RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
TOPBP1-206ENST00000508524 ATG3Q9NT62 314 aa9.59□□□□□ -0.87
TOPBP1-206ENST00000508524 PIM2Q9P1W9 311 aa9.59□□□□□ -0.87
TOPBP1-206ENST00000508524 NEFMP07197 916 aa9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 HCLS1P14317 486 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 SPINK2P20155 84 aa9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 HOXA10P31260 410 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 GRIK1P39086 918 aa9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 ERVK-24P63145 666 aa9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 TAGLNQ01995 201 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 LRRC14Q15048 493 aa9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 OSBPL1AQ9BXW6 950 aa9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 LGR6Q9HBX8 967 aa9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 CYP8B1Q9UNU6 501 aa9.58□□□□□ -0.88
TOPBP1-206ENST00000508524 ERCC3P19447 782 aa9.57□□□□□ -0.88
TOPBP1-206ENST00000508524 MEI1Q5TIA1 1274 aa9.57□□□□□ -0.88
TOPBP1-206ENST00000508524 TMC4Q7Z404 712 aa9.57□□□□□ -0.88
TOPBP1-206ENST00000508524 SMYD4Q8IYR2 804 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-206ENST00000508524 FAM161BQ96MY7 647 aa9.57□□□□□ -0.88
TOPBP1-206ENST00000508524 METTL22Q9BUU2 404 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-206ENST00000508524 PSMD2Q13200 908 aa9.56□□□□□ -0.88
TOPBP1-206ENST00000508524 SCARA3Q6AZY7 606 aa9.56□□□□□ -0.88
TOPBP1-206ENST00000508524 GAL3ST3Q96A11 431 aa9.56□□□□□ -0.88
TOPBP1-206ENST00000508524 LEMD3Q9Y2U8 911 aa9.56□□□□□ -0.88
TOPBP1-206ENST00000508524 CTSHP09668 335 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 FOSL1P15407 271 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 NTF4P34130 210 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 CCDC85BQ15834 202 aaPredicted RBP9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 TTBK2Q6IQ55 1244 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 ZNF765Q7L2R6 523 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 NBPF11Q86T75 865 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 DTX1Q86Y01 620 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 RNF214Q8ND24 703 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 ISL2Q96A47 359 aa9.55□□□□□ -0.88
TOPBP1-206ENST00000508524 RNGTTO60942 597 aaKnown RBP9.54□□□□□ -0.88
TOPBP1-206ENST00000508524 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-206ENST00000508524 PTPN11Q06124 597 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-206ENST00000508524 RING1Q06587 406 aa9.54□□□□□ -0.88
TOPBP1-206ENST00000508524 CDK5R2Q13319 367 aa9.54□□□□□ -0.88
TOPBP1-206ENST00000508524 MSMPQ1L6U9 139 aa9.54□□□□□ -0.88
TOPBP1-206ENST00000508524 PPM1JQ5JR12 505 aa9.54□□□□□ -0.88
TOPBP1-206ENST00000508524 CSADQ9Y600 493 aa9.54□□□□□ -0.88
TOPBP1-206ENST00000508524 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
TOPBP1-206ENST00000508524 ADAMTS4O75173 837 aa9.53□□□□□ -0.88
TOPBP1-206ENST00000508524 PCDHA4Q9UN74 947 aa9.53□□□□□ -0.88
TOPBP1-206ENST00000508524 CYP27A1Q02318 531 aa9.52□□□□□ -0.89
TOPBP1-206ENST00000508524 OGFOD3Q6PK18 319 aa9.52□□□□□ -0.89
TOPBP1-206ENST00000508524 PCOLCE2Q9UKZ9 415 aa9.52□□□□□ -0.89
TOPBP1-206ENST00000508524 CYP26A1O43174 497 aa9.51□□□□□ -0.89
TOPBP1-206ENST00000508524 RPS26P62854 115 aaKnown RBP9.51□□□□□ -0.89
TOPBP1-206ENST00000508524 DUSP27Q5VZP5 1158 aa9.51□□□□□ -0.89
TOPBP1-206ENST00000508524 C12orf40Q86WS4 652 aa9.51□□□□□ -0.89
TOPBP1-206ENST00000508524 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
TOPBP1-206ENST00000508524 LIG3P49916 1009 aa9.5□□□□□ -0.89
TOPBP1-206ENST00000508524 ST13P50502 369 aaKnown RBP9.5□□□□□ -0.89
TOPBP1-206ENST00000508524 INPP5AQ14642 412 aa9.5□□□□□ -0.89
TOPBP1-206ENST00000508524 TAF1CQ15572 869 aaPredicted RBP9.5□□□□□ -0.89
TOPBP1-206ENST00000508524 LRFN4Q6PJG9 635 aa9.5□□□□□ -0.89
TOPBP1-206ENST00000508524 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.5□□□□□ -0.89
TOPBP1-206ENST00000508524 UBE3DQ7Z6J8 389 aa9.5□□□□□ -0.89
TOPBP1-206ENST00000508524 USP31Q70CQ4 1352 aa9.5□□□□□ -0.89
TOPBP1-206ENST00000508524 SORBS3O60504 671 aa9.49□□□□□ -0.89
TOPBP1-206ENST00000508524 FAM87AP0C7U9 286 aa9.49□□□□□ -0.89
TOPBP1-206ENST00000508524 MAP3K11Q16584 847 aa9.49□□□□□ -0.89
TOPBP1-206ENST00000508524 ZBTB37Q5TC79 503 aa9.49□□□□□ -0.89
TOPBP1-206ENST00000508524 AGMOQ6ZNB7 445 aa9.49□□□□□ -0.89
TOPBP1-206ENST00000508524 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.49□□□□□ -0.89
TOPBP1-206ENST00000508524 CRELD1Q96HD1 420 aa9.49□□□□□ -0.89
TOPBP1-206ENST00000508524 PCDHB5Q9Y5E4 795 aa9.49□□□□□ -0.89
TOPBP1-206ENST00000508524 FANCGO15287 622 aa9.48□□□□□ -0.89
TOPBP1-206ENST00000508524 PLPPR2Q96GM1 343 aa9.48□□□□□ -0.89
TOPBP1-206ENST00000508524 NOC4LQ9BVI4 516 aaKnown RBP9.48□□□□□ -0.89
TOPBP1-206ENST00000508524 LEFTY1O75610 366 aa9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 CDK8P49336 464 aa9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 SEPT6Q14141 434 aa9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 CYFIP1Q7L576 1253 aa9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 ELMO3Q96BJ8 720 aa9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 DUSP23Q9BVJ7 150 aa9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 LRRC4CQ9HCJ2 640 aa9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 SSU72Q9NP77 194 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 ZC3H7BQ9UGR2 993 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-206ENST00000508524 PRNPP04156 253 aa9.46□□□□□ -0.9
TOPBP1-206ENST00000508524 TFE3P19532 575 aaPredicted RBP9.46□□□□□ -0.9
TOPBP1-206ENST00000508524 CYP27C1Q4G0S4 372 aa9.46□□□□□ -0.9
TOPBP1-206ENST00000508524 HOMEZQ8IX15 550 aa9.46□□□□□ -0.9
TOPBP1-206ENST00000508524 BCL2L13Q9BXK5 485 aa9.46□□□□□ -0.9
TOPBP1-206ENST00000508524 MRS2Q9HD23 443 aa9.46□□□□□ -0.9
TOPBP1-206ENST00000508524 PICK1Q9NRD5 415 aa9.46□□□□□ -0.9
TOPBP1-206ENST00000508524 VTI1BQ9UEU0 232 aa9.46□□□□□ -0.9
TOPBP1-206ENST00000508524 ZBTB7CA1YPR0 619 aa9.45□□□□□ -0.9
TOPBP1-206ENST00000508524 WIPI1Q5MNZ9 446 aaPredicted RBP9.45□□□□□ -0.9
TOPBP1-206ENST00000508524 NFXL1Q6ZNB6 911 aa9.45□□□□□ -0.9
TOPBP1-206ENST00000508524 HDXQ7Z353 690 aa9.45□□□□□ -0.9
TOPBP1-206ENST00000508524 TLR6Q9Y2C9 796 aa9.45□□□□□ -0.9
TOPBP1-206ENST00000508524 PRAMEF27A3QJZ7 478 aa9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 WNT11O96014 354 aa9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 GP2P55259 537 aaKnown RBP9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 TMCO4Q5TGY1 634 aa9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 TOP6BLQ8N6T0 577 aa9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 PHC3Q8NDX5 983 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms