RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 V9GY48 417 aaPredicted RBP18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 PIK3AP1Q6ZUJ8 805 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 BLMP54132 1417 aaPredicted RBP18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 CAPN2P17655 700 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 TUBB2AQ13885 445 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 MLKLQ8NB16 471 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 TUBB2BQ9BVA1 445 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 ARHGEF10O15013 1369 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 MAGI2Q86UL8 1455 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 ATP2C2O75185 946 aa18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 CCT6AP40227 531 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 DCAF17Q5H9S7 520 aaPredicted RBP18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 SAP30BPQ9UHR5 308 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 ZHX1Q9UKY1 873 aaPredicted RBP18.56■□□□□ 0.56
PCDHA1-203ENST00000504120 RHOXF2BP0C7M4 288 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 RAPGEF1Q13905 1077 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 HAUS3Q68CZ6 603 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 RHOXF2Q9BQY4 288 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 NCOA5Q9HCD5 579 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 LEO1Q8WVC0 666 aaPredicted RBP18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 MYOM2P54296 1465 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 UFL1O94874 794 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 PPP1R9BQ96SB3 815 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 TTF2Q9UNY4 1162 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 WDR66Q8TBY9 1149 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 SSX2IPQ9Y2D8 614 aa18.55■□□□□ 0.56
PCDHA1-203ENST00000504120 CHD1O14646 1710 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 ERO1AQ96HE7 468 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 ZNF594Q96JF6 807 aaPredicted RBP18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 ZNF445P59923 1031 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 IFT81Q8WYA0 676 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 ZBTB21Q9ULJ3 1066 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 STK24Q9Y6E0 443 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 MAST3O60307 1309 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 TTC38Q5R3I4 469 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 TM6SF1Q9BZW5 370 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 GPCPD1Q9NPB8 672 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 YEATS2Q9ULM3 1422 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 ZCCHC11Q5TAX3 1644 aaKnown RBP18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 CYP26C1Q6V0L0 522 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 HDXQ7Z353 690 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 NBPF11Q86T75 865 aa18.54■□□□□ 0.56
PCDHA1-203ENST00000504120 BACH1O14867 736 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 FAM212AQ96EL1 285 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 MROH5Q6ZUA9 1318 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 MNAT1P51948 309 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 CALCOCO2Q13137 446 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 CCDC94Q9BW85 323 aaPredicted RBP18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 IBTKQ9P2D0 1353 aaPredicted RBP18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 KDM6BO15054 1643 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 FANCCQ00597 558 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 SELENOSQ9BQE4 189 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 POLR2DO15514 142 aaKnown RBP18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 JAKMIP2Q96AA8 810 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 VPS18Q9P253 973 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 IMPACTQ9P2X3 320 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 SYNRGQ9UMZ2 1314 aa18.53■□□□□ 0.56
PCDHA1-203ENST00000504120 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 DSCC1Q9BVC3 393 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 ATP2A2P16615 1042 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 NLRP12P59046 1061 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 SEL1L2Q5TEA6 688 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 NAP1L3Q99457 506 aaPredicted RBP18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 VPS16Q9H269 839 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 GGA1Q9UJY5 639 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 EBAG9O00559 213 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 CCNT1O60563 726 aaKnown RBP18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 PPP1R7Q15435 360 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 CCDC26Q8TAB7 109 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 NUP58Q9BVL2 599 aa18.52■□□□□ 0.56
PCDHA1-203ENST00000504120 ATP5JP18859 108 aa18.52■□□□□ 0.55
PCDHA1-203ENST00000504120 ZNF75DP51815 510 aa18.52■□□□□ 0.55
PCDHA1-203ENST00000504120 PPP2R3AQ06190 1150 aa18.52■□□□□ 0.55
PCDHA1-203ENST00000504120 PAK1Q13153 545 aa18.52■□□□□ 0.55
PCDHA1-203ENST00000504120 CFAP58Q5T655 872 aa18.52■□□□□ 0.55
PCDHA1-203ENST00000504120 CSGALNACT2Q8N6G5 542 aa18.52■□□□□ 0.55
PCDHA1-203ENST00000504120 NAPGQ99747 312 aaPredicted RBP18.52■□□□□ 0.55
PCDHA1-203ENST00000504120 LZTS2Q9BRK4 669 aa18.52■□□□□ 0.55
PCDHA1-203ENST00000504120 ZNF202O95125 648 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 A1BGP04217 495 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 EVCP57679 992 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 RBM26Q5T8P6 1007 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 KRT25Q7Z3Z0 450 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 MXRA7P84157 204 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 CCDC121Q6ZUS5 278 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 KIFAP3Q92845 792 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 CBX8Q9HC52 389 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 SPATA5Q8NB90 893 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 ARHGEF10LQ9HCE6 1279 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 MSL1Q68DK7 614 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 CCDC87Q9NVE4 849 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 OGFRQ9NZT2 677 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 CCNL1Q9UK58 526 aaPredicted RBP18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 CALUO43852 315 aaPredicted RBP18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 POLD1P28340 1107 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 WDR44Q5JSH3 913 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 KRT40Q6A162 431 aa18.51■□□□□ 0.55
PCDHA1-203ENST00000504120 FAM173BQ6P4H8 233 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms