RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 TUBB2BQ9BVA1 445 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 HMG20BQ9P0W2 317 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 PA2G4Q9UQ80 394 aaKnown RBP15.14■□□□□ 0.01
LETM1-203ENST00000505551 FAM169AQ9Y6X4 670 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 TRPM3Q9HCF6 1732 aaPredicted RBP15.14■□□□□ 0.01
LETM1-203ENST00000505551 LRRC37A3O60309 1634 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 SYF2O95926 243 aaKnown RBP15.14■□□□□ 0.01
LETM1-203ENST00000505551 MTA1Q13330 715 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 PRPF38AQ8NAV1 312 aaKnown RBP15.14■□□□□ 0.01
LETM1-203ENST00000505551 FAM227BQ96M60 508 aa15.14■□□□□ 0.01
LETM1-203ENST00000505551 LLPHQ9BRT6 129 aaKnown RBP15.14■□□□□ 0.01
LETM1-203ENST00000505551 GNL3LQ9NVN8 582 aaKnown RBP15.14■□□□□ 0.01
LETM1-203ENST00000505551 PUF60Q9UHX1 559 aaKnown RBP15.14■□□□□ 0.01
LETM1-203ENST00000505551 A0A1B0GVL5 298 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 TMEM232C9JQI7 657 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 HIP1O00291 1037 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
LETM1-203ENST00000505551 NMIQ13287 307 aaPredicted RBP15.13■□□□□ 0.01
LETM1-203ENST00000505551 CFAP100Q494V2 611 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 ISM2Q6H9L7 571 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 RIC3Q7Z5B4 369 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 EXOC8Q8IYI6 725 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 ECHDC1Q9NTX5 307 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 TNS3Q68CZ2 1445 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 BIN1O00499 593 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 MYO1BO43795 1136 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 CABP4P57796 275 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 DDR1Q08345 913 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 BIRC2Q13490 618 aa15.13■□□□□ 0.01
LETM1-203ENST00000505551 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
LETM1-203ENST00000505551 MED23Q9ULK4 1368 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 SERPINC1P01008 464 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 GPTP24298 496 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 EVA1CP58658 441 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 ZC3H12AQ5D1E8 599 aaKnown RBP15.12■□□□□ 0.01
LETM1-203ENST00000505551 COPS6Q7L5N1 327 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 ILDR1Q86SU0 546 aaPredicted RBP15.12■□□□□ 0.01
LETM1-203ENST00000505551 TTC5Q8N0Z6 440 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 CDHR2Q9BYE9 1310 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 CCT2P78371 535 aaKnown RBP15.12■□□□□ 0.01
LETM1-203ENST00000505551 PDIA6Q15084 440 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 LRCH2Q5VUJ6 765 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 KSR2Q6VAB6 950 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 GBP6Q6ZN66 633 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 ANKRD23Q86SG2 305 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 XAGE3Q8WTP9 111 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 MRPL44Q9H9J2 332 aaKnown RBP15.12■□□□□ 0.01
LETM1-203ENST00000505551 INTS13Q9NVM9 706 aa15.12■□□□□ 0.01
LETM1-203ENST00000505551 EBAG9O00559 213 aa15.11■□□□□ 0.01
LETM1-203ENST00000505551 KDM6AO15550 1401 aaPredicted RBP15.11■□□□□ 0.01
LETM1-203ENST00000505551 PTCD1O75127 700 aaKnown RBP15.11■□□□□ 0.01
LETM1-203ENST00000505551 HOXB7P09629 217 aa15.11■□□□□ 0.01
LETM1-203ENST00000505551 MYL5Q02045 173 aa15.11■□□□□ 0.01
LETM1-203ENST00000505551 KARSQ15046 597 aaKnown RBP15.11■□□□□ 0.01
LETM1-203ENST00000505551 TC2NQ8N9U0 490 aa15.11■□□□□ 0.01
LETM1-203ENST00000505551 RTEL1Q9NZ71 1219 aa15.11■□□□□ 0.01
LETM1-203ENST00000505551 CCT5P48643 541 aa15.11■□□□□ 0.01
LETM1-203ENST00000505551 MAP9Q49MG5 647 aa15.11■□□□□ 0.01
LETM1-203ENST00000505551 CPLX2Q6PUV4 134 aaKnown RBP15.11■□□□□ 0.01
LETM1-203ENST00000505551 NSUN7Q8NE18 718 aaKnown RBP15.11■□□□□ 0.01
LETM1-203ENST00000505551 ITFG2Q969R8 447 aa15.11■□□□□ 0.01
LETM1-203ENST00000505551 BSDC1Q9NW68 430 aaPredicted RBP15.11■□□□□ 0.01
LETM1-203ENST00000505551 SCRN1Q12765 414 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 WDR93Q6P2C0 686 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 KLHDC4Q8TBB5 520 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 ZC3H4Q9UPT8 1303 aaKnown RBP15.1■□□□□ 0.01
LETM1-203ENST00000505551 SCP2P22307 547 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 TBC1D22AQ8WUA7 517 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 MIEF2Q96C03 454 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 CABS1Q96KC9 395 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 IRX2Q9BZI1 471 aaPredicted RBP15.1■□□□□ 0.01
LETM1-203ENST00000505551 SIL1Q9H173 461 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 MCM8Q9UJA3 840 aa15.1■□□□□ 0.01
LETM1-203ENST00000505551 ATXN2Q99700 1313 aaKnown RBP15.1■□□□□ 0.01
LETM1-203ENST00000505551 ATP5J2-PTCD1G3V325 749 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 RHOXF2BP0C7M4 288 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 INPP5BP32019 993 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
LETM1-203ENST00000505551 MTX1Q13505 466 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 KRT32Q14532 448 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 IGSF22Q8N9C0 903 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 ATL2Q8NHH9 583 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 GIMAP7Q8NHV1 300 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 ARHGEF1Q92888 912 aaKnown RBP15.09■□□□□ 0.01
LETM1-203ENST00000505551 GPATCH3Q96I76 525 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 RHOXF2Q9BQY4 288 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 PFKFB2O60825 505 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 ELF1P32519 619 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 NEDD9Q14511 834 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 XAGE2Q96GT9 111 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 MYD88Q99836 296 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 JPH2Q9BR39 696 aaPredicted RBP15.09■□□□□ 0.01
LETM1-203ENST00000505551 DESI2Q9BSY9 194 aa15.09■□□□□ 0.01
LETM1-203ENST00000505551 DDX21Q9NR30 783 aaKnown RBP eCLIP15.09■□□□□ 0.01
LETM1-203ENST00000505551 ZNF330Q9Y3S2 320 aaPredicted RBP15.09■□□□□ 0.01
LETM1-203ENST00000505551 KIF3CO14782 793 aa15.08■□□□□ 0.01
LETM1-203ENST00000505551 C11orf91Q3C1V1 193 aa15.08■□□□□ 0.01
LETM1-203ENST00000505551 CLASRPQ8N2M8 674 aaKnown RBP15.08■□□□□ 0.01
LETM1-203ENST00000505551 LINC00301Q8NCQ3 95 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms