RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 DHX37Q8IY37 1157 aaKnown RBP6.7□□□□□ -1.34
NIPBL-206ENST00000509429 SMYD4Q8IYR2 804 aaPredicted RBP6.7□□□□□ -1.34
NIPBL-206ENST00000509429 SLC16A11Q8NCK7 471 aa6.7□□□□□ -1.34
NIPBL-206ENST00000509429 PKNOX2Q96KN3 472 aa6.7□□□□□ -1.34
NIPBL-206ENST00000509429 SORCS2Q96PQ0 1159 aa6.7□□□□□ -1.34
NIPBL-206ENST00000509429 CORO1BQ9BR76 489 aa6.7□□□□□ -1.34
NIPBL-206ENST00000509429 KCTD3Q9Y597 815 aa6.7□□□□□ -1.34
NIPBL-206ENST00000509429 RFXAPO00287 272 aa6.69□□□□□ -1.34
NIPBL-206ENST00000509429 PLP2Q04941 152 aa6.69□□□□□ -1.34
NIPBL-206ENST00000509429 WDR18Q9BV38 432 aa6.69□□□□□ -1.34
NIPBL-206ENST00000509429 COG6Q9Y2V7 657 aa6.69□□□□□ -1.34
NIPBL-206ENST00000509429 RAC2P15153 192 aa6.68□□□□□ -1.34
NIPBL-206ENST00000509429 CLCN7P51798 805 aa6.68□□□□□ -1.34
NIPBL-206ENST00000509429 NKPD1Q17RQ9 610 aa6.68□□□□□ -1.34
NIPBL-206ENST00000509429 FEZF2Q8TBJ5 459 aa6.68□□□□□ -1.34
NIPBL-206ENST00000509429 TEPSINQ96N21 525 aa6.68□□□□□ -1.34
NIPBL-206ENST00000509429 SHROOM4Q9ULL8 1493 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 IGF2BP3O00425 579 aaKnown RBP eCLIP6.67□□□□□ -1.34
NIPBL-206ENST00000509429 TNFRSF10BO14763 440 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 IGSF3O75054 1194 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 SEMA7AO75326 666 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 ECEL1O95672 775 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 TNFRSF1AP19438 455 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 FKBP5Q13451 457 aaPredicted RBP6.67□□□□□ -1.34
NIPBL-206ENST00000509429 FAM214BQ7L5A3 538 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 NPAS4Q8IUM7 802 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 TOP6BLQ8N6T0 577 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 MCOLN1Q9GZU1 580 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 ATXN3LQ9H3M9 355 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 GTF2IRD1Q9UHL9 959 aa6.67□□□□□ -1.34
NIPBL-206ENST00000509429 CCDC9Q9Y3X0 531 aaKnown RBP6.67□□□□□ -1.34
NIPBL-206ENST00000509429 TMPRSS2O15393 492 aa6.66□□□□□ -1.34
NIPBL-206ENST00000509429 HMGA2P52926 109 aa6.66□□□□□ -1.34
NIPBL-206ENST00000509429 NEUROD2Q15784 382 aa6.66□□□□□ -1.34
NIPBL-206ENST00000509429 HDGFL1Q5TGJ6 251 aa6.66□□□□□ -1.34
NIPBL-206ENST00000509429 XKR5Q6UX68 686 aa6.66□□□□□ -1.34
NIPBL-206ENST00000509429 PCDH1Q08174 1060 aa6.65□□□□□ -1.34
NIPBL-206ENST00000509429 ZNF423Q2M1K9 1284 aa6.65□□□□□ -1.34
NIPBL-206ENST00000509429 HHIPL2Q6UWX4 724 aa6.65□□□□□ -1.34
NIPBL-206ENST00000509429 ZDHHC14Q8IZN3 488 aa6.65□□□□□ -1.34
NIPBL-206ENST00000509429 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
NIPBL-206ENST00000509429 PCOLCE2Q9UKZ9 415 aa6.65□□□□□ -1.34
NIPBL-206ENST00000509429 USP17L15C9J2P7 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L10C9JJH3 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L13C9JLJ4 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L12C9JPN9 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L11C9JVI0 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L21D6R901 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L18D6R9N7 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L22D6RA61 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L17D6RBQ6 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L19D6RCP7 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L20D6RJB6 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 FSHBP01225 129 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 USP17L24Q0WX57 530 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 PUS7Q96PZ0 661 aaKnown RBP6.64□□□□□ -1.35
NIPBL-206ENST00000509429 CHRDQ9H2X0 955 aa6.64□□□□□ -1.35
NIPBL-206ENST00000509429 FAM196BA6NMK8 535 aa6.63□□□□□ -1.35
NIPBL-206ENST00000509429 GRIN3BO60391 1043 aa6.63□□□□□ -1.35
NIPBL-206ENST00000509429 FGD1P98174 961 aa6.63□□□□□ -1.35
NIPBL-206ENST00000509429 PDE3AQ14432 1141 aa6.63□□□□□ -1.35
NIPBL-206ENST00000509429 NUDT16Q96DE0 195 aaKnown RBP6.63□□□□□ -1.35
NIPBL-206ENST00000509429 TRIM56Q9BRZ2 755 aaKnown RBP6.63□□□□□ -1.35
NIPBL-206ENST00000509429 BCCIPQ9P287 314 aaKnown RBP eCLIP6.63□□□□□ -1.35
NIPBL-206ENST00000509429 PALD1Q9ULE6 856 aa6.63□□□□□ -1.35
NIPBL-206ENST00000509429 POM121CA8CG34 1229 aa6.62□□□□□ -1.35
NIPBL-206ENST00000509429 PEX10O60683 326 aa6.62□□□□□ -1.35
NIPBL-206ENST00000509429 RPLP1P05386 114 aaKnown RBP6.62□□□□□ -1.35
NIPBL-206ENST00000509429 EDN3P14138 238 aa6.62□□□□□ -1.35
NIPBL-206ENST00000509429 CLEC4MQ9H2X3 399 aaPredicted RBP6.62□□□□□ -1.35
NIPBL-206ENST00000509429 MYOCOSA0A1B0GUC4 107 aa6.61□□□□□ -1.35
NIPBL-206ENST00000509429 ZC3H12DA2A288 527 aaKnown RBP6.61□□□□□ -1.35
NIPBL-206ENST00000509429 ZBTB39O15060 712 aa6.61□□□□□ -1.35
NIPBL-206ENST00000509429 RNGTTO60942 597 aaKnown RBP6.61□□□□□ -1.35
NIPBL-206ENST00000509429 DDX54Q8TDD1 881 aaKnown RBP6.61□□□□□ -1.35
NIPBL-206ENST00000509429 MYLIPQ8WY64 445 aa6.61□□□□□ -1.35
NIPBL-206ENST00000509429 ALPK1Q96QP1 1244 aa6.61□□□□□ -1.35
NIPBL-206ENST00000509429 BDH2Q9BUT1 245 aa6.61□□□□□ -1.35
NIPBL-206ENST00000509429 ATP13A1Q9HD20 1204 aa6.61□□□□□ -1.35
NIPBL-206ENST00000509429 DISC1Q9NRI5 854 aa6.61□□□□□ -1.35
NIPBL-206ENST00000509429 MAFBQ9Y5Q3 323 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-206ENST00000509429 CENPBP07199 599 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-206ENST00000509429 ID3Q02535 119 aa6.6□□□□□ -1.35
NIPBL-206ENST00000509429 MCM6Q14566 821 aa6.6□□□□□ -1.35
NIPBL-206ENST00000509429 TTC6Q86TZ1 520 aa6.6□□□□□ -1.35
NIPBL-206ENST00000509429 ADAM7Q9H2U9 754 aa6.6□□□□□ -1.35
NIPBL-206ENST00000509429 TFIP11Q9UBB9 837 aaKnown RBP6.6□□□□□ -1.35
NIPBL-206ENST00000509429 TEX51A0A1B0GUA7 166 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 GNAT3A8MTJ3 354 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 METTL12A8MUP2 240 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 SLFN14P0C7P3 912 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 SSPNQ14714 243 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 KANK4Q5T7N3 995 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-206ENST00000509429 TMEM132EQ6IEE7 984 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 SP8Q8IXZ3 490 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 SLITRK6Q9H5Y7 841 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 GCM1Q9NP62 436 aa6.59□□□□□ -1.35
NIPBL-206ENST00000509429 IRF2BP1Q8IU81 584 aa6.58□□□□□ -1.36
NIPBL-206ENST00000509429 STIM2Q9P246 746 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms