RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 ARHGAP27Q6ZUM4 889 aa4.78□□□□□ -1.64
SRPK1-208ENST00000507292 CSRNP1Q96S65 589 aa4.78□□□□□ -1.64
SRPK1-208ENST00000507292 DNAJC25Q9H1X3 360 aa4.78□□□□□ -1.64
SRPK1-208ENST00000507292 USTQ9Y2C2 406 aa4.78□□□□□ -1.64
SRPK1-208ENST00000507292 IGHA2P01877 340 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 NEFMP07197 916 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 PRKCQQ04759 706 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 AOC3Q16853 763 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 PI16Q6UXB8 463 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 ATG4DQ86TL0 474 aaPredicted RBP4.77□□□□□ -1.65
SRPK1-208ENST00000507292 PDZD3Q86UT5 571 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 TOP6BLQ8N6T0 577 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 LRRN4CLQ8ND94 238 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 PI4K2BQ8TCG2 481 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 STK35Q8TDR2 534 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 FAM168AQ92567 244 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 CITED4Q96RK1 184 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 DUSP23Q9BVJ7 150 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 SSU72Q9NP77 194 aaKnown RBP4.77□□□□□ -1.65
SRPK1-208ENST00000507292 KRT82Q9NSB4 513 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 TMEM39AQ9NV64 488 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 VAV3Q9UKW4 847 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 PCOLCE2Q9UKZ9 415 aa4.77□□□□□ -1.65
SRPK1-208ENST00000507292 CEACAM5P06731 702 aa4.76□□□□□ -1.65
SRPK1-208ENST00000507292 ITIH2P19823 946 aa4.76□□□□□ -1.65
SRPK1-208ENST00000507292 OXCT1P55809 520 aa4.76□□□□□ -1.65
SRPK1-208ENST00000507292 PPP2R3AQ06190 1150 aa4.76□□□□□ -1.65
SRPK1-208ENST00000507292 IFI16Q16666 785 aaKnown RBP4.76□□□□□ -1.65
SRPK1-208ENST00000507292 SULF2Q8IWU5 870 aa4.76□□□□□ -1.65
SRPK1-208ENST00000507292 ISL2Q96A47 359 aa4.76□□□□□ -1.65
SRPK1-208ENST00000507292 PLAGL2Q9UPG8 496 aa4.76□□□□□ -1.65
SRPK1-208ENST00000507292 FARP2O94887 1054 aaPredicted RBP4.75□□□□□ -1.65
SRPK1-208ENST00000507292 MAP1SQ66K74 1059 aaPredicted RBP4.75□□□□□ -1.65
SRPK1-208ENST00000507292 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.75□□□□□ -1.65
SRPK1-208ENST00000507292 HRASLS5Q96KN8 279 aa4.75□□□□□ -1.65
SRPK1-208ENST00000507292 PRDM7Q9NQW5 492 aa4.75□□□□□ -1.65
SRPK1-208ENST00000507292 NLRP2Q9NX02 1062 aa4.75□□□□□ -1.65
SRPK1-208ENST00000507292 PPP4R2Q9NY27 417 aa4.75□□□□□ -1.65
SRPK1-208ENST00000507292 AKAP2Q9Y2D5 859 aa4.75□□□□□ -1.65
SRPK1-208ENST00000507292 TMEM265A0A087WTH1 108 aa4.74□□□□□ -1.65
SRPK1-208ENST00000507292 ARNTP27540 789 aa4.74□□□□□ -1.65
SRPK1-208ENST00000507292 HNRNPUQ00839 825 aaKnown RBP eCLIP4.74□□□□□ -1.65
SRPK1-208ENST00000507292 ZC3H12AQ5D1E8 599 aaKnown RBP4.74□□□□□ -1.65
SRPK1-208ENST00000507292 MPRIPQ6WCQ1 1025 aa4.74□□□□□ -1.65
SRPK1-208ENST00000507292 TXNDC2Q86VQ3 553 aa4.74□□□□□ -1.65
SRPK1-208ENST00000507292 DMRTB1Q96MA1 342 aa4.74□□□□□ -1.65
SRPK1-208ENST00000507292 HEXIM2Q96MH2 286 aaKnown RBP4.74□□□□□ -1.65
SRPK1-208ENST00000507292 BCO2Q9BYV7 579 aa4.74□□□□□ -1.65
SRPK1-208ENST00000507292 MKNK2Q9HBH9 465 aa4.74□□□□□ -1.65
SRPK1-208ENST00000507292 CSADQ9Y600 493 aa4.74□□□□□ -1.65
SRPK1-208ENST00000507292 ANGEL2Q5VTE6 544 aaKnown RBP4.73□□□□□ -1.65
SRPK1-208ENST00000507292 NXPE4Q6UWF7 544 aa4.73□□□□□ -1.65
SRPK1-208ENST00000507292 RNF214Q8ND24 703 aa4.73□□□□□ -1.65
SRPK1-208ENST00000507292 GPBAR1Q8TDU6 330 aa4.73□□□□□ -1.65
SRPK1-208ENST00000507292 ALKBH8Q96BT7 664 aaKnown RBP4.73□□□□□ -1.65
SRPK1-208ENST00000507292 ACSBG1Q96GR2 724 aa4.73□□□□□ -1.65
SRPK1-208ENST00000507292 RBCK1Q9BYM8 510 aa4.73□□□□□ -1.65
SRPK1-208ENST00000507292 CBX8Q9HC52 389 aa4.73□□□□□ -1.65
SRPK1-208ENST00000507292 DBX1A6NMT0 343 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 NME2P22392 152 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 ERVK-24P63145 666 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 IKZF1Q13422 519 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 PKN1Q16512 942 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.72□□□□□ -1.65
SRPK1-208ENST00000507292 PPM1JQ5JR12 505 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 TMC7Q7Z402 723 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 UBE3DQ7Z6J8 389 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 KSR1Q8IVT5 923 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 TMEM40Q8WWA1 233 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 TNKS2Q9H2K2 1166 aa4.72□□□□□ -1.65
SRPK1-208ENST00000507292 DCDC2CA8MYV0 355 aa4.71□□□□□ -1.66
SRPK1-208ENST00000507292 XRCC5P13010 732 aaKnown RBP4.71□□□□□ -1.66
SRPK1-208ENST00000507292 ZP2Q05996 745 aa4.71□□□□□ -1.66
SRPK1-208ENST00000507292 ZNF252P-AS1Q0IIN9 211 aa4.71□□□□□ -1.66
SRPK1-208ENST00000507292 SLC23A3Q6PIS1 610 aa4.71□□□□□ -1.66
SRPK1-208ENST00000507292 FAM214BQ7L5A3 538 aa4.71□□□□□ -1.66
SRPK1-208ENST00000507292 GRIN3AQ8TCU5 1115 aa4.71□□□□□ -1.66
SRPK1-208ENST00000507292 EMILIN2Q9BXX0 1053 aa4.71□□□□□ -1.66
SRPK1-208ENST00000507292 PICK1Q9NRD5 415 aa4.71□□□□□ -1.66
SRPK1-208ENST00000507292 PNMA6FA0A0J9YX94 578 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 LRRC10BA6NIK2 292 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 TPTE2Q6XPS3 522 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 C12orf40Q86WS4 652 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 SPACA3Q8IXA5 215 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 SLC38A3Q99624 504 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 ARID3AQ99856 593 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 PRDM10Q9NQV6 1147 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.7□□□□□ -1.66
SRPK1-208ENST00000507292 GTF2IRD1Q9UHL9 959 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 SNX11Q9Y5W9 270 aa4.7□□□□□ -1.66
SRPK1-208ENST00000507292 SOWAHDA6NJG2 315 aa4.69□□□□□ -1.66
SRPK1-208ENST00000507292 SUPT5HO00267 1087 aaKnown RBP4.69□□□□□ -1.66
SRPK1-208ENST00000507292 FBXO24O75426 580 aa4.69□□□□□ -1.66
SRPK1-208ENST00000507292 PAGE1O75459 146 aa4.69□□□□□ -1.66
SRPK1-208ENST00000507292 NTF4P34130 210 aa4.69□□□□□ -1.66
SRPK1-208ENST00000507292 KCNMB1Q16558 191 aa4.69□□□□□ -1.66
SRPK1-208ENST00000507292 MLANAQ16655 118 aa4.69□□□□□ -1.66
SRPK1-208ENST00000507292 NKPD1Q17RQ9 610 aa4.69□□□□□ -1.66
SRPK1-208ENST00000507292 ZSWIM9Q86XI8 627 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms