RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GSTP1P09211 210 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 CDK11BP21127 795 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 EPHA1P21709 976 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 HNRNPUQ00839 825 aaKnown RBP eCLIP4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 GSTM4Q03013 218 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 CLCQ05315 142 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 FOXD4L6Q3SYB3 417 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 MAP1SQ66K74 1059 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 FOXD4L3Q6VB84 417 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 ZNF662Q6ZS27 426 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 FCHSD1Q86WN1 690 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 ANKRD13AQ8IZ07 590 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 NLGN1Q8N2Q7 840 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 IL22RA1Q8N6P7 574 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 RBBP8NLQ8NC74 664 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 KCNB2Q92953 911 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 DEPDC7Q96QD5 511 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 MDFIQ99750 246 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 CCDC113Q9H0I3 377 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 EHMT1Q9H9B1 1298 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 LRRC4BQ9NT99 713 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 SNTG2Q9NY99 539 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 ACTR10Q9NZ32 417 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 ZNRF3Q9ULT6 936 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 PPME1Q9Y570 386 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 PCDHB14Q9Y5E9 798 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 MRPL42Q9Y6G3 142 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 ATE1O95260 518 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 CYP11A1P05108 521 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 HSD3B2P26439 372 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 PIP4K2BP78356 416 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 PTPN11Q06124 597 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 C19orf57Q0VDD7 668 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 PDZD3Q86UT5 571 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 FAM169BQ8N8A8 192 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 NUDT8Q8WV74 236 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 SLC7A3Q8WY07 619 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 WNT8BQ93098 351 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 GAL3ST3Q96A11 431 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 CORO1BQ9BR76 489 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 GGA1Q9UJY5 639 aa4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 GDF2Q9UK05 429 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRAPPC11-205ENST00000506426 FAM221BA6H8Z2 402 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 CCDC85CA6NKD9 419 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 AMPD1P23109 780 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 CDC25BP30305 580 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 CASP7P55210 303 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 CHMP4BP1P59074 171 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 MLECQ14165 292 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 RASA3Q14644 834 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 TCEAL1Q15170 157 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 PPP2R5EQ16537 467 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 FXNQ16595 210 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 LRRFIP1Q32MZ4 808 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 ZMYM1Q5SVZ6 1142 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 MPRIPQ6WCQ1 1025 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 CELF2-AS1Q8N7Q2 184 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 GOLGA6L1Q8N7Z2 621 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 ACSBG1Q96GR2 724 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 ZC3H12CQ9C0D7 883 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 JPH1Q9HDC5 661 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 OSGEPQ9NPF4 335 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 ST7Q9NRC1 585 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 KRT82Q9NSB4 513 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 PCDHA4Q9UN74 947 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 POLR3KQ9Y2Y1 108 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 MSRB2Q9Y3D2 182 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 SNCAIPQ9Y6H5 919 aa4.67□□□□□ -1.66
TRAPPC11-205ENST00000506426 NACADO15069 1562 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 LINC01387J3KSC0 135 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 ENPP3O14638 875 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 IFRD2Q12894 506 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 POU4F3Q15319 338 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 DDR2Q16832 855 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 HGSNATQ68CP4 663 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 HDXQ7Z353 690 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 LSRQ86X29 649 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 GPBAR1Q8TDU6 330 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 RNPC3Q96LT9 517 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 CACNA2D2Q9NY47 1150 aa4.66□□□□□ -1.66
TRAPPC11-205ENST00000506426 GFRA2O00451 464 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 FSCN2O14926 492 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 PDPK1O15530 556 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 GRIN3BO60391 1043 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 LILRB5O75023 590 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 MAOBP27338 520 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 AFF1P51825 1210 aaKnown RBP4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 GRIK5Q16478 980 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 WIPI1Q5MNZ9 446 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 HP1BP3Q5SSJ5 553 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 LARP1BQ659C4 914 aaKnown RBP4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 TXNDC11Q6PKC3 985 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 C20orf204Q6ZNR8 217 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 SLCO4C1Q6ZQN7 724 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 WFDC8Q8IUA0 241 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 C19orf47Q8N9M1 422 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms