RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SLAIN2Q9P270 581 aa5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 MYRFQ9Y2G1 1151 aa5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 A6NHS1 94 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 PDGFAP04085 211 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 GSTM4Q03013 218 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 EFEMP1Q12805 493 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 AAMPQ13685 434 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 ERICH6Q7L0X2 663 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 BSNDQ8WZ55 320 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 SALL4Q9UJQ4 1053 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 AP4E1Q9UPM8 1137 aa5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-205ENST00000506779 SRFP11831 508 aa5.35□□□□□ -1.55
TOPBP1-205ENST00000506779 MPSTP25325 297 aa5.35□□□□□ -1.55
TOPBP1-205ENST00000506779 BAHD1Q8TBE0 780 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-205ENST00000506779 PMEPA1Q969W9 287 aa5.35□□□□□ -1.55
TOPBP1-205ENST00000506779 NRSN2Q9GZP1 204 aa5.35□□□□□ -1.55
TOPBP1-205ENST00000506779 C19orf73Q9NVV2 129 aa5.35□□□□□ -1.55
TOPBP1-205ENST00000506779 ADAMTS20P59510 1910 aa5.35□□□□□ -1.55
TOPBP1-205ENST00000506779 OTOL1A6NHN0 477 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 PHACTR2O75167 634 aa5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 ITIH2P19823 946 aa5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 MZF1P28698 734 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 EIF1AXP47813 144 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 TCERG1LQ5VWI1 586 aa5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 ALKBH2Q6NS38 261 aa5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 XKR5Q6UX68 686 aa5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 GTF3C2Q8WUA4 911 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 GGNBP2Q9H3C7 697 aa5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 POLIQ9UNA4 740 aa5.34□□□□□ -1.55
TOPBP1-205ENST00000506779 ESRRAP11474 423 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-205ENST00000506779 GDNFP39905 211 aa5.33□□□□□ -1.56
TOPBP1-205ENST00000506779 TMEM102Q8N9M5 508 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-205ENST00000506779 ASAP3Q8TDY4 903 aa5.33□□□□□ -1.56
TOPBP1-205ENST00000506779 OSMRQ99650 979 aa5.33□□□□□ -1.56
TOPBP1-205ENST00000506779 CHRDQ9H2X0 955 aa5.33□□□□□ -1.56
TOPBP1-205ENST00000506779 C1orf115Q9H7X2 142 aa5.33□□□□□ -1.56
TOPBP1-205ENST00000506779 RAD18Q9NS91 495 aa5.33□□□□□ -1.56
TOPBP1-205ENST00000506779 ARID3CA6NKF2 412 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 LEFTY1O75610 366 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 CTSBP07858 339 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 EDN3P14138 238 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 ZXDAP98168 799 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 MTMR3Q13615 1198 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 SNX29Q8TEQ0 813 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 NXPE3Q969Y0 559 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 ZKSCAN3Q9BRR0 538 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 MTMR7Q9Y216 660 aa5.32□□□□□ -1.56
TOPBP1-205ENST00000506779 EREGO14944 169 aa5.31□□□□□ -1.56
TOPBP1-205ENST00000506779 SASH1O94885 1247 aa5.31□□□□□ -1.56
TOPBP1-205ENST00000506779 EHHADHQ08426 723 aa5.31□□□□□ -1.56
TOPBP1-205ENST00000506779 MENTQ9BUN1 341 aa5.31□□□□□ -1.56
TOPBP1-205ENST00000506779 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-205ENST00000506779 TNFRSF21O75509 655 aa5.3□□□□□ -1.56
TOPBP1-205ENST00000506779 MAOBP27338 520 aa5.3□□□□□ -1.56
TOPBP1-205ENST00000506779 USP5P45974 858 aa5.3□□□□□ -1.56
TOPBP1-205ENST00000506779 SRRDQ9UH36 339 aa5.3□□□□□ -1.56
TOPBP1-205ENST00000506779 FOXD3Q9UJU5 478 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-205ENST00000506779 FAM13AO94988 1023 aa5.29□□□□□ -1.56
TOPBP1-205ENST00000506779 HP1BP3Q5SSJ5 553 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-205ENST00000506779 GPR20Q99678 358 aa5.29□□□□□ -1.56
TOPBP1-205ENST00000506779 DUSP23Q9BVJ7 150 aa5.29□□□□□ -1.56
TOPBP1-205ENST00000506779 AMOTL2Q9Y2J4 779 aa5.29□□□□□ -1.56
TOPBP1-205ENST00000506779 ABL1P00519 1130 aa5.28□□□□□ -1.56
TOPBP1-205ENST00000506779 SSFA2P28290 1259 aa5.28□□□□□ -1.56
TOPBP1-205ENST00000506779 SLC16A11Q8NCK7 471 aa5.28□□□□□ -1.56
TOPBP1-205ENST00000506779 SORCS2Q96PQ0 1159 aa5.28□□□□□ -1.56
TOPBP1-205ENST00000506779 BHLHE41Q9C0J9 482 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-205ENST00000506779 SEMA3GQ9NS98 782 aa5.28□□□□□ -1.56
TOPBP1-205ENST00000506779 CNOT6Q9ULM6 557 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-205ENST00000506779 TMEM88BA6NKF7 163 aa5.27□□□□□ -1.57
TOPBP1-205ENST00000506779 DLG4P78352 724 aa5.27□□□□□ -1.57
TOPBP1-205ENST00000506779 CCDC82Q8N4S0 544 aa5.27□□□□□ -1.57
TOPBP1-205ENST00000506779 CARS2Q9HA77 564 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-205ENST00000506779 LATS2Q9NRM7 1088 aa5.27□□□□□ -1.57
TOPBP1-205ENST00000506779 PPP1R15AO75807 674 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 ZNF211Q13398 564 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 SF3B2Q13435 895 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 POU4F3Q15319 338 aa5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 ZNF385BQ569K4 471 aa5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 TMEM151BQ8IW70 566 aa5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 SPACA3Q8IXA5 215 aa5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 ABHD4Q8TB40 342 aa5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 FEZF2Q8TBJ5 459 aa5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 ANO2Q9NQ90 1003 aa5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 PPP1R9AQ9ULJ8 1098 aa5.26□□□□□ -1.57
TOPBP1-205ENST00000506779 METTL12A8MUP2 240 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 SUPT5HO00267 1087 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 FZD6O60353 706 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 CYP11A1P05108 521 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 POLR3DP05423 398 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 NPR3P17342 541 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 TNFRSF1AP19438 455 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 HMGA2P52926 109 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 FKBP4Q02790 459 aaKnown RBP eCLIP5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 PLP2Q04941 152 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 ZDHHC14Q8IZN3 488 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 GJD3Q8N144 294 aa5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 HEXIM2Q96MH2 286 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-205ENST00000506779 KCTD3Q9Y597 815 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms