RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ZNF384Q8TF68 577 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 CNKSR1Q969H4 720 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 ZNF622Q969S3 477 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL4A5-208ENST00000505728 EYA3Q99504 573 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 SUGT1Q9Y2Z0 365 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 DUOX1Q9NRD9 1551 aa9.46□□□□□ -0.89
COL4A5-208ENST00000505728 SH2B2O14492 632 aaPredicted RBP9.46□□□□□ -0.9
COL4A5-208ENST00000505728 DHX16O60231 1041 aaKnown RBP9.46□□□□□ -0.9
COL4A5-208ENST00000505728 F13A1P00488 732 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 HTRA3P83110 453 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 CTDSPL2Q05D32 466 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 GSE1Q14687 1217 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 SBK1Q52WX2 424 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 CC2D2BQ6DHV5 1058 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 MCTP1Q6DN14 999 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 CYB5R4Q7L1T6 521 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 CHST3Q7LGC8 479 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 TMTC2Q8N394 836 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 RGS22Q8NE09 1264 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
COL4A5-208ENST00000505728 IGDCC4Q8TDY8 1250 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.9
COL4A5-208ENST00000505728 NOL10Q9BSC4 688 aaKnown RBP9.46□□□□□ -0.9
COL4A5-208ENST00000505728 ZC3H12CQ9C0D7 883 aaKnown RBP9.46□□□□□ -0.9
COL4A5-208ENST00000505728 RRAGCQ9HB90 399 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 RNF216Q9NWF9 866 aaPredicted RBP9.46□□□□□ -0.9
COL4A5-208ENST00000505728 ANGEL1Q9UNK9 670 aaKnown RBP9.46□□□□□ -0.9
COL4A5-208ENST00000505728 MTMR6Q9Y217 621 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 SLX4Q8IY92 1834 aa9.46□□□□□ -0.9
COL4A5-208ENST00000505728 MAST2Q6P0Q8 1798 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 MYH2Q9UKX2 1941 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 B4E1Z4 1266 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 SLC3A2P08195 630 aaKnown RBP9.45□□□□□ -0.9
COL4A5-208ENST00000505728 FGRP09769 529 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 LIFRP42702 1097 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 SART3Q15020 963 aaKnown RBP9.45□□□□□ -0.9
COL4A5-208ENST00000505728 GRIPAP1Q4V328 841 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 DPP8Q6V1X1 898 aaPredicted RBP9.45□□□□□ -0.9
COL4A5-208ENST00000505728 SGMS1Q86VZ5 419 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 FAM184AQ8NB25 1140 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 NSUN7Q8NE18 718 aaKnown RBP9.45□□□□□ -0.9
COL4A5-208ENST00000505728 SDR42E1Q8WUS8 393 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 GPR101Q96P66 508 aaPredicted RBP9.45□□□□□ -0.9
COL4A5-208ENST00000505728 LMBRD1Q9NUN5 540 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 AATFQ9NY61 560 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL4A5-208ENST00000505728 ZSWIM5Q9P217 1185 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 LTBP1Q14766 1721 aa9.45□□□□□ -0.9
COL4A5-208ENST00000505728 BAZ2AQ9UIF9 1905 aaKnown RBP9.44□□□□□ -0.9
COL4A5-208ENST00000505728 GPR75-ASB3A0A0A6YYF3 556 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 KLF18A0A0U1RQI7 1052 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 MINDY4BA8MYZ0 360 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 IFIT3O14879 490 aaKnown RBP9.44□□□□□ -0.9
COL4A5-208ENST00000505728 KDM4AO75164 1064 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 CTDNEP1O95476 244 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 PLCG2P16885 1265 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 KLHL40Q2TBA0 621 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 TMEM67Q5HYA8 995 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 FOXD4L5Q5VV16 416 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-208ENST00000505728 CTR9Q6PD62 1173 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 SLC51AQ86UW1 340 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 FOXD4L4Q8WXT5 416 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-208ENST00000505728 ESR2Q92731 530 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 DCP1AQ9NPI6 582 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-208ENST00000505728 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-208ENST00000505728 ARPP21Q9UBL0 812 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-208ENST00000505728 BRPF3Q9ULD4 1205 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 NAP1L2Q9ULW6 460 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-208ENST00000505728 JAG2Q9Y219 1238 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 TACC3Q9Y6A5 838 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 NEDD4P46934 1319 aa9.44□□□□□ -0.9
COL4A5-208ENST00000505728 MROH7-TTC4A0A0A0MT08 1334 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 ERICH2A1L162 156 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 PTPDC1A2A3K4 754 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 VPS37CA5D8V6 355 aaPredicted RBP9.43□□□□□ -0.9
COL4A5-208ENST00000505728 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 USP17L21D6R901 530 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 G3V3G9 751 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 NFKBIEO00221 500 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 RIMBP2O15034 1052 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 ORC4O43929 436 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 JAK2O60674 1132 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 PRPF40AO75400 957 aaKnown RBP9.43□□□□□ -0.9
COL4A5-208ENST00000505728 USP5P45974 858 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 RCAN1P53805 252 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 FKBP1AP62942 108 aaKnown RBP9.43□□□□□ -0.9
COL4A5-208ENST00000505728 CCT2P78371 535 aaKnown RBP9.43□□□□□ -0.9
COL4A5-208ENST00000505728 FSTL1Q12841 308 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 MFSD14BQ5SR56 506 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 CPLX2Q6PUV4 134 aaKnown RBP9.43□□□□□ -0.9
COL4A5-208ENST00000505728 SYNE3Q6ZMZ3 975 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 TTLL6Q8N841 843 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 TMEM87AQ8NBN3 555 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 SUPT20HQ8NEM7 779 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 RTFDC1Q9BY42 306 aaPredicted RBP9.43□□□□□ -0.9
COL4A5-208ENST00000505728 LY9Q9HBG7 655 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 INCENPQ9NQS7 918 aa9.43□□□□□ -0.9
COL4A5-208ENST00000505728 TOMM22Q9NS69 142 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms