RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SPON2Q9BUD6 331 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 CEP41Q9BYV8 373 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 TGIF2Q9GZN2 237 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 ACBD3Q9H3P7 528 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 PCDHGC5Q9Y5F6 944 aa6.62□□□□□ -1.35
TOPBP1-204ENST00000505804 SYNGAP1Q96PV0 1343 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 FAM221AA4D161 298 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 TMPRSS2O15393 492 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 GREM1O60565 184 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 ID3Q02535 119 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 C2CD4AQ8NCU7 369 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 FBXO27Q8NI29 283 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 GATAD2BQ8WXI9 593 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 PLPPR2Q96GM1 343 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 KCNQ5Q9NR82 932 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 CRIM1Q9NZV1 1036 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 AP4E1Q9UPM8 1137 aa6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 SUPT16HQ9Y5B9 1047 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-204ENST00000505804 TLR3O15455 904 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 CILPO75339 1184 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 ASPAP45381 313 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 LRFN4Q6PJG9 635 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 FAM196AQ6ZSG2 479 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 HDXQ7Z353 690 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 KIAA0825Q8IV33 1275 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 ELMO3Q96BJ8 720 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 FAM46AQ96IP4 442 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 EAF1Q96JC9 268 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 FANCD2OSQ96PS1 177 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 DISC1Q9NRI5 854 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 UBP1Q9NZI7 540 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 ACTL7BQ9Y614 415 aa6.6□□□□□ -1.35
TOPBP1-204ENST00000505804 GFRA2O00451 464 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 GAS2O43903 313 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 TNNI2P48788 182 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 USP11P51784 963 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 PAK2Q13177 524 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 PPM1JQ5JR12 505 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 WIPI1Q5MNZ9 446 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 ARMC10Q8N2F6 343 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 SSBP4Q9BWG4 385 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 CCSER2Q9H7U1 834 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 FAM105AQ9NUU6 356 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 HIF3AQ9Y2N7 669 aa6.59□□□□□ -1.35
TOPBP1-204ENST00000505804 BPNT1O95861 308 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 BMP3P12645 472 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 CRKP46108 304 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 ERVK-24P63145 666 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 RPL6Q02878 288 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 RING1Q06587 406 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 TTLL4Q14679 1199 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 DIEXFQ68CQ4 756 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 CDPF1Q6NVV7 123 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 CYFIP1Q7L576 1253 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 TP53INP1Q96A56 240 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 NT5C1AQ9BXI3 368 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 ATXN3LQ9H3M9 355 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 GSX1Q9H4S2 264 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 PICK1Q9NRD5 415 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 SNCAIPQ9Y6H5 919 aa6.58□□□□□ -1.36
TOPBP1-204ENST00000505804 ROBO2Q9HCK4 1378 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 PRAMEF27A3QJZ7 478 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 RNGTTO60942 597 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 HCLS1P14317 486 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 APOBRQ0VD83 1088 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 MPP2Q14168 576 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 SEZ6Q53EL9 994 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 SGO2Q562F6 1265 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 FBLIM1Q8WUP2 373 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 UTP4Q969X6 686 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 MYRFLQ96LU7 910 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 TPSG1Q9NRR2 321 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 INPP5FQ9Y2H2 1132 aa6.57□□□□□ -1.36
TOPBP1-204ENST00000505804 GRIN3BO60391 1043 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 RAB6AP20340 208 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 DOC2BQ14184 412 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 UVSSAQ2YD98 709 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 GPAT2Q6NUI2 795 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 REC114Q7Z4M0 266 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 RNF214Q8ND24 703 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 NKD1Q969G9 470 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 KCNF1Q9H3M0 494 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 PIDD1Q9HB75 910 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 CAPN10Q9HC96 672 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 BRMS1Q9HCU9 246 aa6.56□□□□□ -1.36
TOPBP1-204ENST00000505804 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 FANCGO15287 622 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 NEFMP07197 916 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 NFICP08651 508 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 RXRBP28702 533 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 CWF19L2Q2TBE0 894 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 SLITRK4Q8IW52 837 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 FAM20CQ8IXL6 584 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 SPOCK3Q9BQ16 436 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 LGR6Q9HBX8 967 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 SSU72Q9NP77 194 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms