RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 GGT7Q9UJ14 662 aa9.27□□□□□ -0.93
CHD1-204ENST00000505982 TTF2Q9UNY4 1162 aaKnown RBP9.27□□□□□ -0.93
CHD1-204ENST00000505982 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.27□□□□□ -0.93
CHD1-204ENST00000505982 USP31Q70CQ4 1352 aa9.26□□□□□ -0.93
CHD1-204ENST00000505982 A0A1W2PP55 124 aa9.26□□□□□ -0.93
CHD1-204ENST00000505982 JUNBP17275 347 aaPredicted RBP9.26□□□□□ -0.93
CHD1-204ENST00000505982 ADMP35318 185 aa9.26□□□□□ -0.93
CHD1-204ENST00000505982 DUSP27Q5VZP5 1158 aa9.26□□□□□ -0.93
CHD1-204ENST00000505982 USP48Q86UV5 1035 aa9.26□□□□□ -0.93
CHD1-204ENST00000505982 AGBL5Q8NDL9 886 aa9.26□□□□□ -0.93
CHD1-204ENST00000505982 PCDHGB7Q9Y5F8 929 aa9.26□□□□□ -0.93
CHD1-204ENST00000505982 FCGRTP55899 365 aa9.25□□□□□ -0.93
CHD1-204ENST00000505982 GNL2Q13823 731 aaKnown RBP9.25□□□□□ -0.93
CHD1-204ENST00000505982 ZNF394Q53GI3 561 aa9.25□□□□□ -0.93
CHD1-204ENST00000505982 KIAA0319Q5VV43 1072 aa9.25□□□□□ -0.93
CHD1-204ENST00000505982 NFXL1Q6ZNB6 911 aa9.25□□□□□ -0.93
CHD1-204ENST00000505982 ACBD3Q9H3P7 528 aa9.25□□□□□ -0.93
CHD1-204ENST00000505982 ST13P50502 369 aaKnown RBP9.24□□□□□ -0.93
CHD1-204ENST00000505982 CYP27A1Q02318 531 aa9.24□□□□□ -0.93
CHD1-204ENST00000505982 MAP7Q14244 749 aa9.24□□□□□ -0.93
CHD1-204ENST00000505982 HP1BP3Q5SSJ5 553 aaPredicted RBP9.24□□□□□ -0.93
CHD1-204ENST00000505982 LCE1DQ5T752 114 aa9.24□□□□□ -0.93
CHD1-204ENST00000505982 FLCNQ8NFG4 579 aa9.24□□□□□ -0.93
CHD1-204ENST00000505982 LIN7BQ9HAP6 207 aa9.24□□□□□ -0.93
CHD1-204ENST00000505982 LOC105371045A0A1W2PR82 267 aa9.23□□□□□ -0.93
CHD1-204ENST00000505982 FAM170BA6NMN3 283 aa9.23□□□□□ -0.93
CHD1-204ENST00000505982 ADH5P11766 374 aa9.23□□□□□ -0.93
CHD1-204ENST00000505982 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
CHD1-204ENST00000505982 ZNF654Q8IZM8 581 aa9.23□□□□□ -0.93
CHD1-204ENST00000505982 ZFYVE1Q9HBF4 777 aa9.23□□□□□ -0.93
CHD1-204ENST00000505982 SHROOM4Q9ULL8 1493 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 CYP11A1P05108 521 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 ITGB5P18084 799 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 DTHD1Q6ZMT9 781 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 POU5F2Q8N7G0 328 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 GATA6Q92908 595 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 TINF2Q9BSI4 451 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 TANGO6Q9C0B7 1094 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 DDX41Q9UJV9 622 aaKnown RBP9.22□□□□□ -0.93
CHD1-204ENST00000505982 AKAP2Q9Y2D5 859 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 INPP5FQ9Y2H2 1132 aa9.22□□□□□ -0.93
CHD1-204ENST00000505982 NFICP08651 508 aa9.21□□□□□ -0.94
CHD1-204ENST00000505982 TNNI2P48788 182 aa9.21□□□□□ -0.94
CHD1-204ENST00000505982 JAG1P78504 1218 aa9.21□□□□□ -0.94
CHD1-204ENST00000505982 PTPN12Q05209 780 aaKnown RBP9.21□□□□□ -0.94
CHD1-204ENST00000505982 GLIS3Q8NEA6 775 aa9.21□□□□□ -0.94
CHD1-204ENST00000505982 NRSN2Q9GZP1 204 aa9.21□□□□□ -0.94
CHD1-204ENST00000505982 ACTL7BQ9Y614 415 aa9.21□□□□□ -0.94
CHD1-204ENST00000505982 CCDC85BQ15834 202 aaPredicted RBP9.2□□□□□ -0.94
CHD1-204ENST00000505982 PRPF40BQ6NWY9 871 aaKnown RBP9.2□□□□□ -0.94
CHD1-204ENST00000505982 UBXN4Q92575 508 aa9.2□□□□□ -0.94
CHD1-204ENST00000505982 LRRC4CQ9HCJ2 640 aa9.2□□□□□ -0.94
CHD1-204ENST00000505982 PAK6Q9NQU5 681 aaPredicted RBP9.2□□□□□ -0.94
CHD1-204ENST00000505982 ZC3H7BQ9UGR2 993 aaKnown RBP9.2□□□□□ -0.94
CHD1-204ENST00000505982 A0A096LPE4 126 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.19□□□□□ -0.94
CHD1-204ENST00000505982 TMEM238LA0A1B0GVL6 79 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 A0A1W2PPZ6 126 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 METTL12A8MUP2 240 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 C8AP07357 584 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 XRCC5P13010 732 aaKnown RBP9.19□□□□□ -0.94
CHD1-204ENST00000505982 RAB6AP20340 208 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 MAOBP27338 520 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 RACK1P63244 317 aaKnown RBP9.19□□□□□ -0.94
CHD1-204ENST00000505982 PCDH1Q08174 1060 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 DYMQ7RTS9 669 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 CLEC4MQ9H2X3 399 aaPredicted RBP9.19□□□□□ -0.94
CHD1-204ENST00000505982 ABCB6Q9NP58 842 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
CHD1-204ENST00000505982 DNAJA1P31689 397 aaKnown RBP9.18□□□□□ -0.94
CHD1-204ENST00000505982 POU4F3Q15319 338 aa9.18□□□□□ -0.94
CHD1-204ENST00000505982 ZNF765Q7L2R6 523 aa9.18□□□□□ -0.94
CHD1-204ENST00000505982 C3orf58Q8NDZ4 430 aa9.18□□□□□ -0.94
CHD1-204ENST00000505982 SEMA6CQ9H3T2 930 aa9.18□□□□□ -0.94
CHD1-204ENST00000505982 FBXO24O75426 580 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 ZNF423Q2M1K9 1284 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 AKAP4Q5JQC9 854 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 CCNJLQ8IV13 435 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 SLC43A3Q8NBI5 491 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 DDX54Q8TDD1 881 aaKnown RBP9.17□□□□□ -0.94
CHD1-204ENST00000505982 TCF12Q99081 682 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 NOC4LQ9BVI4 516 aaKnown RBP9.17□□□□□ -0.94
CHD1-204ENST00000505982 KRTAP4-7Q9BYR0 210 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 ACSS3Q9H6R3 686 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 COPRSQ9NQ92 184 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 PPM1HQ9ULR3 514 aa9.17□□□□□ -0.94
CHD1-204ENST00000505982 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
CHD1-204ENST00000505982 RELL1Q8IUW5 271 aa9.16□□□□□ -0.94
CHD1-204ENST00000505982 KBTBD4Q9NVX7 518 aa9.16□□□□□ -0.94
CHD1-204ENST00000505982 SLC5A6Q9Y289 635 aa9.16□□□□□ -0.94
CHD1-204ENST00000505982 F6X3S4 739 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 ATP2B1P20020 1258 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 ASPAP45381 313 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 PWP1Q13610 501 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 MAP3K11Q16584 847 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 ERMP1Q7Z2K6 904 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 VPS37DQ86XT2 251 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 CORO1BQ9BR76 489 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 FAM105AQ9NUU6 356 aa9.15□□□□□ -0.94
CHD1-204ENST00000505982 AP4E1Q9UPM8 1137 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms