RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 OTOP1Q7RTM1 612 aa13.64□□□□□ -0.23
PTPN13-207ENST00000508063 ITPRIPQ8IWB1 547 aa13.64□□□□□ -0.23
PTPN13-207ENST00000508063 ZSCAN29Q8IWY8 852 aaPredicted RBP13.64□□□□□ -0.23
PTPN13-207ENST00000508063 EFCC1Q9HA90 598 aa13.64□□□□□ -0.23
PTPN13-207ENST00000508063 HMG20BQ9P0W2 317 aa13.64□□□□□ -0.23
PTPN13-207ENST00000508063 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
PTPN13-207ENST00000508063 INPP5BP32019 993 aa13.63□□□□□ -0.23
PTPN13-207ENST00000508063 MECOMQ03112 1051 aa13.63□□□□□ -0.23
PTPN13-207ENST00000508063 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
PTPN13-207ENST00000508063 NOL9Q5SY16 702 aaKnown RBP13.63□□□□□ -0.23
PTPN13-207ENST00000508063 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
PTPN13-207ENST00000508063 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
PTPN13-207ENST00000508063 SSH3Q8TE77 659 aa13.63□□□□□ -0.23
PTPN13-207ENST00000508063 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
PTPN13-207ENST00000508063 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
PTPN13-207ENST00000508063 SURF6O75683 361 aaKnown RBP13.62□□□□□ -0.23
PTPN13-207ENST00000508063 MS4A1P11836 297 aa13.62□□□□□ -0.23
PTPN13-207ENST00000508063 FAM43AQ8N2R8 423 aa13.62□□□□□ -0.23
PTPN13-207ENST00000508063 NOL10Q9BSC4 688 aaKnown RBP13.62□□□□□ -0.23
PTPN13-207ENST00000508063 RAI14Q9P0K7 980 aa13.62□□□□□ -0.23
PTPN13-207ENST00000508063 LRP2BPQ9P2M1 347 aa13.62□□□□□ -0.23
PTPN13-207ENST00000508063 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
PTPN13-207ENST00000508063 DOCK2Q92608 1830 aa13.62□□□□□ -0.23
PTPN13-207ENST00000508063 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 TLR2O60603 784 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 IGSF3O75054 1194 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 PICALMQ13492 652 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 KIF22Q14807 665 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 TTC39AQ5SRH9 613 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 ZFPM1Q8IX07 1006 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 PICK1Q9NRD5 415 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
PTPN13-207ENST00000508063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
PTPN13-207ENST00000508063 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
PTPN13-207ENST00000508063 RFX7Q2KHR2 1363 aa13.6□□□□□ -0.23
PTPN13-207ENST00000508063 CXCL11O14625 94 aa13.6□□□□□ -0.23
PTPN13-207ENST00000508063 MCAMP43121 646 aa13.6□□□□□ -0.23
PTPN13-207ENST00000508063 MAP3K10Q02779 954 aa13.6□□□□□ -0.23
PTPN13-207ENST00000508063 ANKRD23Q86SG2 305 aa13.6□□□□□ -0.23
PTPN13-207ENST00000508063 SCYL3Q8IZE3 742 aa13.6□□□□□ -0.23
PTPN13-207ENST00000508063 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
PTPN13-207ENST00000508063 NSUN4Q96CB9 384 aaKnown RBP13.6□□□□□ -0.23
PTPN13-207ENST00000508063 C1orf115Q9H7X2 142 aa13.6□□□□□ -0.23
PTPN13-207ENST00000508063 KCNH4Q9UQ05 1017 aa13.6□□□□□ -0.23
PTPN13-207ENST00000508063 BAG3O95817 575 aa13.59□□□□□ -0.23
PTPN13-207ENST00000508063 GNRH1P01148 92 aa13.59□□□□□ -0.23
PTPN13-207ENST00000508063 RLBP1P12271 317 aa13.59□□□□□ -0.23
PTPN13-207ENST00000508063 RHBDL3P58872 404 aa13.59□□□□□ -0.23
PTPN13-207ENST00000508063 PI16Q6UXB8 463 aa13.59□□□□□ -0.23
PTPN13-207ENST00000508063 TBC1D9Q6ZT07 1266 aa13.59□□□□□ -0.23
PTPN13-207ENST00000508063 ERC1Q8IUD2 1116 aa13.59□□□□□ -0.23
PTPN13-207ENST00000508063 ZNF512BQ96KM6 892 aaPredicted RBP13.59□□□□□ -0.23
PTPN13-207ENST00000508063 ATRNL1Q5VV63 1379 aa13.58□□□□□ -0.23
PTPN13-207ENST00000508063 DDTLA6NHG4 134 aaPredicted RBP13.58□□□□□ -0.24
PTPN13-207ENST00000508063 PHF20L1A8MW92 1017 aa13.58□□□□□ -0.24
PTPN13-207ENST00000508063 PDHXO00330 501 aa13.58□□□□□ -0.24
PTPN13-207ENST00000508063 TBC1D12O60347 775 aa13.58□□□□□ -0.24
PTPN13-207ENST00000508063 CTNND1O60716 968 aaKnown RBP13.58□□□□□ -0.24
PTPN13-207ENST00000508063 PLCG2P16885 1265 aa13.58□□□□□ -0.24
PTPN13-207ENST00000508063 NAA16Q6N069 864 aaPredicted RBP13.58□□□□□ -0.24
PTPN13-207ENST00000508063 SH3BP5LQ7L8J4 393 aa13.58□□□□□ -0.24
PTPN13-207ENST00000508063 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
PTPN13-207ENST00000508063 NBPF11Q86T75 865 aa13.58□□□□□ -0.24
PTPN13-207ENST00000508063 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
PTPN13-207ENST00000508063 DDX4Q9NQI0 724 aaKnown RBP13.58□□□□□ -0.24
PTPN13-207ENST00000508063 COL2A1P02458 1487 aaPredicted RBP13.57□□□□□ -0.24
PTPN13-207ENST00000508063 PRMT2P55345 433 aa13.57□□□□□ -0.24
PTPN13-207ENST00000508063 HSP90AB4PQ58FF6 505 aa13.57□□□□□ -0.24
PTPN13-207ENST00000508063 CEP85Q6P2H3 762 aa13.57□□□□□ -0.24
PTPN13-207ENST00000508063 TEX11Q8IYF3 940 aa13.57□□□□□ -0.24
PTPN13-207ENST00000508063 ZNF384Q8TF68 577 aa13.57□□□□□ -0.24
PTPN13-207ENST00000508063 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
PTPN13-207ENST00000508063 PARK7Q99497 189 aaKnown RBP13.57□□□□□ -0.24
PTPN13-207ENST00000508063 ZHX2Q9Y6X8 837 aa13.57□□□□□ -0.24
PTPN13-207ENST00000508063 PTPRAP18433 802 aa13.56□□□□□ -0.24
PTPN13-207ENST00000508063 LACTBP83111 547 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-207ENST00000508063 C17orf99Q6UX52 265 aa13.56□□□□□ -0.24
PTPN13-207ENST00000508063 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
PTPN13-207ENST00000508063 OSBPL5Q9H0X9 879 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-207ENST00000508063 CHMP4BQ9H444 224 aaKnown RBP13.56□□□□□ -0.24
PTPN13-207ENST00000508063 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPN13-207ENST00000508063 SNRKQ9NRH2 765 aa13.56□□□□□ -0.24
PTPN13-207ENST00000508063 MAST2Q6P0Q8 1798 aa13.55□□□□□ -0.24
PTPN13-207ENST00000508063 DOCK1Q14185 1865 aa13.55□□□□□ -0.24
PTPN13-207ENST00000508063 A0A0G2JLL6 359 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-207ENST00000508063 HOXD10P28358 340 aa13.55□□□□□ -0.24
PTPN13-207ENST00000508063 SLC9C1Q4G0N8 1177 aa13.55□□□□□ -0.24
PTPN13-207ENST00000508063 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-207ENST00000508063 PRRT2Q7Z6L0 340 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-207ENST00000508063 PANK1Q8TE04 598 aa13.55□□□□□ -0.24
PTPN13-207ENST00000508063 DHX36Q9H2U1 1008 aaKnown RBP13.55□□□□□ -0.24
PTPN13-207ENST00000508063 HERC5Q9UII4 1024 aaKnown RBP13.55□□□□□ -0.24
PTPN13-207ENST00000508063 SLC45A1Q9Y2W3 748 aa13.55□□□□□ -0.24
PTPN13-207ENST00000508063 AFG3L2Q9Y4W6 797 aa13.55□□□□□ -0.24
PTPN13-207ENST00000508063 TNRC18O15417 2968 aaPredicted RBP13.54□□□□□ -0.24
PTPN13-207ENST00000508063 CYP2E1P05181 493 aaPredicted RBP13.54□□□□□ -0.24
PTPN13-207ENST00000508063 ZAP70P43403 619 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 PPP4CP60510 307 aa13.54□□□□□ -0.24
PTPN13-207ENST00000508063 MOGSQ13724 837 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms