RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 SCN4AP35499 1836 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 FOCADQ5VW36 1801 aa17.07■□□□□ 0.32
SPOCK1-206ENST00000509293 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 EGFRP00533 1210 aa17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 IMMTQ16891 758 aaKnown RBP17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 TBC1D10BQ4KMP7 808 aaPredicted RBP17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 CREB3L3Q68CJ9 461 aa17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 CTR9Q6PD62 1173 aa17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 OSBPL5Q9H0X9 879 aaPredicted RBP17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 DDX4Q9NQI0 724 aaKnown RBP17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 ANAPC4Q9UJX5 808 aa17.06■□□□□ 0.32
SPOCK1-206ENST00000509293 PITPNM2Q9BZ72 1349 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 SLC27A2O14975 620 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 ZKSCAN1P17029 563 aaPredicted RBP17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 NFIAQ12857 509 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 TNFAIP1Q13829 316 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 MAPKAPK5Q8IW41 473 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 ZC3H15Q8WU90 426 aaKnown RBP17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 FAM198AQ9UFP1 575 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 CDK5RAP2Q96SN8 1893 aa17.05■□□□□ 0.32
SPOCK1-206ENST00000509293 ATRNL1Q5VV63 1379 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 POTECB2RU33 542 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 USP17L12C9JPN9 530 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 USP17L21D6R901 530 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 ZNF213O14771 459 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 CYP21A2P08686 494 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 EPHX2P34913 555 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 TNNI2P48788 182 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 NT5C2P49902 561 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 HIRAP54198 1017 aaPredicted RBP17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 KRT32Q14532 448 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 PNMA8AQ86V59 439 aaPredicted RBP17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 FAM151AQ8WW52 585 aa17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 DDX60LQ5H9U9 1706 aaKnown RBP17.04■□□□□ 0.32
SPOCK1-206ENST00000509293 PCP11498 1178 aaKnown RBP17.03■□□□□ 0.32
SPOCK1-206ENST00000509293 PPARAQ07869 468 aa17.03■□□□□ 0.32
SPOCK1-206ENST00000509293 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
SPOCK1-206ENST00000509293 PGAP2Q9UHJ9 254 aa17.03■□□□□ 0.32
SPOCK1-206ENST00000509293 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
SPOCK1-206ENST00000509293 CLRN2A0PK11 232 aa17.02■□□□□ 0.32
SPOCK1-206ENST00000509293 VEGFAP15692 232 aaPredicted RBP17.02■□□□□ 0.32
SPOCK1-206ENST00000509293 CACNB3P54284 484 aa17.02■□□□□ 0.32
SPOCK1-206ENST00000509293 PICALMQ13492 652 aa17.02■□□□□ 0.32
SPOCK1-206ENST00000509293 EHD4Q9H223 541 aa17.02■□□□□ 0.32
SPOCK1-206ENST00000509293 PPP2R3BQ9Y5P8 575 aa17.02■□□□□ 0.32
SPOCK1-206ENST00000509293 CNTNAP1P78357 1384 aa17.02■□□□□ 0.31
SPOCK1-206ENST00000509293 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 HLA-DOAP06340 250 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 SLC3A2P08195 630 aaKnown RBP17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 FGRP09769 529 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 METTL16Q86W50 562 aaKnown RBP17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 RASEFQ8IZ41 740 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 TM6SF1Q9BZW5 370 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 RNF41Q9H4P4 317 aaPredicted RBP17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 VEZTQ9HBM0 779 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 SNX14Q9Y5W7 946 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 BAZ2AQ9UIF9 1905 aaKnown RBP17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 UTRNP46939 3433 aa17.01■□□□□ 0.31
SPOCK1-206ENST00000509293 LAMA4Q16363 1823 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 TCP10L2B9ZVM9 353 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 ANGEL2Q5VTE6 544 aaKnown RBP17■□□□□ 0.31
SPOCK1-206ENST00000509293 NBPF3Q9H094 633 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 ZNF287Q9HBT7 754 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 GGA3Q9NZ52 723 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 PI4KBQ9UBF8 816 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 PALD1Q9ULE6 856 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 MYH1P12882 1939 aa17■□□□□ 0.31
SPOCK1-206ENST00000509293 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 PSMA5P28066 241 aa16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 GABPAQ06546 454 aa16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 TCP10Q12799 353 aa16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 SH3BP5LQ7L8J4 393 aa16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 FOXP4Q8IVH2 680 aaPredicted RBP16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 ZFPM1Q8IX07 1006 aa16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 CNNM2Q9H8M5 875 aa16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 SAP30BPQ9UHR5 308 aaKnown RBP16.99■□□□□ 0.31
SPOCK1-206ENST00000509293 ASTN2O75129 1339 aaPredicted RBP16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 LAMB1P07942 1786 aa16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 DDTLA6NHG4 134 aaPredicted RBP16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 E7EWF7 191 aa16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 ORC4O43929 436 aa16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 CYP2D6P10635 497 aa16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 PLCD1P51178 756 aa16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 HAND2P61296 217 aa16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 PDE4BQ07343 736 aa16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 RASA3Q14644 834 aa16.98■□□□□ 0.31
SPOCK1-206ENST00000509293 MFSD6Q6ZSS7 791 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms