RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 MICALL2Q8IY33 904 aa8.6□□□□□ -1.03
NUP54-204ENST00000506098 TEX11Q8IYF3 940 aa8.6□□□□□ -1.03
NUP54-204ENST00000506098 SDR42E1Q8WUS8 393 aa8.6□□□□□ -1.03
NUP54-204ENST00000506098 TBC1D32Q96NH3 1257 aa8.6□□□□□ -1.03
NUP54-204ENST00000506098 UPF2Q9HAU5 1272 aaKnown RBP8.6□□□□□ -1.03
NUP54-204ENST00000506098 DCP1AQ9NPI6 582 aaPredicted RBP8.6□□□□□ -1.03
NUP54-204ENST00000506098 USP40Q9NVE5 1235 aa8.6□□□□□ -1.03
NUP54-204ENST00000506098 CTNNA3Q9UI47 895 aa8.6□□□□□ -1.03
NUP54-204ENST00000506098 PCDHAC2Q9Y5I4 1007 aa8.6□□□□□ -1.03
NUP54-204ENST00000506098 RBM8AQ9Y5S9 174 aaKnown RBP8.6□□□□□ -1.03
NUP54-204ENST00000506098 EPS15P42566 896 aa8.59□□□□□ -1.03
NUP54-204ENST00000506098 RBM5P52756 815 aaKnown RBP eCLIP8.59□□□□□ -1.03
NUP54-204ENST00000506098 ANAPC15P60006 121 aa8.59□□□□□ -1.03
NUP54-204ENST00000506098 SPDYE2Q495Y8 402 aa8.59□□□□□ -1.03
NUP54-204ENST00000506098 TGFBRAP1Q8WUH2 860 aa8.59□□□□□ -1.03
NUP54-204ENST00000506098 C22orf23Q9BZE7 217 aa8.59□□□□□ -1.03
NUP54-204ENST00000506098 NACAP1Q9BZK3 213 aa8.59□□□□□ -1.03
NUP54-204ENST00000506098 TDRD3Q9H7E2 651 aaKnown RBP8.59□□□□□ -1.03
NUP54-204ENST00000506098 ADARB2Q9NS39 739 aaKnown RBP8.59□□□□□ -1.03
NUP54-204ENST00000506098 ZNF70Q9UC06 446 aaPredicted RBP8.59□□□□□ -1.03
NUP54-204ENST00000506098 ANAPC4Q9UJX5 808 aa8.59□□□□□ -1.03
NUP54-204ENST00000506098 FLT1P17948 1338 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 POTECB2RU33 542 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 SLC27A2O14975 620 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 MYO1BO43795 1136 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 ENTPD3O75355 529 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 EGFRP00533 1210 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 APPP05067 770 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 CYP21A2P08686 494 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 MCCP23508 829 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 LMOD1P29536 600 aaPredicted RBP8.58□□□□□ -1.04
NUP54-204ENST00000506098 USP5P45974 858 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 KIF4BQ2VIQ3 1234 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 NBPF9Q3BBW0 867 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 RNF20Q5VTR2 975 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 CREB3L3Q68CJ9 461 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 CTR9Q6PD62 1173 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 FAM83AQ86UY5 434 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 NAPBQ9H115 298 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 DDX4Q9NQI0 724 aaKnown RBP8.58□□□□□ -1.04
NUP54-204ENST00000506098 ARPP21Q9UBL0 812 aaPredicted RBP8.58□□□□□ -1.04
NUP54-204ENST00000506098 FAM198AQ9UFP1 575 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 TAOK2Q9UL54 1235 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 ATRNL1Q5VV63 1379 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 ROBO3Q96MS0 1386 aa8.58□□□□□ -1.04
NUP54-204ENST00000506098 PITPNM2Q9BZ72 1349 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 PARP14Q460N5 1801 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 USP17L12C9JPN9 530 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 USP17L21D6R901 530 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 ZNF213O14771 459 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 FGRP09769 529 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 TDO2P48775 406 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 HIRAP54198 1017 aaPredicted RBP8.57□□□□□ -1.04
NUP54-204ENST00000506098 NFIAQ12857 509 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 IMMTQ16891 758 aaKnown RBP8.57□□□□□ -1.04
NUP54-204ENST00000506098 GLIPR1L2Q4G1C9 344 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 TBC1D10BQ4KMP7 808 aaPredicted RBP8.57□□□□□ -1.04
NUP54-204ENST00000506098 C12orf60Q5U649 245 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 USP50Q70EL3 339 aaPredicted RBP8.57□□□□□ -1.04
NUP54-204ENST00000506098 MAPKAPK5Q8IW41 473 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 IL27Q8NEV9 243 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 FAM151AQ8WW52 585 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 KIF2CQ99661 725 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 TM6SF1Q9BZW5 370 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 NBPF3Q9H094 633 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 OSBPL5Q9H0X9 879 aaPredicted RBP8.57□□□□□ -1.04
NUP54-204ENST00000506098 DHX36Q9H2U1 1008 aaKnown RBP8.57□□□□□ -1.04
NUP54-204ENST00000506098 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 PGAP2Q9UHJ9 254 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 HACL1Q9UJ83 578 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 SNX14Q9Y5W7 946 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 CNTNAP1P78357 1384 aa8.57□□□□□ -1.04
NUP54-204ENST00000506098 IQCA1LA6NCM1 817 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 PCP11498 1178 aaKnown RBP8.56□□□□□ -1.04
NUP54-204ENST00000506098 ZKSCAN1P17029 563 aaPredicted RBP8.56□□□□□ -1.04
NUP54-204ENST00000506098 NT5C2P49902 561 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 PPARAQ07869 468 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 PDE4CQ08493 712 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 KRT32Q14532 448 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 RBM26Q5T8P6 1007 aaKnown RBP8.56□□□□□ -1.04
NUP54-204ENST00000506098 TTC6Q86TZ1 520 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 METTL16Q86W50 562 aaKnown RBP8.56□□□□□ -1.04
NUP54-204ENST00000506098 RASEFQ8IZ41 740 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 ZC3H15Q8WU90 426 aaKnown RBP8.56□□□□□ -1.04
NUP54-204ENST00000506098 STAG1Q8WVM7 1258 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 MCM9Q9NXL9 1143 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 PALD1Q9ULE6 856 aa8.56□□□□□ -1.04
NUP54-204ENST00000506098 BAZ2BQ9UIF8 2168 aaKnown RBP8.56□□□□□ -1.04
NUP54-204ENST00000506098 CLRN2A0PK11 232 aa8.55□□□□□ -1.04
NUP54-204ENST00000506098 E7EWF7 191 aa8.55□□□□□ -1.04
NUP54-204ENST00000506098 EPHX2P34913 555 aa8.55□□□□□ -1.04
NUP54-204ENST00000506098 TNNI2P48788 182 aa8.55□□□□□ -1.04
NUP54-204ENST00000506098 PLCD1P51178 756 aa8.55□□□□□ -1.04
NUP54-204ENST00000506098 CACNB3P54284 484 aa8.55□□□□□ -1.04
NUP54-204ENST00000506098 MAP3K10Q02779 954 aa8.55□□□□□ -1.04
NUP54-204ENST00000506098 GABPAQ06546 454 aa8.55□□□□□ -1.04
NUP54-204ENST00000506098 PICALMQ13492 652 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms