RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SMIM22K7EJ46 135 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 SYKP43405 635 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 NLRP12P59046 1061 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
LIN54-207ENST00000508171 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
LIN54-207ENST00000508171 LRP5O75197 1615 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 TDO2P48775 406 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 RBM6P78332 1123 aaKnown RBP12.64□□□□□ -0.39
LIN54-207ENST00000508171 CCZ1BP86790 482 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 CCZ1P86791 482 aaPredicted RBP12.64□□□□□ -0.39
LIN54-207ENST00000508171 CHRNDQ07001 517 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 SSRP1Q08945 709 aaKnown RBP12.64□□□□□ -0.39
LIN54-207ENST00000508171 NCAPHQ15003 741 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 ADGRA1Q86SQ6 560 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
LIN54-207ENST00000508171 IFNKQ9P0W0 207 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
LIN54-207ENST00000508171 TAF1P21675 1872 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 COL4A1P02462 1669 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 LOC102724428A0A0B4J2F2 783 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 SIK1P57059 783 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 PNOCQ13519 176 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 TRIM29Q14134 588 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 CCDC152Q4G0S7 254 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 SPECC1Q5M775 1068 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 TRMT1Q9NXH9 659 aaKnown RBP12.63□□□□□ -0.39
LIN54-207ENST00000508171 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 HPSEQ9Y251 543 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 PPP6R2O75170 966 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 IGHMBP2P38935 993 aaKnown RBP12.63□□□□□ -0.39
LIN54-207ENST00000508171 DDB1Q16531 1140 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
LIN54-207ENST00000508171 BCL11BQ9C0K0 894 aaPredicted RBP12.63□□□□□ -0.39
LIN54-207ENST00000508171 SMC2O95347 1197 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 NTSR2O95665 410 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 LMOD1P29536 600 aaPredicted RBP12.62□□□□□ -0.39
LIN54-207ENST00000508171 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 SDR42E1Q8WUS8 393 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 ZNF592Q92610 1267 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 KRT23Q9C075 422 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 CTIFO43310 598 aaKnown RBP12.62□□□□□ -0.39
LIN54-207ENST00000508171 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
LIN54-207ENST00000508171 ATP1A3P13637 1013 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
LIN54-207ENST00000508171 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
LIN54-207ENST00000508171 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
LIN54-207ENST00000508171 RGS22Q8NE09 1264 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 HSD3B7Q9H2F3 369 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 ABCF2Q9UG63 623 aa12.62□□□□□ -0.39
LIN54-207ENST00000508171 COL16A1Q07092 1604 aaPredicted RBP12.61□□□□□ -0.39
LIN54-207ENST00000508171 PHLPP1O60346 1717 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 NEMFO60524 1076 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 IFNAR1P17181 557 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 GYG1P46976 350 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 STAG1Q8WVM7 1258 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 TIGD1Q96MW7 591 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 NACAP1Q9BZK3 213 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
LIN54-207ENST00000508171 TUBE1Q9UJT0 475 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 MINDY4BA8MYZ0 360 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 CYP7A1P22680 504 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 GRIN1Q05586 938 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 NAA30Q147X3 362 aaPredicted RBP12.61□□□□□ -0.39
LIN54-207ENST00000508171 WTAPQ15007 396 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 TMC6Q7Z403 805 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 NOSTRINQ8IVI9 506 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 JMYQ8N9B5 988 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 NUP133Q8WUM0 1156 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 MYH2Q9UKX2 1941 aa12.61□□□□□ -0.39
LIN54-207ENST00000508171 PNPLA7Q6ZV29 1317 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 FOXN1O15353 648 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 MMP1P03956 469 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 RTN1Q16799 776 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 CEP135Q66GS9 1140 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 ARMCX5Q6P1M9 558 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 METTL16Q86W50 562 aaKnown RBP12.6□□□□□ -0.39
LIN54-207ENST00000508171 DIS3L2Q8IYB7 885 aaKnown RBP12.6□□□□□ -0.39
LIN54-207ENST00000508171 OSBPL5Q9H0X9 879 aaPredicted RBP12.6□□□□□ -0.39
LIN54-207ENST00000508171 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 SMTNL1A8MU46 457 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 KCNQ2O43526 872 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 GNAT2P19087 354 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 PPARAQ07869 468 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 NR5A1Q13285 461 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 KCNH3Q9ULD8 1083 aa12.6□□□□□ -0.39
LIN54-207ENST00000508171 SPATA31A1Q5TZJ5 1347 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 BAZ2AQ9UIF9 1905 aaKnown RBP12.59□□□□□ -0.39
LIN54-207ENST00000508171 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 KCNQ4P56696 695 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 NYAP1Q6ZVC0 841 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 SMIM5Q71RC9 77 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms