RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 DOC2BQ14184 412 aa9.29□□□□□ -0.92
NIPBL-205ENST00000505998 ZNF394Q53GI3 561 aa9.29□□□□□ -0.92
NIPBL-205ENST00000505998 ZC3H12AQ5D1E8 599 aaKnown RBP9.29□□□□□ -0.92
NIPBL-205ENST00000505998 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-205ENST00000505998 CCDC84Q86UT8 332 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-205ENST00000505998 NT5DC4Q86YG4 428 aa9.29□□□□□ -0.92
NIPBL-205ENST00000505998 ARMC10Q8N2F6 343 aa9.29□□□□□ -0.92
NIPBL-205ENST00000505998 ELMO3Q96BJ8 720 aa9.29□□□□□ -0.92
NIPBL-205ENST00000505998 MYRFLQ96LU7 910 aa9.29□□□□□ -0.92
NIPBL-205ENST00000505998 PCDHGB7Q9Y5F8 929 aa9.29□□□□□ -0.92
NIPBL-205ENST00000505998 DCDC2CA8MYV0 355 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 DHX15O43143 795 aaKnown RBP9.28□□□□□ -0.92
NIPBL-205ENST00000505998 BMP3P12645 472 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 ASPAP45381 313 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-205ENST00000505998 BNC2Q6ZN30 1099 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-205ENST00000505998 HDXQ7Z353 690 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 GOLM1Q8NBJ4 401 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 PICK1Q9NRD5 415 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 HIF3AQ9Y2N7 669 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 CSADQ9Y600 493 aa9.28□□□□□ -0.92
NIPBL-205ENST00000505998 RXRBP28702 533 aa9.27□□□□□ -0.93
NIPBL-205ENST00000505998 ERVK-24P63145 666 aa9.27□□□□□ -0.93
NIPBL-205ENST00000505998 WIPI1Q5MNZ9 446 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-205ENST00000505998 NPM2Q86SE8 214 aaKnown RBP9.27□□□□□ -0.93
NIPBL-205ENST00000505998 C12orf40Q86WS4 652 aa9.27□□□□□ -0.93
NIPBL-205ENST00000505998 YIPF2Q9BWQ6 316 aa9.27□□□□□ -0.93
NIPBL-205ENST00000505998 PIDD1Q9HB75 910 aa9.27□□□□□ -0.93
NIPBL-205ENST00000505998 SUPT16HQ9Y5B9 1047 aaKnown RBP9.27□□□□□ -0.93
NIPBL-205ENST00000505998 SNCAIPQ9Y6H5 919 aa9.27□□□□□ -0.93
NIPBL-205ENST00000505998 BPNT1O95861 308 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 INPP5AQ14642 412 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 SGO2Q562F6 1265 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 FBXL19Q6PCT2 694 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 LRFN4Q6PJG9 635 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 FAM20CQ8IXL6 584 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 ZNF654Q8IZM8 581 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 ZNF296Q8WUU4 475 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-205ENST00000505998 GATAD2BQ8WXI9 593 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 PLPPR2Q96GM1 343 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 KCNF1Q9H3M0 494 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 GSX1Q9H4S2 264 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-205ENST00000505998 DISC1Q9NRI5 854 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 FAM105AQ9NUU6 356 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 ADAMTS1Q9UHI8 967 aa9.26□□□□□ -0.93
NIPBL-205ENST00000505998 DDX41Q9UJV9 622 aaKnown RBP9.26□□□□□ -0.93
NIPBL-205ENST00000505998 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.25□□□□□ -0.93
NIPBL-205ENST00000505998 F13A1P00488 732 aa9.25□□□□□ -0.93
NIPBL-205ENST00000505998 RAB6AP20340 208 aa9.25□□□□□ -0.93
NIPBL-205ENST00000505998 GARTP22102 1010 aa9.25□□□□□ -0.93
NIPBL-205ENST00000505998 RPL6Q02878 288 aaKnown RBP9.25□□□□□ -0.93
NIPBL-205ENST00000505998 PPM1JQ5JR12 505 aa9.25□□□□□ -0.93
NIPBL-205ENST00000505998 CDPF1Q6NVV7 123 aa9.25□□□□□ -0.93
NIPBL-205ENST00000505998 FBLIM1Q8WUP2 373 aa9.25□□□□□ -0.93
NIPBL-205ENST00000505998 SPON2Q9BUD6 331 aa9.25□□□□□ -0.93
NIPBL-205ENST00000505998 FAM221AA4D161 298 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 RNGTTO60942 597 aaKnown RBP9.24□□□□□ -0.93
NIPBL-205ENST00000505998 CILPO75339 1184 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 HCLS1P14317 486 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-205ENST00000505998 MAP4P27816 1152 aaKnown RBP9.24□□□□□ -0.93
NIPBL-205ENST00000505998 ERCC5P28715 1186 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-205ENST00000505998 CDK8P49336 464 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 RACK1P63244 317 aaKnown RBP9.24□□□□□ -0.93
NIPBL-205ENST00000505998 TTLL4Q14679 1199 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 BEND4Q6ZU67 534 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 KIAA0825Q8IV33 1275 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 RNF214Q8ND24 703 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 KCNQ5Q9NR82 932 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-205ENST00000505998 RAXQ9Y2V3 346 aa9.24□□□□□ -0.93
NIPBL-205ENST00000505998 PRAMEF27A3QJZ7 478 aa9.23□□□□□ -0.93
NIPBL-205ENST00000505998 PRR23CQ6ZRP0 262 aa9.23□□□□□ -0.93
NIPBL-205ENST00000505998 FAM196AQ6ZSG2 479 aa9.23□□□□□ -0.93
NIPBL-205ENST00000505998 SSU72Q9NP77 194 aaKnown RBP9.23□□□□□ -0.93
NIPBL-205ENST00000505998 GREM1O60565 184 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 MPP2Q14168 576 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 CYFIP1Q7L576 1253 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 CLEC10AQ8IUN9 316 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 ACSS3Q9H6R3 686 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 IGSF5Q9NSI5 407 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 STOML1Q9UBI4 398 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 ROBO2Q9HCK4 1378 aa9.22□□□□□ -0.93
NIPBL-205ENST00000505998 ZCCHC6Q5VYS8 1495 aaKnown RBP9.21□□□□□ -0.93
NIPBL-205ENST00000505998 MYO15BQ96JP2 1530 aa9.21□□□□□ -0.93
NIPBL-205ENST00000505998 FAM95CA0A1B0GW59 222 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 GFRA2O00451 464 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 FANCGO15287 622 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 TLR3O15455 904 aaKnown RBP9.21□□□□□ -0.94
NIPBL-205ENST00000505998 NFICP08651 508 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 H2AFB1P0C5Y9 115 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 H2AFB2P0C5Z0 115 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 RING1Q06587 406 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 MAP7Q14244 749 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 NFKBIBQ15653 356 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 PAOXQ6QHF9 649 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 SMYD4Q8IYR2 804 aaPredicted RBP9.21□□□□□ -0.94
NIPBL-205ENST00000505998 FBXO27Q8NI29 283 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 EZH1Q92800 747 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms