RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 ERVV-2B6SEH9 535 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 ATP9BO43861 1147 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 SASH1O94885 1247 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 ATP5JP18859 108 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 PDCP20941 246 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 CTSOP43234 321 aaPredicted RBP10.49□□□□□ -0.73
CASC9-201ENST00000504531 CLN3Q13286 438 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 KRT32Q14532 448 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 USPL1Q5W0Q7 1092 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 GPT2Q8TD30 523 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 NLRP3Q96P20 1036 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 UCN2Q96RP3 112 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 PANK2Q9BZ23 570 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 ARHGEF10LQ9HCE6 1279 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 NOD1Q9Y239 953 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 CCDC171Q6TFL3 1326 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 LAMB4A4D0S4 1761 aa10.49□□□□□ -0.73
CASC9-201ENST00000504531 RGPD5Q99666 1765 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 MEN1O00255 615 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 IGKV5-2P06315 115 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 ZSCAN22P10073 491 aaPredicted RBP10.48□□□□□ -0.73
CASC9-201ENST00000504531 RNF144AP50876 292 aaPredicted RBP10.48□□□□□ -0.73
CASC9-201ENST00000504531 PKP1Q13835 747 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 FAM182BQ5T319 152 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 TSHZ3Q63HK5 1081 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 RUFY3Q7L099 469 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 PLBD2Q8NHP8 589 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
CASC9-201ENST00000504531 BICC1Q9H694 974 aaKnown RBP10.48□□□□□ -0.73
CASC9-201ENST00000504531 RRAGDQ9NQL2 400 aaPredicted RBP10.48□□□□□ -0.73
CASC9-201ENST00000504531 RPAP1Q9BWH6 1393 aaPredicted RBP10.48□□□□□ -0.73
CASC9-201ENST00000504531 YY1P25490 414 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 AK2P54819 239 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 NCOA4Q13772 614 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 PROSER3Q2NL68 480 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 CAVIN1Q6NZI2 390 aaKnown RBP10.47□□□□□ -0.73
CASC9-201ENST00000504531 AACSQ86V21 672 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 ZSCAN30Q86W11 494 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 TTC5Q8N0Z6 440 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 RGS22Q8NE09 1264 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 RNF217Q8TC41 542 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 EAF2Q96CJ1 260 aaPredicted RBP10.47□□□□□ -0.73
CASC9-201ENST00000504531 MED23Q9ULK4 1368 aa10.47□□□□□ -0.73
CASC9-201ENST00000504531 FIGNL2A6NMB9 653 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 STX6O43752 255 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 RFX5P48382 616 aaPredicted RBP10.46□□□□□ -0.73
CASC9-201ENST00000504531 UBE2HP62256 183 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 CWF19L2Q2TBE0 894 aaKnown RBP10.46□□□□□ -0.73
CASC9-201ENST00000504531 CWC27Q6UX04 472 aaKnown RBP10.46□□□□□ -0.73
CASC9-201ENST00000504531 COPS6Q7L5N1 327 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.46□□□□□ -0.73
CASC9-201ENST00000504531 ZNF775Q96BV0 537 aaPredicted RBP10.46□□□□□ -0.73
CASC9-201ENST00000504531 IL25Q9H293 177 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 PDRG1Q9NUG6 133 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 NLRP2Q9NX02 1062 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.73
CASC9-201ENST00000504531 C5P01031 1676 aa10.46□□□□□ -0.74
CASC9-201ENST00000504531 SPEF2Q9C093 1822 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 MEGF6O75095 1541 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 ELP1O95163 1332 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 SOBPA7XYQ1 873 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 H7C1W4 665 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 HMGB1P09429 215 aaKnown RBP10.45□□□□□ -0.74
CASC9-201ENST00000504531 CASP7P55210 303 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 FOXD4L5Q5VV16 416 aaPredicted RBP10.45□□□□□ -0.74
CASC9-201ENST00000504531 CREB3L3Q68CJ9 461 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 TRIM50Q86XT4 487 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 XAGE3Q8WTP9 111 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 ZNF496Q96IT1 587 aaPredicted RBP10.45□□□□□ -0.74
CASC9-201ENST00000504531 UPF3BQ9BZI7 483 aaKnown RBP10.45□□□□□ -0.74
CASC9-201ENST00000504531 BTG4Q9NY30 223 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 TMEM63CQ9P1W3 806 aa10.45□□□□□ -0.74
CASC9-201ENST00000504531 NXF1Q9UBU9 619 aaKnown RBP10.45□□□□□ -0.74
CASC9-201ENST00000504531 NOL7Q9UMY1 257 aaKnown RBP10.45□□□□□ -0.74
CASC9-201ENST00000504531 PCDH11XQ9BZA7 1347 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 PCDH11YQ9BZA8 1340 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 USP17L3A6NCW0 530 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 USP17L4A6NCW7 530 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 CYP27B1O15528 508 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 ZNF500O60304 480 aaPredicted RBP10.44□□□□□ -0.74
CASC9-201ENST00000504531 F13A1P00488 732 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 ANXA1P04083 346 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 SYT1P21579 422 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 PTPN12Q05209 780 aaKnown RBP10.44□□□□□ -0.74
CASC9-201ENST00000504531 TRIM28Q13263 835 aaKnown RBP10.44□□□□□ -0.74
CASC9-201ENST00000504531 CCDC183Q5T5S1 534 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 USP17L1Q7RTZ2 530 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 LYSMD3Q7Z3D4 306 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 FBXL16Q8N461 479 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 CNKSR1Q969H4 720 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 TEX13AQ9BXU3 409 aaPredicted RBP10.44□□□□□ -0.74
CASC9-201ENST00000504531 PPP1R1BQ9UD71 204 aaPredicted RBP10.44□□□□□ -0.74
CASC9-201ENST00000504531 RBM8AQ9Y5S9 174 aaKnown RBP10.44□□□□□ -0.74
CASC9-201ENST00000504531 UBR2Q8IWV8 1755 aa10.44□□□□□ -0.74
CASC9-201ENST00000504531 GLI3P10071 1580 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms