RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 LRP2BPQ9P2M1 347 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 ZNF112Q9UJU3 913 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 ARAP2Q8WZ64 1704 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 FMNL1O95466 1100 aaPredicted RBP20.15■□□□□ 0.82
DDR1-263ENST00000508317 TRIM27P14373 513 aa20.15■□□□□ 0.82
DDR1-263ENST00000508317 BTDP43251 543 aa20.15■□□□□ 0.82
DDR1-263ENST00000508317 LACTBP83111 547 aaPredicted RBP20.15■□□□□ 0.82
DDR1-263ENST00000508317 CCDC158Q5M9N0 1113 aa20.15■□□□□ 0.82
DDR1-263ENST00000508317 SCYL3Q8IZE3 742 aa20.14■□□□□ 0.81
DDR1-263ENST00000508317 SPATA5Q8NB90 893 aa20.14■□□□□ 0.81
DDR1-263ENST00000508317 FAM163AQ96GL9 167 aaPredicted RBP20.14■□□□□ 0.81
DDR1-263ENST00000508317 FAM198AQ9UFP1 575 aa20.14■□□□□ 0.81
DDR1-263ENST00000508317 ZHX2Q9Y6X8 837 aa20.14■□□□□ 0.81
DDR1-263ENST00000508317 MROH7-TTC4A0A0A0MT08 1334 aa20.13■□□□□ 0.81
DDR1-263ENST00000508317 GAKO14976 1311 aa20.13■□□□□ 0.81
DDR1-263ENST00000508317 BAG3O95817 575 aa20.13■□□□□ 0.81
DDR1-263ENST00000508317 RAET1EQ8TD07 263 aa20.13■□□□□ 0.81
DDR1-263ENST00000508317 TRIM34Q9BYJ4 488 aa20.13■□□□□ 0.81
DDR1-263ENST00000508317 BIN2Q9UBW5 565 aaPredicted RBP20.13■□□□□ 0.81
DDR1-263ENST00000508317 KCNH4Q9UQ05 1017 aa20.13■□□□□ 0.81
DDR1-263ENST00000508317 PTCH2Q9Y6C5 1203 aa20.13■□□□□ 0.81
DDR1-263ENST00000508317 CTNND1O60716 968 aaKnown RBP20.12■□□□□ 0.81
DDR1-263ENST00000508317 MECOMQ03112 1051 aa20.12■□□□□ 0.81
DDR1-263ENST00000508317 TTC39AQ5SRH9 613 aa20.12■□□□□ 0.81
DDR1-263ENST00000508317 GADL1Q6ZQY3 521 aa20.12■□□□□ 0.81
DDR1-263ENST00000508317 CPA4Q9UI42 421 aa20.12■□□□□ 0.81
DDR1-263ENST00000508317 BCAR3O75815 825 aa20.11■□□□□ 0.81
DDR1-263ENST00000508317 PLCG2P16885 1265 aa20.11■□□□□ 0.81
DDR1-263ENST00000508317 PSMC4P43686 418 aa20.11■□□□□ 0.81
DDR1-263ENST00000508317 SMCR8Q8TEV9 937 aaPredicted RBP20.11■□□□□ 0.81
DDR1-263ENST00000508317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDR1-263ENST00000508317 FCGRTP55899 365 aa20.1■□□□□ 0.81
DDR1-263ENST00000508317 ZNF333Q96JL9 665 aa20.1■□□□□ 0.81
DDR1-263ENST00000508317 GPR75-ASB3A0A0A6YYF3 556 aa20.09■□□□□ 0.81
DDR1-263ENST00000508317 ECM2O94769 699 aaPredicted RBP20.09■□□□□ 0.81
DDR1-263ENST00000508317 CAP1Q01518 475 aa20.09■□□□□ 0.81
DDR1-263ENST00000508317 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
DDR1-263ENST00000508317 NKX2-3Q8TAU0 364 aa20.09■□□□□ 0.81
DDR1-263ENST00000508317 TRIM47Q96LD4 638 aa20.09■□□□□ 0.81
DDR1-263ENST00000508317 TBC1D2Q9BYX2 928 aa20.09■□□□□ 0.81
DDR1-263ENST00000508317 HMG20BQ9P0W2 317 aa20.09■□□□□ 0.81
DDR1-263ENST00000508317 PNMA3Q9UL41 463 aa20.09■□□□□ 0.81
DDR1-263ENST00000508317 NPM3O75607 178 aaKnown RBP20.08■□□□□ 0.81
DDR1-263ENST00000508317 SURF6O75683 361 aaKnown RBP20.08■□□□□ 0.81
DDR1-263ENST00000508317 MYCP01106 439 aaPredicted RBP20.08■□□□□ 0.81
DDR1-263ENST00000508317 PTPRAP18433 802 aa20.08■□□□□ 0.81
DDR1-263ENST00000508317 UBXN2AP68543 259 aa20.08■□□□□ 0.81
DDR1-263ENST00000508317 PABPC4Q13310 644 aaKnown RBP eCLIP20.08■□□□□ 0.81
DDR1-263ENST00000508317 C17orf99Q6UX52 265 aa20.08■□□□□ 0.81
DDR1-263ENST00000508317 ZFPM1Q8IX07 1006 aa20.08■□□□□ 0.81
DDR1-263ENST00000508317 TEX11Q8IYF3 940 aa20.08■□□□□ 0.81
DDR1-263ENST00000508317 GPR108Q9NPR9 543 aa20.08■□□□□ 0.81
DDR1-263ENST00000508317 SRRDQ9UH36 339 aa20.08■□□□□ 0.81
DDR1-263ENST00000508317 COLQQ9Y215 455 aaPredicted RBP20.08■□□□□ 0.81
DDR1-263ENST00000508317 IGSF3O75054 1194 aa20.07■□□□□ 0.8
DDR1-263ENST00000508317 ARID4AP29374 1257 aaPredicted RBP20.07■□□□□ 0.8
DDR1-263ENST00000508317 NAA16Q6N069 864 aaPredicted RBP20.07■□□□□ 0.8
DDR1-263ENST00000508317 TMEM57Q8N5G2 664 aa20.07■□□□□ 0.8
DDR1-263ENST00000508317 SLC45A1Q9Y2W3 748 aa20.07■□□□□ 0.8
DDR1-263ENST00000508317 RANBP2P49792 3224 aaKnown RBP20.06■□□□□ 0.8
DDR1-263ENST00000508317 PNMA6EA0A0J9YXQ4 647 aa20.06■□□□□ 0.8
DDR1-263ENST00000508317 TRIM75PA6NK02 468 aa20.06■□□□□ 0.8
DDR1-263ENST00000508317 TBC1D12O60347 775 aa20.06■□□□□ 0.8
DDR1-263ENST00000508317 MS4A1P11836 297 aa20.06■□□□□ 0.8
DDR1-263ENST00000508317 EN2P19622 333 aaPredicted RBP20.06■□□□□ 0.8
DDR1-263ENST00000508317 NSUN4Q96CB9 384 aaKnown RBP20.06■□□□□ 0.8
DDR1-263ENST00000508317 OSBPL5Q9H0X9 879 aaPredicted RBP20.06■□□□□ 0.8
DDR1-263ENST00000508317 AS3MTQ9HBK9 375 aa20.06■□□□□ 0.8
DDR1-263ENST00000508317 MYPNQ86TC9 1320 aa20.05■□□□□ 0.8
DDR1-263ENST00000508317 A0A0G2JLL6 359 aaPredicted RBP20.05■□□□□ 0.8
DDR1-263ENST00000508317 DDTLA6NHG4 134 aaPredicted RBP20.05■□□□□ 0.8
DDR1-263ENST00000508317 ATP8B2P98198 1209 aa20.05■□□□□ 0.8
DDR1-263ENST00000508317 TBC1D9Q6ZT07 1266 aa20.05■□□□□ 0.8
DDR1-263ENST00000508317 PRRT2Q7Z6L0 340 aaPredicted RBP20.05■□□□□ 0.8
DDR1-263ENST00000508317 SH3TC2Q8TF17 1288 aa20.05■□□□□ 0.8
DDR1-263ENST00000508317 ARHGAP39Q9C0H5 1083 aa20.05■□□□□ 0.8
DDR1-263ENST00000508317 DHX36Q9H2U1 1008 aaKnown RBP20.05■□□□□ 0.8
DDR1-263ENST00000508317 RBBP6Q7Z6E9 1792 aaKnown RBP20.05■□□□□ 0.8
DDR1-263ENST00000508317 PHF20L1A8MW92 1017 aa20.04■□□□□ 0.8
DDR1-263ENST00000508317 GRK4P32298 578 aa20.04■□□□□ 0.8
DDR1-263ENST00000508317 TNNI3KQ59H18 835 aa20.04■□□□□ 0.8
DDR1-263ENST00000508317 CERS3Q8IU89 383 aa20.04■□□□□ 0.8
DDR1-263ENST00000508317 CRACR2BQ8N4Y2 399 aaPredicted RBP20.04■□□□□ 0.8
DDR1-263ENST00000508317 HERC5Q9UII4 1024 aaKnown RBP20.04■□□□□ 0.8
DDR1-263ENST00000508317 AFG3L2Q9Y4W6 797 aa20.04■□□□□ 0.8
DDR1-263ENST00000508317 FPGT-TNNI3KV9GXZ4 949 aa20.04■□□□□ 0.8
DDR1-263ENST00000508317 OTOFQ9HC10 1997 aa20.03■□□□□ 0.8
DDR1-263ENST00000508317 CYP2C8P10632 490 aa20.03■□□□□ 0.8
DDR1-263ENST00000508317 MAP3K10Q02779 954 aa20.03■□□□□ 0.8
DDR1-263ENST00000508317 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
DDR1-263ENST00000508317 COA7Q96BR5 231 aa20.03■□□□□ 0.8
DDR1-263ENST00000508317 DDX4Q9NQI0 724 aaKnown RBP20.03■□□□□ 0.8
DDR1-263ENST00000508317 PI4KBQ9UBF8 816 aa20.03■□□□□ 0.8
DDR1-263ENST00000508317 TNPO2O14787 897 aaKnown RBP20.02■□□□□ 0.8
DDR1-263ENST00000508317 HLA-DOAP06340 250 aa20.02■□□□□ 0.8
DDR1-263ENST00000508317 OSBPP22059 807 aa20.02■□□□□ 0.8
DDR1-263ENST00000508317 MCAMP43121 646 aa20.02■□□□□ 0.8
DDR1-263ENST00000508317 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
DDR1-263ENST00000508317 SLAIN1Q8ND83 568 aa20.02■□□□□ 0.8
DDR1-263ENST00000508317 SNRKQ9NRH2 765 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms