RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 INTS3Q68E01 1043 aaKnown RBP11.11□□□□□ -0.63
SSBP2-202ENST00000504136 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 CERS5Q8N5B7 392 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 MXD3Q9BW11 206 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 PRDM10Q9NQV6 1147 aa11.11□□□□□ -0.63
SSBP2-202ENST00000504136 NOB1Q9ULX3 412 aaKnown RBP11.11□□□□□ -0.63
SSBP2-202ENST00000504136 FOXN1O15353 648 aa11.1□□□□□ -0.63
SSBP2-202ENST00000504136 KDM4AO75164 1064 aa11.1□□□□□ -0.63
SSBP2-202ENST00000504136 PDE8BO95263 885 aa11.1□□□□□ -0.63
SSBP2-202ENST00000504136 FGFR2P21802 821 aa11.1□□□□□ -0.63
SSBP2-202ENST00000504136 FKBP1BP68106 108 aa11.1□□□□□ -0.63
SSBP2-202ENST00000504136 GTF2IP78347 998 aa11.1□□□□□ -0.63
SSBP2-202ENST00000504136 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
SSBP2-202ENST00000504136 COL13A1Q5TAT6 717 aaPredicted RBP11.1□□□□□ -0.63
SSBP2-202ENST00000504136 ANGEL2Q5VTE6 544 aaKnown RBP11.1□□□□□ -0.63
SSBP2-202ENST00000504136 CYP4F22Q6NT55 531 aa11.1□□□□□ -0.63
SSBP2-202ENST00000504136 FBXO33Q7Z6M2 555 aa11.1□□□□□ -0.63
SSBP2-202ENST00000504136 FAM84BQ96KN1 310 aaPredicted RBP11.1□□□□□ -0.63
SSBP2-202ENST00000504136 GBA2Q9HCG7 927 aaPredicted RBP11.1□□□□□ -0.63
SSBP2-202ENST00000504136 FAM155AB1AL88 458 aaPredicted RBP11.09□□□□□ -0.63
SSBP2-202ENST00000504136 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
SSBP2-202ENST00000504136 MTX1Q13505 466 aa11.09□□□□□ -0.63
SSBP2-202ENST00000504136 NBPF9Q3BBW0 867 aa11.09□□□□□ -0.63
SSBP2-202ENST00000504136 LRRC24Q50LG9 513 aa11.09□□□□□ -0.63
SSBP2-202ENST00000504136 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
SSBP2-202ENST00000504136 CDCA5Q96FF9 252 aa11.09□□□□□ -0.63
SSBP2-202ENST00000504136 HDAC5Q9UQL6 1122 aa11.09□□□□□ -0.63
SSBP2-202ENST00000504136 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
SSBP2-202ENST00000504136 MYH13Q9UKX3 1938 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 EYA2O00167 538 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 CIAO1O76071 339 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 UBTFL1P0CB47 393 aaPredicted RBP11.08□□□□□ -0.64
SSBP2-202ENST00000504136 HIBADHP31937 336 aaKnown RBP11.08□□□□□ -0.64
SSBP2-202ENST00000504136 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
SSBP2-202ENST00000504136 USP46P62068 366 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 NOGQ13253 232 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 ATG9AQ7Z3C6 839 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 KIAA0825Q8IV33 1275 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 C2orf69Q8N8R5 385 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 HDAC9Q9UKV0 1011 aa11.08□□□□□ -0.64
SSBP2-202ENST00000504136 HOXA2O43364 376 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 HSPA8P11142 646 aaKnown RBP11.07□□□□□ -0.64
SSBP2-202ENST00000504136 TRIM27P14373 513 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 HUNKP57058 714 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 METTL24Q5JXM2 366 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
SSBP2-202ENST00000504136 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 MEIS3Q99687 375 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 BEGAINQ9BUH8 593 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 COPRSQ9NQ92 184 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 PPP2R3BQ9Y5P8 575 aa11.07□□□□□ -0.64
SSBP2-202ENST00000504136 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
SSBP2-202ENST00000504136 CA12O43570 354 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 PLIN1O60240 522 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 NR1I2O75469 434 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 GNAI3P08754 354 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 GYG1P46976 350 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 PUM3Q15397 648 aaKnown RBP11.06□□□□□ -0.64
SSBP2-202ENST00000504136 RGMBQ6NW40 437 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 KLHDC4Q8TBB5 520 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 SPIRE2Q8WWL2 714 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 AIDAQ96BJ3 306 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 MRIQ9BWK5 157 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 KDM4CQ9H3R0 1056 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 ZNF408Q9H9D4 720 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 SERPINA10Q9UK55 444 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 SLC27A5Q9Y2P5 690 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 SSC5DA1L4H1 1573 aa11.06□□□□□ -0.64
SSBP2-202ENST00000504136 TLL1O43897 1013 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 AOC2O75106 756 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 HDLBPQ00341 1268 aaKnown RBP11.05□□□□□ -0.64
SSBP2-202ENST00000504136 HNRNPUQ00839 825 aaKnown RBP eCLIP11.05□□□□□ -0.64
SSBP2-202ENST00000504136 DLGAP5Q15398 846 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 MAP3K11Q16584 847 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 MFSD14BQ5SR56 506 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 TBC1D22AQ8WUA7 517 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 LPIN2Q92539 896 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 HLA-CQ95604 372 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 THAP11Q96EK4 314 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 SUGT1Q9Y2Z0 365 aa11.05□□□□□ -0.64
SSBP2-202ENST00000504136 LRRFIP2Q9Y608 721 aaKnown RBP11.05□□□□□ -0.64
SSBP2-202ENST00000504136 BCAR3O75815 825 aa11.04□□□□□ -0.64
SSBP2-202ENST00000504136 CFAP100Q494V2 611 aa11.04□□□□□ -0.64
SSBP2-202ENST00000504136 CAVIN4Q5BKX8 364 aa11.04□□□□□ -0.64
SSBP2-202ENST00000504136 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
SSBP2-202ENST00000504136 AKAP11Q9UKA4 1901 aa11.03□□□□□ -0.64
SSBP2-202ENST00000504136 UNCXA6NJT0 531 aa11.03□□□□□ -0.64
SSBP2-202ENST00000504136 IFIT1P09914 478 aaKnown RBP11.03□□□□□ -0.64
SSBP2-202ENST00000504136 IL15P40933 162 aaPredicted RBP11.03□□□□□ -0.64
SSBP2-202ENST00000504136 LDLRAD1Q5T700 205 aa11.03□□□□□ -0.64
SSBP2-202ENST00000504136 PRMT6Q96LA8 375 aaPredicted RBP11.03□□□□□ -0.64
SSBP2-202ENST00000504136 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
SSBP2-202ENST00000504136 SAGE1Q9NXZ1 904 aa11.03□□□□□ -0.64
SSBP2-202ENST00000504136 PCDHAC2Q9Y5I4 1007 aa11.03□□□□□ -0.64
SSBP2-202ENST00000504136 AOX1Q06278 1338 aa11.03□□□□□ -0.64
SSBP2-202ENST00000504136 PDS5AQ29RF7 1337 aaKnown RBP11.03□□□□□ -0.64
SSBP2-202ENST00000504136 SLC5A1P13866 664 aa11.02□□□□□ -0.65
SSBP2-202ENST00000504136 NF2P35240 595 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms