RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 STK32AQ8WU08 396 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 RILPL2Q969X0 211 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 ABHD17AQ96GS6 310 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 PHACTR1Q9C0D0 580 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 RBSNQ9H1K0 784 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 NDFIP2Q9NV92 336 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 PHF24Q9UPV7 400 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 PCDHGC4Q9Y5F7 938 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
CLDND1-213ENST00000506927 KDRP35968 1356 aa6.96□□□□□ -1.29
CLDND1-213ENST00000506927 MAP3K5Q99683 1374 aa6.96□□□□□ -1.29
CLDND1-213ENST00000506927 CRB1P82279 1406 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 PTPRUQ92729 1446 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 SYCE3A1L190 88 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 GOLGA6L4A6NEF3 574 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 ATXN7O15265 892 aaPredicted RBP6.96□□□□□ -1.3
CLDND1-213ENST00000506927 CCDC192P0DO97 292 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.3
CLDND1-213ENST00000506927 IGFBP4P22692 258 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 VPS53Q5VIR6 699 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 C1orf53Q5VUE5 145 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 GPT2Q8TD30 523 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 MEIS3Q99687 375 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 THUMPD2Q9BTF0 503 aaKnown RBP6.96□□□□□ -1.3
CLDND1-213ENST00000506927 SCAND2PQ9GZW5 306 aaPredicted RBP6.96□□□□□ -1.3
CLDND1-213ENST00000506927 ATXN7L1Q9ULK2 861 aaPredicted RBP6.96□□□□□ -1.3
CLDND1-213ENST00000506927 R3HCC1Q9Y3T6 440 aaKnown RBP6.96□□□□□ -1.3
CLDND1-213ENST00000506927 CYP46A1Q9Y6A2 500 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 GJA3Q9Y6H8 435 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 ACEP12821 1306 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 RAD50Q92878 1312 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 NALCNQ8IZF0 1738 aa6.96□□□□□ -1.3
CLDND1-213ENST00000506927 N4BP2Q86UW6 1770 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-213ENST00000506927 OVOS2A0A0J9YW53 1432 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 USP6P35125 1406 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 OVOS2Q6IE36 1432 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 ADGRL3Q9HAR2 1447 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 UQCRHLA0A096LP55 91 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 STX6O43752 255 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 NRDCO43847 1150 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 NEMFO60524 1076 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 UQCRHP07919 91 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 WEE1P30291 646 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 FAM69CQ0P6D2 419 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 KRT32Q14532 448 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 RRS1Q15050 365 aaKnown RBP6.95□□□□□ -1.3
CLDND1-213ENST00000506927 LRRC69Q6ZNQ3 347 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 TXNDC2Q86VQ3 553 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 C16orf71Q8IYS4 520 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-213ENST00000506927 ALDH16A1Q8IZ83 802 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 CLASRPQ8N2M8 674 aaKnown RBP6.95□□□□□ -1.3
CLDND1-213ENST00000506927 MYRIPQ8NFW9 859 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 RHPN1Q8TCX5 695 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 SSH3Q8TE77 659 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 PIBF1Q8WXW3 757 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 ALDH8A1Q9H2A2 487 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-213ENST00000506927 TNRQ92752 1358 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 PLEKHG1Q9ULL1 1385 aa6.95□□□□□ -1.3
CLDND1-213ENST00000506927 RGPD1P0DJD0 1748 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 DCDC2BA2VCK2 349 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 FAM83GA6ND36 823 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 CTAGE5O15320 804 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 ALDH1L1O75891 902 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 DDX58O95786 925 aaKnown RBP6.94□□□□□ -1.3
CLDND1-213ENST00000506927 TUBB4AP04350 444 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 FGFR3P22607 806 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 KRT85P78386 507 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 OS9Q13438 667 aaPredicted RBP6.94□□□□□ -1.3
CLDND1-213ENST00000506927 SYCP1Q15431 976 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 SWI5Q1ZZU3 235 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 ZNF385CQ66K41 422 aaPredicted RBP6.94□□□□□ -1.3
CLDND1-213ENST00000506927 ATL3Q6DD88 541 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 MCM10Q7L590 875 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.94□□□□□ -1.3
CLDND1-213ENST00000506927 SMAP1Q8IYB5 467 aaPredicted RBP6.94□□□□□ -1.3
CLDND1-213ENST00000506927 NGDNQ8NEJ9 315 aaKnown RBP6.94□□□□□ -1.3
CLDND1-213ENST00000506927 EVI5LQ96CN4 794 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 NGLY1Q96IV0 654 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 HMG20BQ9P0W2 317 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 TMEM63CQ9P1W3 806 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 HCN2Q9UL51 889 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 GPC6Q9Y625 555 aaPredicted RBP6.94□□□□□ -1.3
CLDND1-213ENST00000506927 ELP1O95163 1332 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 IGSF1Q8N6C5 1336 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 SALL3Q9BXA9 1300 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 USP42Q9H9J4 1324 aaKnown RBP6.94□□□□□ -1.3
CLDND1-213ENST00000506927 DIP2AQ14689 1571 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 TMEM2Q9UHN6 1383 aa6.94□□□□□ -1.3
CLDND1-213ENST00000506927 ANKARQ7Z5J8 1434 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 FMN2Q9NZ56 1722 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 C2CD2LO14523 706 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 KHNYNO15037 678 aaKnown RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 SGSM2O43147 1006 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 SURF6O75683 361 aaKnown RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 IFIT2P09913 472 aaKnown RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 MAPTP10636 758 aaKnown RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 GTF2F1P35269 517 aaKnown RBP eCLIP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms