RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 ZNF157P51786 506 aaPredicted RBP16.67■□□□□ 0.26
SERF1B-204ENST00000506542 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
SERF1B-204ENST00000506542 SPTY2D1Q68D10 685 aaPredicted RBP16.67■□□□□ 0.26
SERF1B-204ENST00000506542 RGMBQ6NW40 437 aa16.67■□□□□ 0.26
SERF1B-204ENST00000506542 CLMNQ96JQ2 1002 aa16.67■□□□□ 0.26
SERF1B-204ENST00000506542 IL25Q9H293 177 aa16.67■□□□□ 0.26
SERF1B-204ENST00000506542 DDX4Q9NQI0 724 aaKnown RBP16.67■□□□□ 0.26
SERF1B-204ENST00000506542 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
SERF1B-204ENST00000506542 THSD7BQ9C0I4 1608 aa16.67■□□□□ 0.26
SERF1B-204ENST00000506542 IDH1O75874 414 aaKnown RBP16.66■□□□□ 0.26
SERF1B-204ENST00000506542 CHGBP05060 677 aa16.66■□□□□ 0.26
SERF1B-204ENST00000506542 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
SERF1B-204ENST00000506542 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
SERF1B-204ENST00000506542 KBTBD3Q8NAB2 608 aa16.66■□□□□ 0.26
SERF1B-204ENST00000506542 GOLIM4O00461 696 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 EPB41L2O43491 1005 aaKnown RBP16.65■□□□□ 0.26
SERF1B-204ENST00000506542 HSPA1AP0DMV8 641 aaKnown RBP16.65■□□□□ 0.26
SERF1B-204ENST00000506542 HSPA1BP0DMV9 641 aaKnown RBP16.65■□□□□ 0.26
SERF1B-204ENST00000506542 NF2P35240 595 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 PICALMQ13492 652 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 TNFAIP1Q13829 316 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 ANO2Q9NQ90 1003 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 TMOD2Q9NZR1 351 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 RAD50Q92878 1312 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 USP2O75604 605 aaPredicted RBP16.65■□□□□ 0.26
SERF1B-204ENST00000506542 WDHD1O75717 1129 aaPredicted RBP16.65■□□□□ 0.26
SERF1B-204ENST00000506542 RHBDL3P58872 404 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 RASAL3Q86YV0 1011 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 AATFQ9NY61 560 aaKnown RBP eCLIP16.65■□□□□ 0.26
SERF1B-204ENST00000506542 PPP2R3BQ9Y5P8 575 aa16.65■□□□□ 0.26
SERF1B-204ENST00000506542 GPR75-ASB3A0A0A6YYF3 556 aa16.64■□□□□ 0.25
SERF1B-204ENST00000506542 DYNLL1P63167 89 aaKnown RBP16.64■□□□□ 0.25
SERF1B-204ENST00000506542 NAA16Q6N069 864 aaPredicted RBP16.64■□□□□ 0.25
SERF1B-204ENST00000506542 SH3RF3Q8TEJ3 882 aaPredicted RBP16.64■□□□□ 0.25
SERF1B-204ENST00000506542 KIF2CQ99661 725 aa16.64■□□□□ 0.25
SERF1B-204ENST00000506542 TSKSQ9UJT2 592 aa16.64■□□□□ 0.25
SERF1B-204ENST00000506542 ECE1P42892 770 aa16.63■□□□□ 0.25
SERF1B-204ENST00000506542 TNNI2P48788 182 aa16.63■□□□□ 0.25
SERF1B-204ENST00000506542 NMIQ13287 307 aaPredicted RBP16.63■□□□□ 0.25
SERF1B-204ENST00000506542 SH3BP5LQ7L8J4 393 aa16.63■□□□□ 0.25
SERF1B-204ENST00000506542 MAGEB6Q8N7X4 407 aa16.63■□□□□ 0.25
SERF1B-204ENST00000506542 MIGA1Q8NAN2 632 aa16.63■□□□□ 0.25
SERF1B-204ENST00000506542 FAM163AQ96GL9 167 aaPredicted RBP16.63■□□□□ 0.25
SERF1B-204ENST00000506542 HHIPL1Q96JK4 782 aa16.63■□□□□ 0.25
SERF1B-204ENST00000506542 FAM227BQ96M60 508 aa16.63■□□□□ 0.25
SERF1B-204ENST00000506542 SLC10A3P09131 477 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 FKBP1BP68106 108 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 SUPT20HL1Q3ZLR7 823 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 A0A0D9SFI3 127 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 DDTLA6NHG4 134 aaPredicted RBP16.62■□□□□ 0.25
SERF1B-204ENST00000506542 FOXN1O15353 648 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 CYP7A1P22680 504 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 ARMC9Q7Z3E5 817 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 FAM83AQ86UY5 434 aa16.62■□□□□ 0.25
SERF1B-204ENST00000506542 LSG1Q9H089 658 aaKnown RBP16.62■□□□□ 0.25
SERF1B-204ENST00000506542 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
SERF1B-204ENST00000506542 GSTO1P78417 241 aa16.61■□□□□ 0.25
SERF1B-204ENST00000506542 KIF23Q02241 960 aaPredicted RBP16.61■□□□□ 0.25
SERF1B-204ENST00000506542 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
SERF1B-204ENST00000506542 KIAA1211Q6ZU35 1233 aa16.61■□□□□ 0.25
SERF1B-204ENST00000506542 FAM151AQ8WW52 585 aa16.61■□□□□ 0.25
SERF1B-204ENST00000506542 FAM196BA6NMK8 535 aa16.6■□□□□ 0.25
SERF1B-204ENST00000506542 PPP1R12BO60237 982 aaPredicted RBP16.6■□□□□ 0.25
SERF1B-204ENST00000506542 FKBP1CQ5VVH2 108 aa16.6■□□□□ 0.25
SERF1B-204ENST00000506542 SLF2Q8IX21 1173 aa16.6■□□□□ 0.25
SERF1B-204ENST00000506542 ZKSCAN4Q969J2 545 aaPredicted RBP16.6■□□□□ 0.25
SERF1B-204ENST00000506542 ELP3Q9H9T3 547 aa16.6■□□□□ 0.25
SERF1B-204ENST00000506542 WBP1LQ9NX94 342 aa16.6■□□□□ 0.25
SERF1B-204ENST00000506542 SIPA1L1O43166 1804 aa16.6■□□□□ 0.25
SERF1B-204ENST00000506542 LDHCP07864 332 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 MCCP23508 829 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 GJA5P36382 358 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
SERF1B-204ENST00000506542 MAP3K11Q16584 847 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
SERF1B-204ENST00000506542 TEX11Q8IYF3 940 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 IDI2Q9BXS1 227 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 PDE6AP16499 860 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 NOGQ13253 232 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
SERF1B-204ENST00000506542 SLC9C2Q5TAH2 1124 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 MAPKAPK5Q8IW41 473 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
SERF1B-204ENST00000506542 TGFBRAP1Q8WUH2 860 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 CCDC102AQ96A19 550 aa16.59■□□□□ 0.25
SERF1B-204ENST00000506542 CCDC171Q6TFL3 1326 aa16.58■□□□□ 0.25
SERF1B-204ENST00000506542 ATRNL1Q5VV63 1379 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 RNF113AO15541 343 aaKnown RBP16.58■□□□□ 0.24
SERF1B-204ENST00000506542 INPP5BP32019 993 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 HSPA4P34932 840 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 IREB2P48200 963 aaKnown RBP16.58■□□□□ 0.24
SERF1B-204ENST00000506542 VGLL4Q14135 290 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 BECN1Q14457 450 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 IL17RAQ96F46 866 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 WRNIP1Q96S55 665 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 CSRNP1Q96S65 589 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms