RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 OTOFQ9HC10 1997 aa24.4■■□□□ 1.5
HOXC6-204ENST00000509328 DYNLL1P63167 89 aaKnown RBP24.4■■□□□ 1.5
HOXC6-204ENST00000509328 UBE3CQ15386 1083 aa24.4■■□□□ 1.5
HOXC6-204ENST00000509328 CAPNS2Q96L46 248 aa24.4■■□□□ 1.5
HOXC6-204ENST00000509328 FZD1Q9UP38 647 aa24.4■■□□□ 1.5
HOXC6-204ENST00000509328 MYH1P12882 1939 aa24.39■■□□□ 1.5
HOXC6-204ENST00000509328 COL2A1P02458 1487 aaPredicted RBP24.39■■□□□ 1.5
HOXC6-204ENST00000509328 MAGEB6P1A0A0J9YX57 407 aa24.39■■□□□ 1.49
HOXC6-204ENST00000509328 USP2O75604 605 aaPredicted RBP24.39■■□□□ 1.49
HOXC6-204ENST00000509328 IREB2P48200 963 aaKnown RBP24.39■■□□□ 1.49
HOXC6-204ENST00000509328 CYP4F22Q6NT55 531 aa24.39■■□□□ 1.49
HOXC6-204ENST00000509328 PLEKHM2Q8IWE5 1019 aa24.39■■□□□ 1.49
HOXC6-204ENST00000509328 ZSCAN29Q8IWY8 852 aaPredicted RBP24.39■■□□□ 1.49
HOXC6-204ENST00000509328 WDR33Q9C0J8 1336 aaKnown RBP24.38■■□□□ 1.49
HOXC6-204ENST00000509328 UNCXA6NJT0 531 aa24.38■■□□□ 1.49
HOXC6-204ENST00000509328 ZNF157P51786 506 aaPredicted RBP24.38■■□□□ 1.49
HOXC6-204ENST00000509328 LDLRAD1Q5T700 205 aa24.38■■□□□ 1.49
HOXC6-204ENST00000509328 DCAF15Q66K64 600 aa24.38■■□□□ 1.49
HOXC6-204ENST00000509328 TGFBRAP1Q8WUH2 860 aa24.38■■□□□ 1.49
HOXC6-204ENST00000509328 RIOK1Q9BRS2 568 aaKnown RBP24.38■■□□□ 1.49
HOXC6-204ENST00000509328 OSBPL5Q9H0X9 879 aaPredicted RBP24.38■■□□□ 1.49
HOXC6-204ENST00000509328 OSBPL3Q9H4L5 887 aa24.38■■□□□ 1.49
HOXC6-204ENST00000509328 LRRFIP1Q32MZ4 808 aaKnown RBP24.37■■□□□ 1.49
HOXC6-204ENST00000509328 SH3BP5LQ7L8J4 393 aa24.37■■□□□ 1.49
HOXC6-204ENST00000509328 CCDC102AQ96A19 550 aa24.37■■□□□ 1.49
HOXC6-204ENST00000509328 CSRNP1Q96S65 589 aa24.37■■□□□ 1.49
HOXC6-204ENST00000509328 ATRNL1Q5VV63 1379 aa24.37■■□□□ 1.49
HOXC6-204ENST00000509328 THSD7BQ9C0I4 1608 aa24.36■■□□□ 1.49
HOXC6-204ENST00000509328 DDTLA6NHG4 134 aaPredicted RBP24.36■■□□□ 1.49
HOXC6-204ENST00000509328 ZFYP08048 801 aaPredicted RBP24.36■■□□□ 1.49
HOXC6-204ENST00000509328 GRM1Q13255 1194 aa24.36■■□□□ 1.49
HOXC6-204ENST00000509328 SLFNL1Q499Z3 407 aa24.36■■□□□ 1.49
HOXC6-204ENST00000509328 FLT1P17948 1338 aa24.35■■□□□ 1.49
HOXC6-204ENST00000509328 NAV1Q8NEY1 1877 aa24.35■■□□□ 1.49
HOXC6-204ENST00000509328 RNF113AO15541 343 aaKnown RBP24.35■■□□□ 1.49
HOXC6-204ENST00000509328 MAPKAPK5Q8IW41 473 aa24.35■■□□□ 1.49
HOXC6-204ENST00000509328 JMYQ8N9B5 988 aa24.35■■□□□ 1.49
HOXC6-204ENST00000509328 EVI5LQ96CN4 794 aa24.35■■□□□ 1.49
HOXC6-204ENST00000509328 FSD1Q9BTV5 496 aa24.35■■□□□ 1.49
HOXC6-204ENST00000509328 ZNF341Q9BYN7 854 aa24.35■■□□□ 1.49
HOXC6-204ENST00000509328 CHGBP05060 677 aa24.34■■□□□ 1.49
HOXC6-204ENST00000509328 USP5P45974 858 aa24.34■■□□□ 1.49
HOXC6-204ENST00000509328 CENPQQ7L2Z9 268 aaPredicted RBP24.34■■□□□ 1.49
HOXC6-204ENST00000509328 MIGA2Q7L4E1 593 aa24.34■■□□□ 1.49
HOXC6-204ENST00000509328 ANKRD13AQ8IZ07 590 aa24.34■■□□□ 1.49
HOXC6-204ENST00000509328 CRNKL1Q9BZJ0 848 aaKnown RBP24.34■■□□□ 1.49
HOXC6-204ENST00000509328 FAM155AB1AL88 458 aaPredicted RBP24.33■■□□□ 1.49
HOXC6-204ENST00000509328 SLC10A3P09131 477 aa24.33■■□□□ 1.49
HOXC6-204ENST00000509328 PDE4AP27815 886 aa24.33■■□□□ 1.49
HOXC6-204ENST00000509328 RASAL3Q86YV0 1011 aa24.33■■□□□ 1.49
HOXC6-204ENST00000509328 LCORLQ8N3X6 602 aa24.33■■□□□ 1.49
HOXC6-204ENST00000509328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.33■■□□□ 1.49
HOXC6-204ENST00000509328 DHX36Q9H2U1 1008 aaKnown RBP24.33■■□□□ 1.49
HOXC6-204ENST00000509328 SIPA1L1O43166 1804 aa24.33■■□□□ 1.48
HOXC6-204ENST00000509328 MBD4O95243 580 aa24.32■■□□□ 1.48
HOXC6-204ENST00000509328 MAP3K9P80192 1104 aa24.32■■□□□ 1.48
HOXC6-204ENST00000509328 NOGQ13253 232 aa24.32■■□□□ 1.48
HOXC6-204ENST00000509328 APPBP2Q92624 585 aa24.32■■□□□ 1.48
HOXC6-204ENST00000509328 SLC10A4Q96EP9 437 aa24.32■■□□□ 1.48
HOXC6-204ENST00000509328 ARMT1Q9H993 441 aa24.32■■□□□ 1.48
HOXC6-204ENST00000509328 DDX60LQ5H9U9 1706 aaKnown RBP24.32■■□□□ 1.48
HOXC6-204ENST00000509328 MAP2K2P36507 400 aa24.31■■□□□ 1.48
HOXC6-204ENST00000509328 MAP3K10Q02779 954 aa24.31■■□□□ 1.48
HOXC6-204ENST00000509328 AIDAQ96BJ3 306 aa24.31■■□□□ 1.48
HOXC6-204ENST00000509328 CLMNQ96JQ2 1002 aa24.31■■□□□ 1.48
HOXC6-204ENST00000509328 WRNIP1Q96S55 665 aa24.31■■□□□ 1.48
HOXC6-204ENST00000509328 PUS7LQ9H0K6 701 aaKnown RBP24.31■■□□□ 1.48
HOXC6-204ENST00000509328 TBC1D12O60347 775 aa24.3■■□□□ 1.48
HOXC6-204ENST00000509328 AOC2O75106 756 aa24.3■■□□□ 1.48
HOXC6-204ENST00000509328 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.3■■□□□ 1.48
HOXC6-204ENST00000509328 TICAM2Q86XR7 235 aa24.3■■□□□ 1.48
HOXC6-204ENST00000509328 CCDC136Q96JN2 1154 aa24.3■■□□□ 1.48
HOXC6-204ENST00000509328 PI4KBQ9UBF8 816 aa24.3■■□□□ 1.48
HOXC6-204ENST00000509328 ZNF112Q9UJU3 913 aa24.3■■□□□ 1.48
HOXC6-204ENST00000509328 CSADQ9Y600 493 aa24.3■■□□□ 1.48
HOXC6-204ENST00000509328 BAZ2AQ9UIF9 1905 aaKnown RBP24.29■■□□□ 1.48
HOXC6-204ENST00000509328 TRIM6-TRIM34B2RNG4 842 aa24.29■■□□□ 1.48
HOXC6-204ENST00000509328 OSBP2Q969R2 916 aa24.29■■□□□ 1.48
HOXC6-204ENST00000509328 SAP30BPQ9UHR5 308 aaKnown RBP24.29■■□□□ 1.48
HOXC6-204ENST00000509328 PALD1Q9ULE6 856 aa24.29■■□□□ 1.48
HOXC6-204ENST00000509328 LAMB1P07942 1786 aa24.29■■□□□ 1.48
HOXC6-204ENST00000509328 VGLL4Q14135 290 aa24.28■■□□□ 1.48
HOXC6-204ENST00000509328 ERICH6BQ5W0A0 696 aa24.28■■□□□ 1.48
HOXC6-204ENST00000509328 HLA-DOAP06340 250 aa24.27■■□□□ 1.48
HOXC6-204ENST00000509328 SDR42E1Q8WUS8 393 aa24.27■■□□□ 1.48
HOXC6-204ENST00000509328 ZKSCAN4Q969J2 545 aaPredicted RBP24.27■■□□□ 1.48
HOXC6-204ENST00000509328 RILPL2Q969X0 211 aa24.27■■□□□ 1.48
HOXC6-204ENST00000509328 ELP3Q9H9T3 547 aa24.27■■□□□ 1.48
HOXC6-204ENST00000509328 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.27■■□□□ 1.48
HOXC6-204ENST00000509328 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.27■■□□□ 1.48
HOXC6-204ENST00000509328 HERC5Q9UII4 1024 aaKnown RBP24.27■■□□□ 1.48
HOXC6-204ENST00000509328 DOCK1Q14185 1865 aa24.27■■□□□ 1.48
HOXC6-204ENST00000509328 ATAD5Q96QE3 1844 aa24.26■■□□□ 1.47
HOXC6-204ENST00000509328 PHF20L1A8MW92 1017 aa24.26■■□□□ 1.47
HOXC6-204ENST00000509328 ZMYM1Q5SVZ6 1142 aa24.26■■□□□ 1.47
HOXC6-204ENST00000509328 SPRYD7Q5W111 196 aa24.26■■□□□ 1.47
HOXC6-204ENST00000509328 FOXP4Q8IVH2 680 aaPredicted RBP24.26■■□□□ 1.47
HOXC6-204ENST00000509328 STRBPQ96SI9 672 aaKnown RBP24.26■■□□□ 1.47
HOXC6-204ENST00000509328 DCP1AQ9NPI6 582 aaPredicted RBP24.26■■□□□ 1.47
HOXC6-204ENST00000509328 ATP8A2Q9NTI2 1148 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms