RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 GBP3Q9H0R5 595 aa16.13■□□□□ 0.17
COL6A4P2-202ENST00000504443 SAMSN1Q9NSI8 373 aaKnown RBP16.13■□□□□ 0.17
COL6A4P2-202ENST00000504443 NFE2L3Q9Y4A8 694 aa16.13■□□□□ 0.17
COL6A4P2-202ENST00000504443 PCDHA5Q9Y5H7 936 aa16.13■□□□□ 0.17
COL6A4P2-202ENST00000504443 UBR1Q8IWV7 1749 aa16.13■□□□□ 0.17
COL6A4P2-202ENST00000504443 SYNE3Q6ZMZ3 975 aa16.13■□□□□ 0.17
COL6A4P2-202ENST00000504443 DHX32Q7L7V1 743 aaKnown RBP16.13■□□□□ 0.17
COL6A4P2-202ENST00000504443 FAM107BQ9H098 131 aa16.13■□□□□ 0.17
COL6A4P2-202ENST00000504443 STIM1Q13586 685 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 PROSER3Q2NL68 480 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 LRCH2Q5VUJ6 765 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 MYSM1Q5VVJ2 828 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 TUBE1Q9UJT0 475 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 FRMD3A2A2Y4 597 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 PAX7P23759 505 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 USP8P40818 1118 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 AMPHP49418 695 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 RBL2Q08999 1139 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 KIRREL3Q8IZU9 778 aa16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 GNL3LQ9NVN8 582 aaKnown RBP16.12■□□□□ 0.17
COL6A4P2-202ENST00000504443 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 ENC1O14682 589 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 CMA1P23946 247 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 GNGT1P63211 74 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 EGFL6Q8IUX8 553 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 FAM76AQ8TAV0 307 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 N4BP2L2Q92802 583 aaPredicted RBP16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 HDAC6Q9UBN7 1215 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 ROBO2Q9HCK4 1378 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 AGPSO00116 658 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 MYBL2P10244 700 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 GPTP24298 496 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 SETQ01105 290 aaPredicted RBP16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 ACTN3Q08043 901 aaPredicted RBP16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 ANO1Q5XXA6 986 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 DDX46Q7L014 1031 aaKnown RBP16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 C8orf76Q96K31 380 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 CENPHQ9H3R5 247 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 POLR3EQ9NVU0 708 aa16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 ZC3H4Q9UPT8 1303 aaKnown RBP16.11■□□□□ 0.17
COL6A4P2-202ENST00000504443 GOLGA6CA6NDK9 693 aa16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 AKR1B15C9JRZ8 316 aaPredicted RBP16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 SRGAP2O75044 1071 aa16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 NEBLO76041 1014 aa16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 GOLGA6DP0CG33 693 aa16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 AARSP49588 968 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 GOLGA6AQ9NYA3 693 aa16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 EXOSC10Q01780 885 aaKnown RBP16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 PPARDQ03181 441 aa16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 PRPF38AQ8NAV1 312 aaKnown RBP16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 ZKSCAN4Q969J2 545 aaPredicted RBP16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 CABS1Q96KC9 395 aa16.1■□□□□ 0.17
COL6A4P2-202ENST00000504443 YEATS4O95619 227 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 FKBP15Q5T1M5 1219 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 MIEF2Q96C03 454 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 SGSM3Q96HU1 749 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 CAPZA3Q96KX2 299 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 NAPGQ99747 312 aaPredicted RBP16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 CAPS2Q9BXY5 557 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 TRIM10Q9UDY6 481 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 DBNLQ9UJU6 430 aaKnown RBP16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 ADAMTS13Q76LX8 1427 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 KCNA6P17658 529 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 ELF1P32519 619 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 CTCFLQ8NI51 663 aaPredicted RBP16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 RNF217Q8TC41 542 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 CRACR2AQ9BSW2 395 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 SHOX2O60902 331 aaPredicted RBP16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 MRPS25P82663 173 aaKnown RBP16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 MYO6Q9UM54 1294 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 NRXN3Q9Y4C0 1643 aa16.09■□□□□ 0.17
COL6A4P2-202ENST00000504443 FLT4P35916 1363 aa16.08■□□□□ 0.17
COL6A4P2-202ENST00000504443 SHTN1A0MZ66 631 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 PIP4K2BP78356 416 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 MAP9Q49MG5 647 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 NAIF1Q69YI7 327 aaPredicted RBP16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 GRAMD1CQ8IYS0 662 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 COG1Q8WTW3 980 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 AIFM3Q96NN9 605 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 TFR2Q9UP52 801 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 MED15Q96RN5 788 aa16.08■□□□□ 0.16
COL6A4P2-202ENST00000504443 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 PTPRUQ92729 1446 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 LAMA4Q16363 1823 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 GOLIM4O00461 696 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 COBLO75128 1261 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 RDXP35241 583 aaKnown RBP16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 FNTAP49354 379 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms