RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 SMCR8Q8TEV9 937 aaPredicted RBP15.04■□□□□ -0
NEDD9-209ENST00000504634 IDI2Q9BXS1 227 aa15.04■□□□□ -0
NEDD9-209ENST00000504634 ABCF2Q9UG63 623 aa15.04■□□□□ -0
NEDD9-209ENST00000504634 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
NEDD9-209ENST00000504634 PHF20L1A8MW92 1017 aa15.03■□□□□ -0
NEDD9-209ENST00000504634 SLFN5Q08AF3 891 aa15.03■□□□□ -0
NEDD9-209ENST00000504634 PICALMQ13492 652 aa15.03■□□□□ -0
NEDD9-209ENST00000504634 CCDC102BQ68D86 513 aa15.03■□□□□ -0
NEDD9-209ENST00000504634 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
NEDD9-209ENST00000504634 PA2G4Q9UQ80 394 aaKnown RBP15.03■□□□□ -0
NEDD9-209ENST00000504634 PTPRAP18433 802 aa15.02■□□□□ -0
NEDD9-209ENST00000504634 ADORA1P30542 326 aa15.02■□□□□ -0
NEDD9-209ENST00000504634 SPTY2D1Q68D10 685 aaPredicted RBP15.02■□□□□ -0
NEDD9-209ENST00000504634 U2AF1L4Q8WU68 220 aaKnown RBP15.02■□□□□ -0
NEDD9-209ENST00000504634 NR2E3Q9Y5X4 410 aa15.02■□□□□ -0
NEDD9-209ENST00000504634 GAKO14976 1311 aa15.01□□□□□ -0.01
NEDD9-209ENST00000504634 TRIM75PA6NK02 468 aa15.01□□□□□ -0.01
NEDD9-209ENST00000504634 TNPO2O14787 897 aaKnown RBP15.01□□□□□ -0.01
NEDD9-209ENST00000504634 ADCY3O60266 1144 aa15.01□□□□□ -0.01
NEDD9-209ENST00000504634 FARP2O94887 1054 aaPredicted RBP15.01□□□□□ -0.01
NEDD9-209ENST00000504634 BTDP43251 543 aa15.01□□□□□ -0.01
NEDD9-209ENST00000504634 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
NEDD9-209ENST00000504634 TAOK2Q9UL54 1235 aa15.01□□□□□ -0.01
NEDD9-209ENST00000504634 NOB1Q9ULX3 412 aaKnown RBP15.01□□□□□ -0.01
NEDD9-209ENST00000504634 GABRQQ9UN88 632 aa15.01□□□□□ -0.01
NEDD9-209ENST00000504634 SLC45A1Q9Y2W3 748 aa15.01□□□□□ -0.01
NEDD9-209ENST00000504634 AFG3L2Q9Y4W6 797 aa15.01□□□□□ -0.01
NEDD9-209ENST00000504634 ATRNL1Q5VV63 1379 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 DDTLA6NHG4 134 aaPredicted RBP15□□□□□ -0.01
NEDD9-209ENST00000504634 CTNND1O60716 968 aaKnown RBP15□□□□□ -0.01
NEDD9-209ENST00000504634 FLT3LGP49771 235 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 TIMM10P62072 90 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 RASGRF1Q13972 1273 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 SH3BP5LQ7L8J4 393 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 CDCA7LQ96GN5 454 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 UNC93B1Q9H1C4 597 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 COPRSQ9NQ92 184 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 RBM27Q9P2N5 1060 aaKnown RBP15□□□□□ -0.01
NEDD9-209ENST00000504634 ZSWIM8A7E2V4 1837 aa15□□□□□ -0.01
NEDD9-209ENST00000504634 SGPL1O95470 568 aa14.99□□□□□ -0.01
NEDD9-209ENST00000504634 ELNP15502 786 aa14.99□□□□□ -0.01
NEDD9-209ENST00000504634 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
NEDD9-209ENST00000504634 ERICH6Q7L0X2 663 aa14.99□□□□□ -0.01
NEDD9-209ENST00000504634 COA7Q96BR5 231 aa14.99□□□□□ -0.01
NEDD9-209ENST00000504634 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
NEDD9-209ENST00000504634 AKAP2Q9Y2D5 859 aa14.99□□□□□ -0.01
NEDD9-209ENST00000504634 SZT2Q5T011 3432 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 MROH7-TTC4A0A0A0MT08 1334 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 PDS5AQ29RF7 1337 aaKnown RBP14.98□□□□□ -0.01
NEDD9-209ENST00000504634 A0A1B0GUL7 405 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 TFRCP02786 760 aaKnown RBP14.98□□□□□ -0.01
NEDD9-209ENST00000504634 INHAP05111 366 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 SLURP2P0DP57 97 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 MAP3K10Q02779 954 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 GORABQ5T7V8 394 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 UBE2Q1Q7Z7E8 422 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 CCDC84Q86UT8 332 aaPredicted RBP14.98□□□□□ -0.01
NEDD9-209ENST00000504634 PXYLP1Q8TE99 480 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 FAM163AQ96GL9 167 aaPredicted RBP14.98□□□□□ -0.01
NEDD9-209ENST00000504634 XAGE2Q96GT9 111 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 NEUROD6Q96NK8 337 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 DEFB118Q96PH6 123 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 MEIS3Q99687 375 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 PNMA3Q9UL41 463 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 AGTPBP1Q9UPW5 1226 aa14.98□□□□□ -0.01
NEDD9-209ENST00000504634 ZBTB22O15209 634 aa14.97□□□□□ -0.01
NEDD9-209ENST00000504634 SRGAP3O43295 1099 aa14.97□□□□□ -0.01
NEDD9-209ENST00000504634 CT47B1P0C2W7 299 aaPredicted RBP14.97□□□□□ -0.01
NEDD9-209ENST00000504634 MECOMQ03112 1051 aa14.97□□□□□ -0.01
NEDD9-209ENST00000504634 ANKRD13CQ8N6S4 541 aa14.97□□□□□ -0.01
NEDD9-209ENST00000504634 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.97□□□□□ -0.01
NEDD9-209ENST00000504634 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.97□□□□□ -0.01
NEDD9-209ENST00000504634 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
NEDD9-209ENST00000504634 GPR75-ASB3A0A0A6YYF3 556 aa14.96□□□□□ -0.01
NEDD9-209ENST00000504634 CEP290O15078 2479 aa14.96□□□□□ -0.01
NEDD9-209ENST00000504634 EVI5O60447 810 aa14.96□□□□□ -0.01
NEDD9-209ENST00000504634 LDHCP07864 332 aa14.96□□□□□ -0.01
NEDD9-209ENST00000504634 GSTO1P78417 241 aa14.96□□□□□ -0.01
NEDD9-209ENST00000504634 TFCP2Q12800 502 aa14.96□□□□□ -0.01
NEDD9-209ENST00000504634 IRF5Q13568 498 aa14.96□□□□□ -0.01
NEDD9-209ENST00000504634 TRIOBPQ9H2D6 2365 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 FAM196BA6NMK8 535 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 ZBTB7BO15156 539 aaPredicted RBP14.95□□□□□ -0.02
NEDD9-209ENST00000504634 TBC1D12O60347 775 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 GNAI3P08754 354 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 CAPN2P17655 700 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 RHBDL3P58872 404 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 SPP2Q13103 211 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 PABPC4Q13310 644 aaKnown RBP eCLIP14.95□□□□□ -0.02
NEDD9-209ENST00000504634 TREML2Q5T2D2 321 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 RAI14Q9P0K7 980 aa14.95□□□□□ -0.02
NEDD9-209ENST00000504634 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
NEDD9-209ENST00000504634 FAM110CQ1W6H9 321 aa14.94□□□□□ -0.02
NEDD9-209ENST00000504634 SPATA5Q8NB90 893 aa14.94□□□□□ -0.02
NEDD9-209ENST00000504634 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
NEDD9-209ENST00000504634 ZNF280CQ8ND82 737 aa14.94□□□□□ -0.02
NEDD9-209ENST00000504634 NOL10Q9BSC4 688 aaKnown RBP14.94□□□□□ -0.02
NEDD9-209ENST00000504634 OSBPL5Q9H0X9 879 aaPredicted RBP14.94□□□□□ -0.02
NEDD9-209ENST00000504634 HMG20BQ9P0W2 317 aa14.94□□□□□ -0.02
NEDD9-209ENST00000504634 AK9Q5TCS8 1911 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms