RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
PDLIM7-215ENST00000506161 ZGPATQ8N5A5 531 aaKnown RBP20.61■□□□□ 0.89
PDLIM7-215ENST00000506161 IDI2Q9BXS1 227 aa20.61■□□□□ 0.89
PDLIM7-215ENST00000506161 ZNF112Q9UJU3 913 aa20.61■□□□□ 0.89
PDLIM7-215ENST00000506161 GPR75-ASB3A0A0A6YYF3 556 aa20.6■□□□□ 0.89
PDLIM7-215ENST00000506161 CYP2E1P05181 493 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-215ENST00000506161 CRHR2Q13324 411 aa20.6■□□□□ 0.89
PDLIM7-215ENST00000506161 NOM1Q5C9Z4 860 aaKnown RBP20.6■□□□□ 0.89
PDLIM7-215ENST00000506161 ADGRA1Q86SQ6 560 aa20.6■□□□□ 0.89
PDLIM7-215ENST00000506161 FAM43AQ8N2R8 423 aa20.6■□□□□ 0.89
PDLIM7-215ENST00000506161 ZAP70P43403 619 aa20.59■□□□□ 0.89
PDLIM7-215ENST00000506161 PICALMQ13492 652 aa20.59■□□□□ 0.89
PDLIM7-215ENST00000506161 ZNF341Q9BYN7 854 aa20.59■□□□□ 0.89
PDLIM7-215ENST00000506161 PIH1D3Q9NQM4 214 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-215ENST00000506161 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-215ENST00000506161 CSADQ9Y600 493 aa20.59■□□□□ 0.89
PDLIM7-215ENST00000506161 CCL15-CCL14A0A0B4J2E2 113 aa20.58■□□□□ 0.89
PDLIM7-215ENST00000506161 IRF6O14896 467 aa20.58■□□□□ 0.89
PDLIM7-215ENST00000506161 INHBEP58166 350 aa20.58■□□□□ 0.89
PDLIM7-215ENST00000506161 CCL15Q16663 113 aa20.58■□□□□ 0.89
PDLIM7-215ENST00000506161 TTC39AQ5SRH9 613 aa20.58■□□□□ 0.89
PDLIM7-215ENST00000506161 ZBTB40Q9NUA8 1239 aa20.58■□□□□ 0.89
PDLIM7-215ENST00000506161 PHF20L1A8MW92 1017 aa20.57■□□□□ 0.88
PDLIM7-215ENST00000506161 FKTNO75072 461 aa20.57■□□□□ 0.88
PDLIM7-215ENST00000506161 ENTPD3O75355 529 aa20.57■□□□□ 0.88
PDLIM7-215ENST00000506161 UQCRFS1P1P0C7P4 283 aa20.57■□□□□ 0.88
PDLIM7-215ENST00000506161 DCAF15Q66K64 600 aa20.57■□□□□ 0.88
PDLIM7-215ENST00000506161 SPTY2D1Q68D10 685 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-215ENST00000506161 ERO1BQ86YB8 467 aa20.57■□□□□ 0.88
PDLIM7-215ENST00000506161 RAI14Q9P0K7 980 aa20.57■□□□□ 0.88
PDLIM7-215ENST00000506161 FAM196BA6NMK8 535 aa20.56■□□□□ 0.88
PDLIM7-215ENST00000506161 IL1RAPL2Q9NP60 686 aa20.56■□□□□ 0.88
PDLIM7-215ENST00000506161 MYH1P12882 1939 aa20.56■□□□□ 0.88
PDLIM7-215ENST00000506161 ALDH1A1P00352 501 aa20.55■□□□□ 0.88
PDLIM7-215ENST00000506161 MOGSQ13724 837 aa20.55■□□□□ 0.88
PDLIM7-215ENST00000506161 CCDC84Q86UT8 332 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-215ENST00000506161 SH3RF3Q8TEJ3 882 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-215ENST00000506161 ANTXR1Q9H6X2 564 aa20.55■□□□□ 0.88
PDLIM7-215ENST00000506161 BTBD19C9JJ37 291 aa20.54■□□□□ 0.88
PDLIM7-215ENST00000506161 MAP3K10Q02779 954 aa20.54■□□□□ 0.88
PDLIM7-215ENST00000506161 PPIL2Q13356 520 aa20.54■□□□□ 0.88
PDLIM7-215ENST00000506161 RRP1BQ14684 758 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-215ENST00000506161 NOL9Q5SY16 702 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-215ENST00000506161 CD99L2Q8TCZ2 262 aa20.54■□□□□ 0.88
PDLIM7-215ENST00000506161 ZNF512BQ96KM6 892 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-215ENST00000506161 LRP2BPQ9P2M1 347 aa20.54■□□□□ 0.88
PDLIM7-215ENST00000506161 APBB1O00213 710 aa20.53■□□□□ 0.88
PDLIM7-215ENST00000506161 GTF2A2P52657 109 aa20.53■□□□□ 0.88
PDLIM7-215ENST00000506161 CCDC158Q5M9N0 1113 aa20.53■□□□□ 0.88
PDLIM7-215ENST00000506161 AACSQ86V21 672 aa20.53■□□□□ 0.88
PDLIM7-215ENST00000506161 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-215ENST00000506161 RHPN1Q8TCX5 695 aa20.53■□□□□ 0.88
PDLIM7-215ENST00000506161 DDX19BQ9UMR2 479 aa20.53■□□□□ 0.88
PDLIM7-215ENST00000506161 DDX60LQ5H9U9 1706 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-215ENST00000506161 SLF2Q8IX21 1173 aa20.52■□□□□ 0.88
PDLIM7-215ENST00000506161 AATFQ9NY61 560 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM7-215ENST00000506161 COL2A1P02458 1487 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 DYNLL1P63167 89 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 PPATQ06203 517 aa20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 TAF1CQ15572 869 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 OTOP1Q7RTM1 612 aa20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 ZSCAN29Q8IWY8 852 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 HOOK2Q96ED9 719 aa20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 OSBPL5Q9H0X9 879 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 KCNH4Q9UQ05 1017 aa20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 MGAMO43451 1857 aa20.51■□□□□ 0.87
PDLIM7-215ENST00000506161 LDHCP07864 332 aa20.5■□□□□ 0.87
PDLIM7-215ENST00000506161 FXR1P51114 621 aaKnown RBP eCLIP20.5■□□□□ 0.87
PDLIM7-215ENST00000506161 NAA16Q6N069 864 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-215ENST00000506161 MYH7P12883 1935 aa20.5■□□□□ 0.87
PDLIM7-215ENST00000506161 LOC285556D6RIA3 1793 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 POTEFA5A3E0 1075 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 CETPP11597 493 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 MS4A1P11836 297 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 GSTO1P78417 241 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 SNAPC2Q13487 334 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 SHROOM1Q2M3G4 852 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 RPAP2Q8IXW5 612 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 TEX11Q8IYF3 940 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 TRIM17Q9Y577 477 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 HTTP42858 3142 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 NAV1Q8NEY1 1877 aa20.49■□□□□ 0.87
PDLIM7-215ENST00000506161 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 PTPRAP18433 802 aa20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 JAG1P78504 1218 aa20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 GPAT2Q6NUI2 795 aa20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 SCYL3Q8IZE3 742 aa20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 EDC3Q96F86 508 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 ARHGAP39Q9C0H5 1083 aa20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 DNAJC18Q9H819 358 aa20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 ADGRA2Q96PE1 1338 aa20.48■□□□□ 0.87
PDLIM7-215ENST00000506161 CTGFP29279 349 aa20.47■□□□□ 0.87
PDLIM7-215ENST00000506161 PPP4CP60510 307 aa20.47■□□□□ 0.87
PDLIM7-215ENST00000506161 SP3Q02447 781 aa20.47■□□□□ 0.87
PDLIM7-215ENST00000506161 OTUD7BQ6GQQ9 843 aa20.47■□□□□ 0.87
PDLIM7-215ENST00000506161 MAPKAPK5Q8IW41 473 aa20.47■□□□□ 0.87
PDLIM7-215ENST00000506161 ECM2O94769 699 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-215ENST00000506161 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
PDLIM7-215ENST00000506161 ERC1Q8IUD2 1116 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms