RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CCDC13Q8IYE1 715 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 RHPN1Q8TCX5 695 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 SSH3Q8TE77 659 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 TCEANC2Q96MN5 208 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 NAPGQ99747 312 aaPredicted RBP11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 CENPHQ9H3R5 247 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 HOMER3Q9NSC5 361 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 CACNA1FO60840 1977 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 ZEB2O60315 1214 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 AP1G2O75843 785 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 SLC8A1P32418 973 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 IL13P35225 146 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 PDCD2Q16342 344 aaPredicted RBP11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 PAIP2Q9BPZ3 127 aaKnown RBP11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 ADGRG1Q9Y653 693 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 ATP7BP35670 1465 aa11.37□□□□□ -0.59
PDGFRA-207ENST00000509092 TARSL2A2RTX5 802 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 GOLGA6BA6NDN3 693 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 CAND2O75155 1236 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 PECAM1P16284 738 aaPredicted RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 GBP2P32456 591 aaPredicted RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 PRPHP41219 470 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 ADKP55263 362 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 AKAP17AQ02040 695 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 SLC5A9Q2M3M2 681 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 SPECC1LQ69YQ0 1117 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 SMARCC2Q8TAQ2 1214 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 PARD3BQ8TEW8 1205 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 GGA2Q9UJY4 613 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 PTPRMP28827 1452 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 SKAP2O75563 359 aaPredicted RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 PDHBP11177 359 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 IBSPP21815 317 aaPredicted RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 RBM5P52756 815 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 SLC35F6Q8N357 371 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 SAAL1Q96ER3 474 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 THOC1Q96FV9 657 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 RSRC1Q96IZ7 334 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 LLPHQ9BRT6 129 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-207ENST00000509092 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 GOLGA6L7A0A1B0GV03 622 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 ARID4AP29374 1257 aaPredicted RBP11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 MTF1Q14872 753 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 PTPN21Q16825 1174 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 TTLL7Q6ZT98 887 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 FAM228AQ86W67 206 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 SPDL1Q96EA4 605 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 NAA15Q9BXJ9 866 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 ACTR5Q9H9F9 607 aaPredicted RBP11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 RTEL1Q9NZ71 1219 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 RPS6KL1Q9Y6S9 549 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 A2ML1A8K2U0 1454 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 OS9Q13438 667 aaPredicted RBP11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 CYB5D1Q6P9G0 228 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 BRAPQ7Z569 592 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 HOOK2Q96ED9 719 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 SELENOOQ9BVL4 669 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 TUBE1Q9UJT0 475 aa11.35□□□□□ -0.59
PDGFRA-207ENST00000509092 UBR1Q8IWV7 1749 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 KDM6AO15550 1401 aaPredicted RBP11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 SOWAHDA6NJG2 315 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 SURF6O75683 361 aaKnown RBP11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 RNF187Q5TA31 235 aaPredicted RBP11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 LMBR1Q8WVP7 490 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 TCP11Q8WWU5 503 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 SNRKQ9NRH2 765 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 HMG20BQ9P0W2 317 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 MYO1AQ9UBC5 1043 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 NEFHP12036 1026 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 RAB27AP51159 221 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 AMPD2Q01433 879 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 IFFO1Q0D2I5 559 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 POLA2Q14181 598 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 RASGRP2Q7LDG7 609 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 HDGFL2Q7Z4V5 671 aaPredicted RBP11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 KIRREL3Q8IZU9 778 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 OR8K1Q8NGG5 319 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 ZBTB10Q96DT7 871 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 SIL1Q9H173 461 aa11.34□□□□□ -0.59
PDGFRA-207ENST00000509092 HIP1O00291 1037 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 PES1O00541 588 aaKnown RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 OPA1O60313 960 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 COQ9O75208 318 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 EPB41P11171 864 aaKnown RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 NUTM2DQ5VT03 806 aaPredicted RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 NAA35Q5VZE5 725 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 RAD9BQ6WBX8 426 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 FUKQ8N0W3 1084 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 KCNG4Q8TDN1 519 aa11.33□□□□□ -0.6
PDGFRA-207ENST00000509092 SCLT1Q96NL6 688 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms