RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SMC5Q8IY18 1101 aa20.22■□□□□ 0.83
SNCA-209ENST00000506244 SLC10A4Q96EP9 437 aa20.22■□□□□ 0.83
SNCA-209ENST00000506244 ZNF341Q9BYN7 854 aa20.22■□□□□ 0.83
SNCA-209ENST00000506244 FZD1Q9UP38 647 aa20.22■□□□□ 0.83
SNCA-209ENST00000506244 CSADQ9Y600 493 aa20.22■□□□□ 0.83
SNCA-209ENST00000506244 ATRNL1Q5VV63 1379 aa20.21■□□□□ 0.83
SNCA-209ENST00000506244 CA12O43570 354 aa20.21■□□□□ 0.83
SNCA-209ENST00000506244 PDE6AP16499 860 aa20.21■□□□□ 0.83
SNCA-209ENST00000506244 MX1P20591 662 aa20.21■□□□□ 0.83
SNCA-209ENST00000506244 IRX6P78412 446 aaPredicted RBP20.21■□□□□ 0.83
SNCA-209ENST00000506244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.21■□□□□ 0.83
SNCA-209ENST00000506244 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
SNCA-209ENST00000506244 OSBPL5Q9H0X9 879 aaPredicted RBP20.21■□□□□ 0.83
SNCA-209ENST00000506244 DDX4Q9NQI0 724 aaKnown RBP20.21■□□□□ 0.83
SNCA-209ENST00000506244 WBP1LQ9NX94 342 aa20.21■□□□□ 0.83
SNCA-209ENST00000506244 FOCADQ5VW36 1801 aa20.2■□□□□ 0.82
SNCA-209ENST00000506244 MYH7P12883 1935 aa20.2■□□□□ 0.82
SNCA-209ENST00000506244 GLRX3O76003 335 aaKnown RBP20.2■□□□□ 0.82
SNCA-209ENST00000506244 ZBTB48P10074 688 aaPredicted RBP20.2■□□□□ 0.82
SNCA-209ENST00000506244 MAP3K9P80192 1104 aa20.2■□□□□ 0.82
SNCA-209ENST00000506244 MIGA1Q8NAN2 632 aa20.2■□□□□ 0.82
SNCA-209ENST00000506244 WRNIP1Q96S55 665 aa20.2■□□□□ 0.82
SNCA-209ENST00000506244 LRRFIP1Q32MZ4 808 aaKnown RBP20.19■□□□□ 0.82
SNCA-209ENST00000506244 EDC3Q96F86 508 aaKnown RBP20.19■□□□□ 0.82
SNCA-209ENST00000506244 DHX36Q9H2U1 1008 aaKnown RBP20.19■□□□□ 0.82
SNCA-209ENST00000506244 PCNTO95613 3336 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 MAGEB6P1A0A0J9YX57 407 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 KIF23Q02241 960 aaPredicted RBP20.18■□□□□ 0.82
SNCA-209ENST00000506244 SREBF2Q12772 1141 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 VGLL4Q14135 290 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 SPRYD7Q5W111 196 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 ZFPM1Q8IX07 1006 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 CLMNQ96JQ2 1002 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 FLT1P17948 1338 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 ZNF532Q9HCE3 1301 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 CDK5RAP2Q96SN8 1893 aa20.18■□□□□ 0.82
SNCA-209ENST00000506244 ADD2P35612 726 aa20.17■□□□□ 0.82
SNCA-209ENST00000506244 TSHZ3Q63HK5 1081 aa20.17■□□□□ 0.82
SNCA-209ENST00000506244 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.17■□□□□ 0.82
SNCA-209ENST00000506244 MIGA2Q7L4E1 593 aa20.17■□□□□ 0.82
SNCA-209ENST00000506244 TGFBRAP1Q8WUH2 860 aa20.17■□□□□ 0.82
SNCA-209ENST00000506244 WNK4Q96J92 1243 aa20.17■□□□□ 0.82
SNCA-209ENST00000506244 LAMB1P07942 1786 aa20.16■□□□□ 0.82
SNCA-209ENST00000506244 DDTLA6NHG4 134 aaPredicted RBP20.16■□□□□ 0.82
SNCA-209ENST00000506244 USP5P45974 858 aa20.16■□□□□ 0.82
SNCA-209ENST00000506244 DYNLL1P63167 89 aaKnown RBP20.16■□□□□ 0.82
SNCA-209ENST00000506244 UBE3CQ15386 1083 aa20.16■□□□□ 0.82
SNCA-209ENST00000506244 SH3BP5LQ7L8J4 393 aa20.16■□□□□ 0.82
SNCA-209ENST00000506244 KBTBD3Q8NAB2 608 aa20.16■□□□□ 0.82
SNCA-209ENST00000506244 PI4K2BQ8TCG2 481 aa20.16■□□□□ 0.82
SNCA-209ENST00000506244 CRNKL1Q9BZJ0 848 aaKnown RBP20.16■□□□□ 0.82
SNCA-209ENST00000506244 ELP3Q9H9T3 547 aa20.16■□□□□ 0.82
SNCA-209ENST00000506244 SALL3Q9BXA9 1300 aa20.16■□□□□ 0.82
SNCA-209ENST00000506244 TCRBV5S4A2TA0A5A2 114 aa20.15■□□□□ 0.82
SNCA-209ENST00000506244 MANSC4A6NHS7 340 aaPredicted RBP20.15■□□□□ 0.82
SNCA-209ENST00000506244 IGHDP01880 384 aa20.15■□□□□ 0.82
SNCA-209ENST00000506244 HLA-DOAP06340 250 aa20.15■□□□□ 0.82
SNCA-209ENST00000506244 ZFYP08048 801 aaPredicted RBP20.15■□□□□ 0.82
SNCA-209ENST00000506244 CTCFP49711 727 aaPredicted RBP20.15■□□□□ 0.82
SNCA-209ENST00000506244 CHD1LQ86WJ1 897 aa20.15■□□□□ 0.82
SNCA-209ENST00000506244 MAPKAPK5Q8IW41 473 aa20.15■□□□□ 0.82
SNCA-209ENST00000506244 OTUD7AQ8TE49 926 aaPredicted RBP20.15■□□□□ 0.82
SNCA-209ENST00000506244 RIOK1Q9BRS2 568 aaKnown RBP20.15■□□□□ 0.82
SNCA-209ENST00000506244 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
SNCA-209ENST00000506244 SAGE1Q9NXZ1 904 aa20.15■□□□□ 0.82
SNCA-209ENST00000506244 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
SNCA-209ENST00000506244 ZNF112Q9UJU3 913 aa20.15■□□□□ 0.82
SNCA-209ENST00000506244 TBC1D12O60347 775 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 MAP3K10Q02779 954 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 NUCB1Q02818 461 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 MKRN3Q13064 507 aaKnown RBP20.14■□□□□ 0.81
SNCA-209ENST00000506244 NOL9Q5SY16 702 aaKnown RBP20.14■□□□□ 0.81
SNCA-209ENST00000506244 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 OPTNQ96CV9 577 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 ZIC5Q96T25 663 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 TRIM34Q9BYJ4 488 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 PI4KBQ9UBF8 816 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 STAP2Q9UGK3 403 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 HERC5Q9UII4 1024 aaKnown RBP20.14■□□□□ 0.81
SNCA-209ENST00000506244 SNCAIPQ9Y6H5 919 aa20.14■□□□□ 0.81
SNCA-209ENST00000506244 NAV1Q8NEY1 1877 aa20.13■□□□□ 0.81
SNCA-209ENST00000506244 SPDYE5A6NIY4 337 aa20.13■□□□□ 0.81
SNCA-209ENST00000506244 FOXN1O15353 648 aa20.13■□□□□ 0.81
SNCA-209ENST00000506244 INHBEP58166 350 aa20.13■□□□□ 0.81
SNCA-209ENST00000506244 ERO1BQ86YB8 467 aa20.13■□□□□ 0.81
SNCA-209ENST00000506244 INPP5BP32019 993 aa20.12■□□□□ 0.81
SNCA-209ENST00000506244 PDE1AP54750 535 aa20.12■□□□□ 0.81
SNCA-209ENST00000506244 ZKSCAN4Q969J2 545 aaPredicted RBP20.12■□□□□ 0.81
SNCA-209ENST00000506244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.12■□□□□ 0.81
SNCA-209ENST00000506244 DDX60LQ5H9U9 1706 aaKnown RBP20.12■□□□□ 0.81
SNCA-209ENST00000506244 MBD4O95243 580 aa20.11■□□□□ 0.81
SNCA-209ENST00000506244 CRACR2BQ8N4Y2 399 aaPredicted RBP20.11■□□□□ 0.81
SNCA-209ENST00000506244 OTUD5Q96G74 571 aa20.11■□□□□ 0.81
SNCA-209ENST00000506244 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
SNCA-209ENST00000506244 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
SNCA-209ENST00000506244 PICK1Q9NRD5 415 aa20.11■□□□□ 0.81
SNCA-209ENST00000506244 MYH1P12882 1939 aa20.11■□□□□ 0.81
SNCA-209ENST00000506244 DOCK1Q14185 1865 aa20.11■□□□□ 0.81
SNCA-209ENST00000506244 CTNND1O60716 968 aaKnown RBP20.1■□□□□ 0.81
SNCA-209ENST00000506244 ALDH1A1P00352 501 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms