48	□□□□□ -0.41
PTPN20-223	ENST00000509900	RBM5	P52756	815 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
PTPN20-223	ENST00000509900	MOGS	Q13724	837 aa		12.48	□□□□□ -0.41
PTPN20-223	ENST00000509900	KRT24	Q2M2I5	525 aa		12.48	□□□□□ -0.41
PTPN20-223	ENST00000509900	CDC5L	Q99459	802 aa	Known RBP	12.48	□□□□□ -0.41
PTPN20-223	ENST00000509900	TDRD3	Q9H7E2	651 aa	Known RBP	12.48	□□□□□ -0.41
PTPN20-223	ENST00000509900	PCCA	P05165	728 aa	Predicted RBP	12.47	□□□□□ -0.41
PTPN20-223	ENST00000509900	NFE2L2	Q16236	605 aa		12.47	□□□□□ -0.41
PTPN20-223	ENST00000509900	WRNIP1	Q96S55	665 aa		12.47	□□□□□ -0.41
PTPN20-223	ENST00000509900	FRMPD3	Q5JV73	1810 aa		12.46	□□□□□ -0.41
PTPN20-223	ENST00000509900	TCP10L2	B9ZVM9	353 aa		12.46	□□□□□ -0.41
PTPN20-223	ENST00000509900	CYP2C8	P10632	490 aa		12.46	□□□□□ -0.41
PTPN20-223	ENST00000509900	PTPRE	P23469	700 aa		12.46	□□□□□ -0.41
PTPN20-223	ENST00000509900	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.46	□□□□□ -0.41
PTPN20-223	ENST00000509900	PLXNB2	O15031	1838 aa		12.46	□□□□□ -0.42
PTPN20-223	ENST00000509900	CTSW	P56202	376 aa		12.45	□□□□□ -0.42
PTPN20-223	ENST00000509900	PPAT	Q06203	517 aa		12.45	□□□□□ -0.42
PTPN20-223	ENST00000509900	PLEKHF1	Q96S99	279 aa		12.45	□□□□□ -0.42
PTPN20-223	ENST00000509900	PARK7	Q99497	189 aa	Known RBP	12.45	□□□□□ -0.42
PTPN20-223	ENST00000509900	GREM2	Q9H772	168 aa		12.45	□□□□□ -0.42
PTPN20-223	ENST00000509900	OGDHL	Q9ULD0	1010 aa		12.45	□□□□□ -0.42
PTPN20-223	ENST00000509900	JAG2	Q9Y219	1238 aa		12.45	□□□□□ -0.42
PTPN20-223	ENST00000509900	TNPO2	O14787	897 aa	Known RBP	12.44	□□□□□ -0.42
PTPN20-223	ENST00000509900	FKBP1A	P62942	108 aa	Known RBP	12.44	□□□□□ -0.42
PTPN20-223	ENST00000509900	LRRC26	Q2I0M4	334 aa		12.44	□□□□□ -0.42
PTPN20-223	ENST00000509900	GPAT2	Q6NUI2	795 aa		12.44	□□□□□ -0.42
PTPN20-223	ENST00000509900	TTLL11	Q8NHH1	800 aa		12.44	□□□□□ -0.42
PTPN20-223	ENST00000509900	KCNH4	Q9UQ05	1017 aa		12.44	□□□□□ -0.42
PTPN20-223	ENST00000509900	CACNA1A	O00555	2505 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	SNAP23	O00161	211 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	COL6A1	P12109	1028 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	TRIM32	Q13049	653 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	MFSD10	Q14728	455 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	CCDC191	Q8NCU4	936 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	ADAMTS19	Q8TE59	1207 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	ZDHHC16	Q969W1	377 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	BABAM1	Q9NWV8	329 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	TIMELESS	Q9UNS1	1208 aa		12.43	□□□□□ -0.42
PTPN20-223	ENST00000509900	NEFM	P07197	916 aa		12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	IL1R1	P14778	569 aa		12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	TNNI2	P48788	182 aa		12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	HDGFL1	Q5TGJ6	251 aa		12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	DZIP1L	Q8IYY4	767 aa	Known RBP	12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	MYD88	Q99836	296 aa		12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	ADAM33	Q9BZ11	813 aa		12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	DBF4	Q9UBU7	674 aa	Predicted RBP	12.42	□□□□□ -0.42
PTPN20-223	ENST00000509900	HMGCR	P04035	888 aa		12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	INPP5B	P32019	993 aa		12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	PTPN5	P54829	565 aa		12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	SHH	Q15465	462 aa		12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	RIC3	Q7Z5B4	369 aa		12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	SLC4A5	Q9BY07	1137 aa		12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	ANKRD2	Q9GZV1	360 aa		12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	HMX1	Q9NP08	348 aa	Predicted RBP	12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	CWC25	Q9NXE8	425 aa	Predicted RBP	12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	SERPINA10	Q9UK55	444 aa		12.41	□□□□□ -0.42
PTPN20-223	ENST00000509900	PHIP	Q8WWQ0	1821 aa		12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	PPP2R1A	P30153	589 aa		12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	CACNB3	P54284	484 aa		12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	SMAD3	P84022	425 aa	Known RBP	12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	C9orf50	Q5SZB4	431 aa		12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	C15orf52	Q6ZUT6	534 aa	Known RBP	12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	ASB2	Q96Q27	587 aa		12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	UHRF1	Q96T88	793 aa	Predicted RBP	12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	C1QTNF1	Q9BXJ1	281 aa		12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	HYPK	Q9NX55	129 aa		12.4	□□□□□ -0.42
PTPN20-223	ENST00000509900	TTF2	Q9UNY4	1162 aa	Known RBP	12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms