RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
SDHA-210ENST00000509420 TLR7Q9NYK1 1049 aaKnown RBP16.49■□□□□ 0.23
SDHA-210ENST00000509420 ABCF2Q9UG63 623 aa16.49■□□□□ 0.23
SDHA-210ENST00000509420 KCNH4Q9UQ05 1017 aa16.49■□□□□ 0.23
SDHA-210ENST00000509420 ENTPD3O75355 529 aa16.48■□□□□ 0.23
SDHA-210ENST00000509420 TNNI3KQ59H18 835 aa16.48■□□□□ 0.23
SDHA-210ENST00000509420 DCAF15Q66K64 600 aa16.48■□□□□ 0.23
SDHA-210ENST00000509420 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
SDHA-210ENST00000509420 PANK1Q8TE04 598 aa16.48■□□□□ 0.23
SDHA-210ENST00000509420 FPGT-TNNI3KV9GXZ4 949 aa16.48■□□□□ 0.23
SDHA-210ENST00000509420 PPATQ06203 517 aa16.47■□□□□ 0.23
SDHA-210ENST00000509420 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
SDHA-210ENST00000509420 ADGRA1Q86SQ6 560 aa16.47■□□□□ 0.23
SDHA-210ENST00000509420 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
SDHA-210ENST00000509420 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.47■□□□□ 0.23
SDHA-210ENST00000509420 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
SDHA-210ENST00000509420 COL2A1P02458 1487 aaPredicted RBP16.47■□□□□ 0.23
SDHA-210ENST00000509420 KIAA0100Q14667 2235 aaKnown RBP16.46■□□□□ 0.23
SDHA-210ENST00000509420 CTGFP29279 349 aa16.46■□□□□ 0.23
SDHA-210ENST00000509420 G3BP1Q13283 466 aaKnown RBP eCLIP16.46■□□□□ 0.233e-8■■■□□ 14.9
SDHA-210ENST00000509420 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
SDHA-210ENST00000509420 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
SDHA-210ENST00000509420 HOOK2Q96ED9 719 aa16.46■□□□□ 0.23
SDHA-210ENST00000509420 ARHGAP39Q9C0H5 1083 aa16.46■□□□□ 0.23
SDHA-210ENST00000509420 PTPN22Q9Y2R2 807 aa16.46■□□□□ 0.23
SDHA-210ENST00000509420 TRIM17Q9Y577 477 aa16.46■□□□□ 0.23
SDHA-210ENST00000509420 ATAD5Q96QE3 1844 aa16.45■□□□□ 0.22
SDHA-210ENST00000509420 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
SDHA-210ENST00000509420 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
SDHA-210ENST00000509420 CETPP11597 493 aa16.45■□□□□ 0.22
SDHA-210ENST00000509420 SP3Q02447 781 aa16.45■□□□□ 0.22
SDHA-210ENST00000509420 SNAPC2Q13487 334 aa16.45■□□□□ 0.22
SDHA-210ENST00000509420 RRP1BQ14684 758 aaKnown RBP16.45■□□□□ 0.22
SDHA-210ENST00000509420 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
SDHA-210ENST00000509420 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
SDHA-210ENST00000509420 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
SDHA-210ENST00000509420 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
SDHA-210ENST00000509420 EAF2Q96CJ1 260 aaPredicted RBP16.45■□□□□ 0.22
SDHA-210ENST00000509420 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
SDHA-210ENST00000509420 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
SDHA-210ENST00000509420 TLR2O60603 784 aa16.44■□□□□ 0.22
SDHA-210ENST00000509420 SURF6O75683 361 aaKnown RBP16.44■□□□□ 0.22
SDHA-210ENST00000509420 SPTY2D1Q68D10 685 aaPredicted RBP16.44■□□□□ 0.22
SDHA-210ENST00000509420 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
SDHA-210ENST00000509420 FTSJ3Q8IY81 847 aaKnown RBP16.44■□□□□ 0.22
SDHA-210ENST00000509420 ERO1AQ96HE7 468 aa16.44■□□□□ 0.22
SDHA-210ENST00000509420 ZNF512BQ96KM6 892 aaPredicted RBP16.44■□□□□ 0.22
SDHA-210ENST00000509420 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
SDHA-210ENST00000509420 LOC285556D6RIA3 1793 aa16.43■□□□□ 0.22
SDHA-210ENST00000509420 FAM196BA6NMK8 535 aa16.43■□□□□ 0.22
SDHA-210ENST00000509420 PICALMQ13492 652 aa16.43■□□□□ 0.22
SDHA-210ENST00000509420 C17orf99Q6UX52 265 aa16.43■□□□□ 0.22
SDHA-210ENST00000509420 ARMC5Q96C12 935 aa16.43■□□□□ 0.22
SDHA-210ENST00000509420 DDX60LQ5H9U9 1706 aaKnown RBP16.42■□□□□ 0.22
SDHA-210ENST00000509420 UQCRFS1P1P0C7P4 283 aa16.42■□□□□ 0.22
SDHA-210ENST00000509420 PTPRAP18433 802 aa16.42■□□□□ 0.22
SDHA-210ENST00000509420 ANKRD23Q86SG2 305 aa16.42■□□□□ 0.22
SDHA-210ENST00000509420 CCDC84Q86UT8 332 aaPredicted RBP16.42■□□□□ 0.22
SDHA-210ENST00000509420 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
SDHA-210ENST00000509420 SH3RF3Q8TEJ3 882 aaPredicted RBP16.42■□□□□ 0.22
SDHA-210ENST00000509420 ZFYVE28Q9HCC9 887 aa16.42■□□□□ 0.22
SDHA-210ENST00000509420 AFG3L2Q9Y4W6 797 aa16.42■□□□□ 0.22
SDHA-210ENST00000509420 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
SDHA-210ENST00000509420 ZAP70P43403 619 aa16.41■□□□□ 0.22
SDHA-210ENST00000509420 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
SDHA-210ENST00000509420 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
SDHA-210ENST00000509420 OSBPL5Q9H0X9 879 aaPredicted RBP16.41■□□□□ 0.22
SDHA-210ENST00000509420 DNAJC18Q9H819 358 aa16.41■□□□□ 0.22
SDHA-210ENST00000509420 EFCC1Q9HA90 598 aa16.41■□□□□ 0.22
SDHA-210ENST00000509420 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
SDHA-210ENST00000509420 NDUFB9Q9Y6M9 179 aa16.41■□□□□ 0.22
SDHA-210ENST00000509420 MGAMO43451 1857 aa16.4■□□□□ 0.22
SDHA-210ENST00000509420 A0A0G2JLL6 359 aaPredicted RBP16.4■□□□□ 0.22
SDHA-210ENST00000509420 PDHXO00330 501 aa16.4■□□□□ 0.22
SDHA-210ENST00000509420 TBC1D12O60347 775 aa16.4■□□□□ 0.22
SDHA-210ENST00000509420 JAG1P78504 1218 aa16.4■□□□□ 0.22
SDHA-210ENST00000509420 LACTBP83111 547 aaPredicted RBP16.4■□□□□ 0.22
SDHA-210ENST00000509420 GORABQ5T7V8 394 aa16.4■□□□□ 0.22
SDHA-210ENST00000509420 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
SDHA-210ENST00000509420 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
SDHA-210ENST00000509420 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
SDHA-210ENST00000509420 CXCL11O14625 94 aa16.39■□□□□ 0.21
SDHA-210ENST00000509420 MAP4K4O95819 1239 aaPredicted RBP16.39■□□□□ 0.21
SDHA-210ENST00000509420 BCRP11274 1271 aa16.39■□□□□ 0.21
SDHA-210ENST00000509420 PPP4CP60510 307 aa16.39■□□□□ 0.21
SDHA-210ENST00000509420 ZBTB40Q9NUA8 1239 aa16.39■□□□□ 0.21
SDHA-210ENST00000509420 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
SDHA-210ENST00000509420 CTNND1O60716 968 aaKnown RBP16.38■□□□□ 0.21
SDHA-210ENST00000509420 GSTO1P78417 241 aa16.38■□□□□ 0.21
SDHA-210ENST00000509420 SHROOM1Q2M3G4 852 aaPredicted RBP16.38■□□□□ 0.21
SDHA-210ENST00000509420 TTC39AQ5SRH9 613 aa16.38■□□□□ 0.21
SDHA-210ENST00000509420 C20orf194Q5TEA3 1177 aa16.38■□□□□ 0.21
SDHA-210ENST00000509420 METTL16Q86W50 562 aaKnown RBP16.38■□□□□ 0.21
SDHA-210ENST00000509420 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
SDHA-210ENST00000509420 TRIM47Q96LD4 638 aa16.38■□□□□ 0.21
SDHA-210ENST00000509420 ANTXR1Q9H6X2 564 aa16.38■□□□□ 0.21
SDHA-210ENST00000509420 CPA4Q9UI42 421 aa16.38■□□□□ 0.21
SDHA-210ENST00000509420 LDHCP07864 332 aa16.37■□□□□ 0.21
SDHA-210ENST00000509420 CYP2C8P10632 490 aa16.37■□□□□ 0.21
SDHA-210ENST00000509420 OS9Q13438 667 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms