RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 OPTNQ96CV9 577 aa18.42■□□□□ 0.54
CLDND1-215ENST00000507874 ZNF341Q9BYN7 854 aa18.42■□□□□ 0.54
CLDND1-215ENST00000507874 AATFQ9NY61 560 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 CSADQ9Y600 493 aa18.42■□□□□ 0.54
CLDND1-215ENST00000507874 ATRNL1Q5VV63 1379 aa18.42■□□□□ 0.54
CLDND1-215ENST00000507874 DDTLA6NHG4 134 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 MANSC4A6NHS7 340 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 IGSF3O75054 1194 aa18.42■□□□□ 0.54
CLDND1-215ENST00000507874 MAP4K4O95819 1239 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 ZSCAN29Q8IWY8 852 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 SH3RF3Q8TEJ3 882 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 ZKSCAN4Q969J2 545 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 NOL10Q9BSC4 688 aaKnown RBP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 SNCAIPQ9Y6H5 919 aa18.42■□□□□ 0.54
CLDND1-215ENST00000507874 NPM3O75607 178 aaKnown RBP18.41■□□□□ 0.54
CLDND1-215ENST00000507874 INPP5BP32019 993 aa18.41■□□□□ 0.54
CLDND1-215ENST00000507874 PPP4CP60510 307 aa18.41■□□□□ 0.54
CLDND1-215ENST00000507874 TEX11Q8IYF3 940 aa18.41■□□□□ 0.54
CLDND1-215ENST00000507874 ZNF112Q9UJU3 913 aa18.41■□□□□ 0.54
CLDND1-215ENST00000507874 CDK5RAP2Q96SN8 1893 aa18.41■□□□□ 0.54
CLDND1-215ENST00000507874 CASP8AP2Q9UKL3 1982 aa18.4■□□□□ 0.54
CLDND1-215ENST00000507874 SPDYE5A6NIY4 337 aa18.4■□□□□ 0.54
CLDND1-215ENST00000507874 BAG3O95817 575 aa18.4■□□□□ 0.54
CLDND1-215ENST00000507874 SLURP2P0DP57 97 aa18.4■□□□□ 0.54
CLDND1-215ENST00000507874 CYP7A1P22680 504 aa18.4■□□□□ 0.54
CLDND1-215ENST00000507874 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
CLDND1-215ENST00000507874 MAGEB6Q8N7X4 407 aa18.39■□□□□ 0.53
CLDND1-215ENST00000507874 EDC3Q96F86 508 aaKnown RBP18.39■□□□□ 0.53
CLDND1-215ENST00000507874 OTUD5Q96G74 571 aa18.39■□□□□ 0.53
CLDND1-215ENST00000507874 OSBPL5Q9H0X9 879 aaPredicted RBP18.39■□□□□ 0.53
CLDND1-215ENST00000507874 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.53
CLDND1-215ENST00000507874 FOCADQ5VW36 1801 aa18.39■□□□□ 0.53
CLDND1-215ENST00000507874 COL2A1P02458 1487 aaPredicted RBP18.38■□□□□ 0.53
CLDND1-215ENST00000507874 GOLIM4O00461 696 aa18.38■□□□□ 0.53
CLDND1-215ENST00000507874 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
CLDND1-215ENST00000507874 PLCG2P16885 1265 aa18.38■□□□□ 0.53
CLDND1-215ENST00000507874 ATP5JP18859 108 aa18.38■□□□□ 0.53
CLDND1-215ENST00000507874 INHBEP58166 350 aa18.38■□□□□ 0.53
CLDND1-215ENST00000507874 DYNLL1P63167 89 aaKnown RBP18.38■□□□□ 0.53
CLDND1-215ENST00000507874 MAP3K12Q12852 859 aa18.38■□□□□ 0.53
CLDND1-215ENST00000507874 TTF1Q15361 905 aaPredicted RBP18.38■□□□□ 0.53
CLDND1-215ENST00000507874 ERO1BQ86YB8 467 aa18.38■□□□□ 0.53
CLDND1-215ENST00000507874 IFNL1Q8IU54 200 aa18.38■□□□□ 0.53
CLDND1-215ENST00000507874 PHF20L1A8MW92 1017 aa18.37■□□□□ 0.53
CLDND1-215ENST00000507874 IGF2BP3O00425 579 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLDND1-215ENST00000507874 MAP3K10Q02779 954 aa18.37■□□□□ 0.53
CLDND1-215ENST00000507874 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
CLDND1-215ENST00000507874 MIGA1Q8NAN2 632 aa18.37■□□□□ 0.53
CLDND1-215ENST00000507874 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
CLDND1-215ENST00000507874 MS4A4AQ96JQ5 239 aa18.37■□□□□ 0.53
CLDND1-215ENST00000507874 TESPA1A2RU30 521 aaPredicted RBP18.36■□□□□ 0.53
CLDND1-215ENST00000507874 NOL9Q5SY16 702 aaKnown RBP18.36■□□□□ 0.53
CLDND1-215ENST00000507874 SIPA1L1O43166 1804 aa18.36■□□□□ 0.53
CLDND1-215ENST00000507874 FLT1P17948 1338 aa18.35■□□□□ 0.53
CLDND1-215ENST00000507874 FAM196BA6NMK8 535 aa18.35■□□□□ 0.53
CLDND1-215ENST00000507874 MAPKAPK5Q8IW41 473 aa18.35■□□□□ 0.53
CLDND1-215ENST00000507874 HAUS7Q99871 368 aa18.35■□□□□ 0.53
CLDND1-215ENST00000507874 PTPN18Q99952 460 aa18.35■□□□□ 0.53
CLDND1-215ENST00000507874 R3HDMLQ9H3Y0 253 aa18.35■□□□□ 0.53
CLDND1-215ENST00000507874 PAG1Q9NWQ8 432 aa18.35■□□□□ 0.53
CLDND1-215ENST00000507874 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 IRF6O14896 467 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 ALDH1A1P00352 501 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 PDE6AP16499 860 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 GTF2A2P52657 109 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 PPIL2Q13356 520 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 CCL15Q16663 113 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 TMED8Q6PL24 325 aaPredicted RBP18.34■□□□□ 0.53
CLDND1-215ENST00000507874 BRI3BPQ8WY22 251 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 CFHR5Q9BXR6 569 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 DOCK1Q14185 1865 aa18.34■□□□□ 0.53
CLDND1-215ENST00000507874 TBC1D12O60347 775 aa18.33■□□□□ 0.53
CLDND1-215ENST00000507874 PPATQ06203 517 aa18.33■□□□□ 0.53
CLDND1-215ENST00000507874 SLC9C2Q5TAH2 1124 aa18.33■□□□□ 0.53
CLDND1-215ENST00000507874 SCYL3Q8IZE3 742 aa18.33■□□□□ 0.53
CLDND1-215ENST00000507874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.33■□□□□ 0.531e-6■■■□□ 18.4
CLDND1-215ENST00000507874 ECHDC1Q9NTX5 307 aa18.33■□□□□ 0.53
CLDND1-215ENST00000507874 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.53
CLDND1-215ENST00000507874 ZNF532Q9HCE3 1301 aa18.33■□□□□ 0.52
CLDND1-215ENST00000507874 TCRBV5S4A2TA0A5A2 114 aa18.32■□□□□ 0.52
CLDND1-215ENST00000507874 RIOK1Q9BRS2 568 aaKnown RBP18.32■□□□□ 0.52
CLDND1-215ENST00000507874 MYH1P12882 1939 aa18.31■□□□□ 0.52
CLDND1-215ENST00000507874 MYH7P12883 1935 aa18.31■□□□□ 0.52
CLDND1-215ENST00000507874 GPR25O00155 361 aa18.31■□□□□ 0.52
CLDND1-215ENST00000507874 TSHZ3Q63HK5 1081 aa18.31■□□□□ 0.52
CLDND1-215ENST00000507874 OTUD7BQ6GQQ9 843 aa18.31■□□□□ 0.52
CLDND1-215ENST00000507874 CERS3Q8IU89 383 aa18.31■□□□□ 0.52
CLDND1-215ENST00000507874 EXOC6Q8TAG9 804 aa18.31■□□□□ 0.52
CLDND1-215ENST00000507874 ZNF296Q8WUU4 475 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-215ENST00000507874 DHX36Q9H2U1 1008 aaKnown RBP18.31■□□□□ 0.52
CLDND1-215ENST00000507874 SAP30BPQ9UHR5 308 aaKnown RBP18.31■□□□□ 0.52
CLDND1-215ENST00000507874 MAGEB6P1A0A0J9YX57 407 aa18.3■□□□□ 0.52
CLDND1-215ENST00000507874 CTNND1O60716 968 aaKnown RBP18.3■□□□□ 0.52
CLDND1-215ENST00000507874 CETPP11597 493 aa18.3■□□□□ 0.52
CLDND1-215ENST00000507874 SNAPC2Q13487 334 aa18.3■□□□□ 0.52
CLDND1-215ENST00000507874 HDAC1Q13547 482 aaPredicted RBP18.3■□□□□ 0.52
CLDND1-215ENST00000507874 AAMPQ13685 434 aa18.3■□□□□ 0.52
CLDND1-215ENST00000507874 SLFNL1Q499Z3 407 aa18.3■□□□□ 0.52
CLDND1-215ENST00000507874 NOM1Q5C9Z4 860 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms