RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 NBPF8Q3BBV2 869 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 TUBB8Q3ZCM7 444 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 HIBCHQ6NVY1 386 aaPredicted RBP8.8□□□□□ -1
PDGFRA-206ENST00000508170 RTL10Q7L3V2 364 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 GALNT5Q7Z7M9 940 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 MIGA1Q8NAN2 632 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 CAMKK2Q96RR4 588 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 TRIM6Q9C030 488 aaPredicted RBP8.8□□□□□ -1
PDGFRA-206ENST00000508170 ALG13Q9NP73 1137 aaKnown RBP8.8□□□□□ -1
PDGFRA-206ENST00000508170 KBTBD4Q9NVX7 518 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 RABL2AQ9UBK7 228 aaPredicted RBP8.8□□□□□ -1
PDGFRA-206ENST00000508170 SEL1LQ9UBV2 794 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 MKL2Q9ULH7 1088 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 PNMA8BQ9ULN7 279 aaPredicted RBP8.8□□□□□ -1
PDGFRA-206ENST00000508170 PHTF1Q9UMS5 762 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 RRP15Q9Y3B9 282 aaKnown RBP8.8□□□□□ -1
PDGFRA-206ENST00000508170 CPLX1O14810 134 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 TPPPO94811 219 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 CCDC175P0C221 793 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 SOX9P48436 509 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 SAFBQ15424 915 aaKnown RBP eCLIP8.8□□□□□ -1
PDGFRA-206ENST00000508170 MTERF2Q49AM1 385 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 USPL1Q5W0Q7 1092 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 RASSF1Q9NS23 344 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 SUN2Q9UH99 717 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 PPP1R9AQ9ULJ8 1098 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 MAPK8IP1Q9UQF2 711 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 SMAD7O15105 426 aaKnown RBP8.79□□□□□ -1
PDGFRA-206ENST00000508170 MAP3K13O43283 966 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 KIF1CO43896 1103 aaKnown RBP8.79□□□□□ -1
PDGFRA-206ENST00000508170 ABLIM3O94929 683 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 TRIM37O94972 964 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 GOLGA2Q08379 1002 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 PKN2Q16513 984 aaKnown RBP8.79□□□□□ -1
PDGFRA-206ENST00000508170 TSGA10IPQ3SY00 556 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 NFXL1Q6ZNB6 911 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 MILR1Q7Z6M3 343 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 DZIP3Q86Y13 1208 aaKnown RBP8.79□□□□□ -1
PDGFRA-206ENST00000508170 TPH2Q8IWU9 490 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 ZMAT2Q96NC0 199 aaKnown RBP8.79□□□□□ -1
PDGFRA-206ENST00000508170 POLR3CQ9BUI4 534 aaPredicted RBP8.79□□□□□ -1
PDGFRA-206ENST00000508170 KIAA1586Q9HCI6 787 aa8.79□□□□□ -1
PDGFRA-206ENST00000508170 RCCD1A6NED2 376 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 MBD4O95243 580 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 RAD52P43351 418 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 CASP7P55210 303 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 PERM1Q5SV97 790 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 DIEXFQ68CQ4 756 aaKnown RBP8.78□□□□□ -1
PDGFRA-206ENST00000508170 TEX9Q8N6V9 391 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 TBATAQ96M53 351 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 YY1AP1Q9H869 796 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 RMI1Q9H9A7 625 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 TRIM64A6NGJ6 449 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 TRIM64BA6NI03 449 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 PHKG2P15735 406 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 ATF7P17544 494 aaPredicted RBP8.78□□□□□ -1
PDGFRA-206ENST00000508170 CCT5P48643 541 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 PRKG2Q13237 762 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 TMED1Q13445 227 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 SLMAPQ14BN4 828 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 LDHAL6AQ6ZMR3 332 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 TTC13Q8NBP0 860 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 POF1BQ8WVV4 589 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 COL26A1Q96A83 441 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 THAP11Q96EK4 314 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 DBNDD1Q9H9R9 158 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 DIAPH3Q9NSV4 1193 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 KDM2BQ8NHM5 1336 aa8.78□□□□□ -1
PDGFRA-206ENST00000508170 ABHD14A-ACY1A0A1B0GW23 586 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 F5H423 210 aaPredicted RBP8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 EYA4O95677 639 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 IFIT1P09914 478 aaKnown RBP8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 CCDC159P0C7I6 412 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 MAPK9P45984 424 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 SMC1AQ14683 1233 aaKnown RBP8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 TAF1CQ15572 869 aaPredicted RBP8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 RILPL1Q5EBL4 403 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 STRA8Q7Z7C7 330 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 RIN3Q8TB24 985 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 CPLX3Q8WVH0 158 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 ADAMTS1Q9UHI8 967 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 CHIC2Q9UKJ5 165 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 SYNDIG1LA6NDD5 238 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 KIF3CO14782 793 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 GFPT2O94808 682 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 CTNNA1P35221 906 aaKnown RBP8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 HSD17B7P56937 341 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 UBASH3AP57075 661 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 GTF2IP78347 998 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 KRT83P78385 493 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 LHFPL2Q6ZUX7 228 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 FAM26EQ8N5C1 309 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 NAXEQ8NCW5 288 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 AFAP1L1Q8TED9 768 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 FBRSQ9HAH7 460 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 NLRC4Q9NPP4 1024 aa8.77□□□□□ -1.01
PDGFRA-206ENST00000508170 PMM2O15305 246 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 GALNSP34059 522 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 ATP13A4Q4VNC1 1196 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms