RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 DYNC1I1O14576 645 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 FYB1O15117 783 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 MAP3K6O95382 1288 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 ELNP15502 786 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 MRE11P49959 708 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 MORC1Q86VD1 984 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
SSBP2-204ENST00000504985 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 UBE2OQ9C0C9 1292 aaKnown RBP8.37□□□□□ -1.07
SSBP2-204ENST00000504985 GGNBP2Q9H3C7 697 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 MYH16Q9H6N6 1097 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 ACEP12821 1306 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 GRIK5Q16478 980 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 TRAPPC3LQ5T215 181 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 KIAA1211Q6ZU35 1233 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 MYO19Q96H55 970 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 HINFPQ9BQA5 517 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 CCDC94Q9BW85 323 aaPredicted RBP8.36□□□□□ -1.07
SSBP2-204ENST00000504985 BACH2Q9BYV9 841 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 OVOS2A0A0J9YW53 1432 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 DCCP43146 1447 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 OVOS2Q6IE36 1432 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 INSRP06213 1382 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 TMEM94Q12767 1356 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 LRRC7Q96NW7 1537 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 KIF1AQ12756 1690 aa8.36□□□□□ -1.07
SSBP2-204ENST00000504985 PSAPL1Q6NUJ1 521 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 SMG6Q86US8 1419 aaKnown RBP8.35□□□□□ -1.07
SSBP2-204ENST00000504985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSBP2-204ENST00000504985 CALR3Q96L12 384 aaKnown RBP8.35□□□□□ -1.07
SSBP2-204ENST00000504985 QTRT2Q9H974 415 aaKnown RBP8.35□□□□□ -1.07
SSBP2-204ENST00000504985 GEMIN8Q9NWZ8 242 aaKnown RBP8.35□□□□□ -1.07
SSBP2-204ENST00000504985 NCOA3Q9Y6Q9 1424 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 TRPM3Q9HCF6 1732 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-204ENST00000504985 MST1RQ04912 1400 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 ZBTB42B2RXF5 422 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 FOXO3O43524 673 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 OFD1O75665 1012 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 H2AFB2P0C5Z0 115 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 NME9Q86XW9 330 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 TTC9Q92623 222 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 SSBP4Q9BWG4 385 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-204ENST00000504985 VRTNQ9H8Y1 702 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 JPH1Q9HDC5 661 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-204ENST00000504985 ZFATQ9P243 1243 aa8.35□□□□□ -1.07
SSBP2-204ENST00000504985 TTC21BQ7Z4L5 1316 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 CCDC66A2RUB6 948 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 TOM1O60784 492 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 LGR5O75473 907 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 NFKB1P19838 968 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 IDH3AP50213 366 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 ZMYM1Q5SVZ6 1142 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
SSBP2-204ENST00000504985 PMFBP1Q8TBY8 1022 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 TRPM4Q8TD43 1214 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 NUDT8Q8WV74 236 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 C1orf167Q5SNV9 1468 aa8.34□□□□□ -1.07
SSBP2-204ENST00000504985 CDK12Q9NYV4 1490 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-204ENST00000504985 PEAK1Q9H792 1746 aa8.33□□□□□ -1.08
SSBP2-204ENST00000504985 LMOD1P29536 600 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-204ENST00000504985 IFT43Q96FT9 208 aa8.33□□□□□ -1.08
SSBP2-204ENST00000504985 PSMD1Q99460 953 aa8.33□□□□□ -1.08
SSBP2-204ENST00000504985 LPIN3Q9BQK8 851 aa8.33□□□□□ -1.08
SSBP2-204ENST00000504985 FAM13BQ9NYF5 915 aa8.33□□□□□ -1.08
SSBP2-204ENST00000504985 ZBED9Q6R2W3 1325 aa8.32□□□□□ -1.08
SSBP2-204ENST00000504985 MAP2P11137 1827 aaKnown RBP8.32□□□□□ -1.08
SSBP2-204ENST00000504985 VGLL3A8MV65 326 aa8.32□□□□□ -1.08
SSBP2-204ENST00000504985 OPLAHO14841 1288 aa8.32□□□□□ -1.08
SSBP2-204ENST00000504985 EGFRP00533 1210 aa8.32□□□□□ -1.08
SSBP2-204ENST00000504985 ZSCAN20P17040 1043 aaPredicted RBP8.32□□□□□ -1.08
SSBP2-204ENST00000504985 MTHFSP49914 203 aa8.32□□□□□ -1.08
SSBP2-204ENST00000504985 NRG1Q02297 640 aaPredicted RBP8.32□□□□□ -1.08
SSBP2-204ENST00000504985 PCSK7Q16549 785 aa8.32□□□□□ -1.08
SSBP2-204ENST00000504985 TXNRD3Q86VQ6 643 aa8.32□□□□□ -1.08
SSBP2-204ENST00000504985 TTC21AQ8NDW8 1320 aa8.32□□□□□ -1.08
SSBP2-204ENST00000504985 AATKQ6ZMQ8 1374 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 PNPLA6Q8IY17 1366 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 RGS9O75916 674 aaPredicted RBP8.31□□□□□ -1.08
SSBP2-204ENST00000504985 EPB42P16452 691 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 C11orf91Q3C1V1 193 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 SHISA2Q6UWI4 295 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 DTWD1Q8N5C7 304 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 NGDNQ8NEJ9 315 aaKnown RBP8.31□□□□□ -1.08
SSBP2-204ENST00000504985 IGFLR1Q9H665 355 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 C19orf44Q9H6X5 657 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 RGS17Q9UGC6 210 aaPredicted RBP8.31□□□□□ -1.08
SSBP2-204ENST00000504985 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 ALS2Q96Q42 1657 aa8.31□□□□□ -1.08
SSBP2-204ENST00000504985 FRAT2O75474 233 aaPredicted RBP8.3□□□□□ -1.08
SSBP2-204ENST00000504985 MICAL2O94851 1124 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms