RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 SLFNL1Q499Z3 407 aa11.72□□□□□ -0.53
SFXN1-205ENST00000506963 BMP2KLQ5H9B9 411 aa11.72□□□□□ -0.53
SFXN1-205ENST00000506963 NBPF12Q5TAG4 269 aaPredicted RBP11.72□□□□□ -0.53
SFXN1-205ENST00000506963 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
SFXN1-205ENST00000506963 HHIPL1Q96JK4 782 aa11.72□□□□□ -0.53
SFXN1-205ENST00000506963 STRBPQ96SI9 672 aaKnown RBP11.72□□□□□ -0.53
SFXN1-205ENST00000506963 CRNKL1Q9BZJ0 848 aaKnown RBP11.72□□□□□ -0.53
SFXN1-205ENST00000506963 OSBPL5Q9H0X9 879 aaPredicted RBP11.72□□□□□ -0.53
SFXN1-205ENST00000506963 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
SFXN1-205ENST00000506963 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
SFXN1-205ENST00000506963 FLT1P17948 1338 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 MYH1P12882 1939 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 HIP1O00291 1037 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 MBD4O95243 580 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 SDSP20132 328 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 PRAMEF18Q5VWM3 479 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 SH3BP5LQ7L8J4 393 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 SAPCD2Q86UD0 394 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 METTL16Q86W50 562 aaKnown RBP11.71□□□□□ -0.53
SFXN1-205ENST00000506963 CDAN1Q8IWY9 1227 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 ZFPM1Q8IX07 1006 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 AIDAQ96BJ3 306 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 DHX36Q9H2U1 1008 aaKnown RBP11.71□□□□□ -0.53
SFXN1-205ENST00000506963 GBA2Q9HCG7 927 aaPredicted RBP11.71□□□□□ -0.53
SFXN1-205ENST00000506963 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.53
SFXN1-205ENST00000506963 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 PPP1R12BO60237 982 aaPredicted RBP11.7□□□□□ -0.54
SFXN1-205ENST00000506963 TBC1D12O60347 775 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 GNAT2P19087 354 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 TCP10Q12799 353 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 PICALMQ13492 652 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 LDLRAD1Q5T700 205 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 GIMAP6Q6P9H5 292 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 C2orf69Q8N8R5 385 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 TGFBRAP1Q8WUH2 860 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 RILPL2Q969X0 211 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 ARMT1Q9H993 441 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 NAV1Q8NEY1 1877 aa11.7□□□□□ -0.54
SFXN1-205ENST00000506963 DDTLA6NHG4 134 aaPredicted RBP11.69□□□□□ -0.54
SFXN1-205ENST00000506963 RASSF10A6NK89 507 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 M0R2C6 588 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 GPAA1O43292 621 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 USP2O75604 605 aaPredicted RBP11.69□□□□□ -0.54
SFXN1-205ENST00000506963 MCMDC2Q4G0Z9 681 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 DCAF15Q66K64 600 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 ARMC9Q7Z3E5 817 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 MAPKAPK5Q8IW41 473 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 CSRNP1Q96S65 589 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 EHD4Q9H223 541 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 ZNF408Q9H9D4 720 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 DCP1AQ9NPI6 582 aaPredicted RBP11.69□□□□□ -0.54
SFXN1-205ENST00000506963 PI4KBQ9UBF8 816 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 ZNF112Q9UJU3 913 aa11.69□□□□□ -0.54
SFXN1-205ENST00000506963 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 GSG1L2A8MUP6 293 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 PRKAB2O43741 272 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 USP5P45974 858 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 NMIQ13287 307 aaPredicted RBP11.68□□□□□ -0.54
SFXN1-205ENST00000506963 TTC6Q86TZ1 520 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 FOXP4Q8IVH2 680 aaPredicted RBP11.68□□□□□ -0.54
SFXN1-205ENST00000506963 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 KLRG1Q96E93 195 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 FAM227BQ96M60 508 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
SFXN1-205ENST00000506963 HERC5Q9UII4 1024 aaKnown RBP11.68□□□□□ -0.54
SFXN1-205ENST00000506963 OTOFQ9HC10 1997 aa11.68□□□□□ -0.54
SFXN1-205ENST00000506963 BAZ2AQ9UIF9 1905 aaKnown RBP11.68□□□□□ -0.54
SFXN1-205ENST00000506963 RAD50Q92878 1312 aa11.67□□□□□ -0.54
SFXN1-205ENST00000506963 PATL2C9JE40 543 aaKnown RBP11.67□□□□□ -0.54
SFXN1-205ENST00000506963 CHMLP26374 656 aa11.67□□□□□ -0.54
SFXN1-205ENST00000506963 IREB2P48200 963 aaKnown RBP11.67□□□□□ -0.54
SFXN1-205ENST00000506963 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
SFXN1-205ENST00000506963 ZSCAN29Q8IWY8 852 aaPredicted RBP11.67□□□□□ -0.54
SFXN1-205ENST00000506963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.54
SFXN1-205ENST00000506963 ZNF341Q9BYN7 854 aa11.67□□□□□ -0.54
SFXN1-205ENST00000506963 DIAPH3Q9NSV4 1193 aa11.67□□□□□ -0.54
SFXN1-205ENST00000506963 PALD1Q9ULE6 856 aa11.67□□□□□ -0.54
SFXN1-205ENST00000506963 ANGEL1Q9UNK9 670 aaKnown RBP11.67□□□□□ -0.54
SFXN1-205ENST00000506963 SLC4A4Q9Y6R1 1079 aa11.67□□□□□ -0.54
SFXN1-205ENST00000506963 ZMYM6O95789 1325 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 CCDC171Q6TFL3 1326 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 PHF20L1A8MW92 1017 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 FOXP2O15409 715 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 HLA-DOAP06340 250 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
SFXN1-205ENST00000506963 HUNKP57058 714 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 GABPAQ06546 454 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 ALX1Q15699 326 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
SFXN1-205ENST00000506963 MOB2Q70IA6 237 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 ANKRD13AQ8IZ07 590 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 MCM9Q9NXL9 1143 aa11.66□□□□□ -0.54
SFXN1-205ENST00000506963 ARPP21Q9UBL0 812 aaPredicted RBP11.66□□□□□ -0.54
SFXN1-205ENST00000506963 ABT1Q9ULW3 272 aaKnown RBP11.66□□□□□ -0.54
SFXN1-205ENST00000506963 LAMB1P07942 1786 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms