RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 ZFPM1Q8IX07 1006 aa13.89□□□□□ -0.19
KDM3B-203ENST00000505756 WRNIP1Q96S55 665 aa13.89□□□□□ -0.19
KDM3B-203ENST00000505756 ZNF341Q9BYN7 854 aa13.89□□□□□ -0.19
KDM3B-203ENST00000505756 ANTXR1Q9H6X2 564 aa13.89□□□□□ -0.19
KDM3B-203ENST00000505756 ELP3Q9H9T3 547 aa13.89□□□□□ -0.19
KDM3B-203ENST00000505756 DDX4Q9NQI0 724 aaKnown RBP13.89□□□□□ -0.19
KDM3B-203ENST00000505756 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
KDM3B-203ENST00000505756 NDUFB9Q9Y6M9 179 aa13.89□□□□□ -0.19
KDM3B-203ENST00000505756 MANSC4A6NHS7 340 aaPredicted RBP13.88□□□□□ -0.19
KDM3B-203ENST00000505756 ATP5JP18859 108 aa13.88□□□□□ -0.19
KDM3B-203ENST00000505756 INHBEP58166 350 aa13.88□□□□□ -0.19
KDM3B-203ENST00000505756 PPP4CP60510 307 aa13.88□□□□□ -0.19
KDM3B-203ENST00000505756 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
KDM3B-203ENST00000505756 MIGA2Q7L4E1 593 aa13.88□□□□□ -0.19
KDM3B-203ENST00000505756 ADGRA1Q86SQ6 560 aa13.88□□□□□ -0.19
KDM3B-203ENST00000505756 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
KDM3B-203ENST00000505756 OPTNQ96CV9 577 aa13.88□□□□□ -0.19
KDM3B-203ENST00000505756 RNF186Q9NXI6 227 aa13.88□□□□□ -0.19
KDM3B-203ENST00000505756 AATFQ9NY61 560 aaKnown RBP eCLIP13.88□□□□□ -0.19
KDM3B-203ENST00000505756 TSKSQ9UJT2 592 aa13.88□□□□□ -0.19
KDM3B-203ENST00000505756 COL2A1P02458 1487 aaPredicted RBP13.87□□□□□ -0.19
KDM3B-203ENST00000505756 ATRNL1Q5VV63 1379 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 SMARCA5O60264 1052 aaPredicted RBP13.87□□□□□ -0.19
KDM3B-203ENST00000505756 TRPA1O75762 1119 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 CYP7A1P22680 504 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 CERS3Q8IU89 383 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 MAGEB6Q8N7X4 407 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 SH3RF3Q8TEJ3 882 aaPredicted RBP13.87□□□□□ -0.19
KDM3B-203ENST00000505756 CCDC136Q96JN2 1154 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 DNAJC2Q99543 621 aaKnown RBP13.87□□□□□ -0.19
KDM3B-203ENST00000505756 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
KDM3B-203ENST00000505756 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
KDM3B-203ENST00000505756 LAMB1P07942 1786 aa13.86□□□□□ -0.19
KDM3B-203ENST00000505756 DDTLA6NHG4 134 aaPredicted RBP13.86□□□□□ -0.19
KDM3B-203ENST00000505756 SPDYE5A6NIY4 337 aa13.86□□□□□ -0.19
KDM3B-203ENST00000505756 GOLIM4O00461 696 aa13.86□□□□□ -0.19
KDM3B-203ENST00000505756 GJA5P36382 358 aa13.86□□□□□ -0.19
KDM3B-203ENST00000505756 ZKSCAN4Q969J2 545 aaPredicted RBP13.86□□□□□ -0.19
KDM3B-203ENST00000505756 BOLA2Q9H3K6 86 aa13.86□□□□□ -0.19
KDM3B-203ENST00000505756 SNCAIPQ9Y6H5 919 aa13.86□□□□□ -0.19
KDM3B-203ENST00000505756 MYO5AQ9Y4I1 1855 aaKnown RBP13.86□□□□□ -0.19
KDM3B-203ENST00000505756 ALDH1A1P00352 501 aa13.85□□□□□ -0.19
KDM3B-203ENST00000505756 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
KDM3B-203ENST00000505756 CENPQQ7L2Z9 268 aaPredicted RBP13.85□□□□□ -0.19
KDM3B-203ENST00000505756 GPATCH3Q96I76 525 aa13.85□□□□□ -0.19
KDM3B-203ENST00000505756 HAUS7Q99871 368 aa13.85□□□□□ -0.19
KDM3B-203ENST00000505756 ECHDC1Q9NTX5 307 aa13.85□□□□□ -0.19
KDM3B-203ENST00000505756 PAG1Q9NWQ8 432 aa13.85□□□□□ -0.19
KDM3B-203ENST00000505756 AK9Q5TCS8 1911 aa13.84□□□□□ -0.19
KDM3B-203ENST00000505756 TESPA1A2RU30 521 aaPredicted RBP13.84□□□□□ -0.19
KDM3B-203ENST00000505756 INPP5BP32019 993 aa13.84□□□□□ -0.19
KDM3B-203ENST00000505756 NOL9Q5SY16 702 aaKnown RBP13.84□□□□□ -0.19
KDM3B-203ENST00000505756 SLC9C2Q5TAH2 1124 aa13.84□□□□□ -0.19
KDM3B-203ENST00000505756 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
KDM3B-203ENST00000505756 ERO1BQ86YB8 467 aa13.84□□□□□ -0.19
KDM3B-203ENST00000505756 IFNL1Q8IU54 200 aa13.84□□□□□ -0.19
KDM3B-203ENST00000505756 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
KDM3B-203ENST00000505756 OTUD5Q96G74 571 aa13.84□□□□□ -0.19
KDM3B-203ENST00000505756 DHX36Q9H2U1 1008 aaKnown RBP13.84□□□□□ -0.19
KDM3B-203ENST00000505756 PHF20L1A8MW92 1017 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 TBC1D12O60347 775 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 PDE6AP16499 860 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 GTF2A2P52657 109 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 DYNLL1P63167 89 aaKnown RBP13.83□□□□□ -0.2
KDM3B-203ENST00000505756 PPATQ06203 517 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 PPIL2Q13356 520 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 OTUD7BQ6GQQ9 843 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 TNS4Q8IZW8 715 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 MIGA1Q8NAN2 632 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 TGFBRAP1Q8WUH2 860 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 GCC1Q96CN9 775 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 CFHR5Q9BXR6 569 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 FLT1P17948 1338 aa13.83□□□□□ -0.2
KDM3B-203ENST00000505756 IGF2BP3O00425 579 aaKnown RBP eCLIP13.82□□□□□ -0.2
KDM3B-203ENST00000505756 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
KDM3B-203ENST00000505756 SCYL3Q8IZE3 742 aa13.82□□□□□ -0.2
KDM3B-203ENST00000505756 EDC3Q96F86 508 aaKnown RBP13.82□□□□□ -0.2
KDM3B-203ENST00000505756 MS4A4AQ96JQ5 239 aa13.82□□□□□ -0.2
KDM3B-203ENST00000505756 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.82□□□□□ -0.26e-6■■■□□ 19.2
KDM3B-203ENST00000505756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
KDM3B-203ENST00000505756 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
KDM3B-203ENST00000505756 HERC5Q9UII4 1024 aaKnown RBP13.82□□□□□ -0.2
KDM3B-203ENST00000505756 FOCADQ5VW36 1801 aa13.82□□□□□ -0.2
KDM3B-203ENST00000505756 ZNF532Q9HCE3 1301 aa13.82□□□□□ -0.2
KDM3B-203ENST00000505756 MAGEB6P1A0A0J9YX57 407 aa13.81□□□□□ -0.2
KDM3B-203ENST00000505756 TCRBV5S4A2TA0A5A2 114 aa13.81□□□□□ -0.2
KDM3B-203ENST00000505756 IRF6O14896 467 aa13.81□□□□□ -0.2
KDM3B-203ENST00000505756 CTNND1O60716 968 aaKnown RBP13.81□□□□□ -0.2
KDM3B-203ENST00000505756 TBC1D8O95759 1140 aa13.81□□□□□ -0.2
KDM3B-203ENST00000505756 SNAPC2Q13487 334 aa13.81□□□□□ -0.2
KDM3B-203ENST00000505756 NOM1Q5C9Z4 860 aaKnown RBP13.81□□□□□ -0.2
KDM3B-203ENST00000505756 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
KDM3B-203ENST00000505756 RIOK1Q9BRS2 568 aaKnown RBP13.81□□□□□ -0.2
KDM3B-203ENST00000505756 RWDD1Q9H446 243 aaPredicted RBP13.81□□□□□ -0.2
KDM3B-203ENST00000505756 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
KDM3B-203ENST00000505756 TTC41PQ6P2S7 1318 aa13.81□□□□□ -0.2
KDM3B-203ENST00000505756 CCL15-CCL14A0A0B4J2E2 113 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms