RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 SH3RF3Q8TEJ3 882 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 DCTPP1Q9H773 170 aa17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 SAGE1Q9NXZ1 904 aa17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 OTOFQ9HC10 1997 aa17.23■□□□□ 0.35
CCHCR1-222ENST00000507459 DDTLA6NHG4 134 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-222ENST00000507459 MANSC4A6NHS7 340 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-222ENST00000507459 SH3BP5LQ7L8J4 393 aa17.23■□□□□ 0.35
CCHCR1-222ENST00000507459 MAGEB6Q8N7X4 407 aa17.23■□□□□ 0.35
CCHCR1-222ENST00000507459 INPP5BP32019 993 aa17.22■□□□□ 0.35
CCHCR1-222ENST00000507459 MAP3K12Q12852 859 aa17.22■□□□□ 0.35
CCHCR1-222ENST00000507459 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
CCHCR1-222ENST00000507459 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
CCHCR1-222ENST00000507459 RFX7Q2KHR2 1363 aa17.22■□□□□ 0.35
CCHCR1-222ENST00000507459 CASP8AP2Q9UKL3 1982 aa17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 GOLIM4O00461 696 aa17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 TBC1D8O95759 1140 aa17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 MAP4K4O95819 1239 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 DYNLL1P63167 89 aaKnown RBP17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 TTF1Q15361 905 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 MIGA1Q8NAN2 632 aa17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 SNCAIPQ9Y6H5 919 aa17.21■□□□□ 0.35
CCHCR1-222ENST00000507459 IGSF3O75054 1194 aa17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 PLCG2P16885 1265 aa17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 INHBEP58166 350 aa17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 PPP4CP60510 307 aa17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 ERO1BQ86YB8 467 aa17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 EDC3Q96F86 508 aaKnown RBP17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
CCHCR1-222ENST00000507459 SPDYE5A6NIY4 337 aa17.19■□□□□ 0.34
CCHCR1-222ENST00000507459 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
CCHCR1-222ENST00000507459 ATP5JP18859 108 aa17.19■□□□□ 0.34
CCHCR1-222ENST00000507459 MAPKAPK5Q8IW41 473 aa17.19■□□□□ 0.34
CCHCR1-222ENST00000507459 OSBPL5Q9H0X9 879 aaPredicted RBP17.19■□□□□ 0.34
CCHCR1-222ENST00000507459 ZNF112Q9UJU3 913 aa17.19■□□□□ 0.34
CCHCR1-222ENST00000507459 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCHCR1-222ENST00000507459 SLC9C2Q5TAH2 1124 aa17.18■□□□□ 0.34
CCHCR1-222ENST00000507459 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
CCHCR1-222ENST00000507459 MS4A4AQ96JQ5 239 aa17.18■□□□□ 0.34
CCHCR1-222ENST00000507459 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
CCHCR1-222ENST00000507459 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
CCHCR1-222ENST00000507459 ATRNL1Q5VV63 1379 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 CCL15-CCL14A0A0B4J2E2 113 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 PHF20L1A8MW92 1017 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 ALDH1A1P00352 501 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 GTF2A2P52657 109 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 CCL15Q16663 113 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 OTUD7BQ6GQQ9 843 aa17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCHCR1-222ENST00000507459 IRF6O14896 467 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 CAPN15O75808 1086 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 PDE6AP16499 860 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 PPIL2Q13356 520 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 TSHZ3Q63HK5 1081 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 BRI3BPQ8WY22 251 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 HAUS7Q99871 368 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 PTPN18Q99952 460 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 R3HDMLQ9H3Y0 253 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 ECHDC1Q9NTX5 307 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 SAP30BPQ9UHR5 308 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 FLT1P17948 1338 aa17.16■□□□□ 0.34
CCHCR1-222ENST00000507459 TESPA1A2RU30 521 aaPredicted RBP17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 USP5P45974 858 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 PPATQ06203 517 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 SLC4A8Q2Y0W8 1093 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 NOL9Q5SY16 702 aaKnown RBP17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 GPATCH3Q96I76 525 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 PICK1Q9NRD5 415 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 PALD1Q9ULE6 856 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
CCHCR1-222ENST00000507459 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 GPR25O00155 361 aa17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 TBC1D12O60347 775 aa17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 CETPP11597 493 aa17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 SCYL3Q8IZE3 742 aa17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 ZNF296Q8WUU4 475 aaPredicted RBP17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 DHX36Q9H2U1 1008 aaKnown RBP17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 PI4KBQ9UBF8 816 aa17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
CCHCR1-222ENST00000507459 CTNND1O60716 968 aaKnown RBP17.13■□□□□ 0.33
CCHCR1-222ENST00000507459 DGKZQ13574 1117 aa17.13■□□□□ 0.33
CCHCR1-222ENST00000507459 SLFNL1Q499Z3 407 aa17.13■□□□□ 0.33
CCHCR1-222ENST00000507459 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
CCHCR1-222ENST00000507459 TMED8Q6PL24 325 aaPredicted RBP17.13■□□□□ 0.33
CCHCR1-222ENST00000507459 CERS3Q8IU89 383 aa17.13■□□□□ 0.33
CCHCR1-222ENST00000507459 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■■■□ 26
CCHCR1-222ENST00000507459 ZHX2Q9Y6X8 837 aa17.13■□□□□ 0.33
CCHCR1-222ENST00000507459 COL2A1P02458 1487 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-222ENST00000507459 CRHR2Q13324 411 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms