RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 FDX1P10109 184 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 EIF2S2P20042 333 aaKnown RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 GPSM2P81274 684 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 SRSF11Q05519 484 aaKnown RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 GRAPQ13588 217 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 FBXO46Q6PJ61 603 aaPredicted RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 LYPD4Q6UWN0 246 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 DDX46Q7L014 1031 aaKnown RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 ZNF34Q8IZ26 560 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 GRAPLQ8TC17 118 aaPredicted RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 CELF1Q92879 486 aaKnown RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 CCDC102AQ96A19 550 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 NLRP3Q96P20 1036 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 CCDC85AQ96PX6 553 aaPredicted RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 UTP14AQ9BVJ6 771 aaKnown RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 MXD3Q9BW11 206 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 RTFDC1Q9BY42 306 aaPredicted RBP4.81□□□□□ -1.64
USP46-205ENST00000504078 PCGF6Q9BYE7 350 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 GPCPD1Q9NPB8 672 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 PGAP2Q9UHJ9 254 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 TRIM17Q9Y577 477 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 PSME4Q14997 1843 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 BRCA2P51587 3418 aa4.81□□□□□ -1.64
USP46-205ENST00000504078 OTOFQ9HC10 1997 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 SSC5DA1L4H1 1573 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 SLC35F4A4IF30 521 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 ERVV-1B6SEH8 477 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 UFL1O94874 794 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 EN2P19622 333 aaPredicted RBP4.8□□□□□ -1.64
USP46-205ENST00000504078 EIF4A1P60842 406 aaKnown RBP4.8□□□□□ -1.64
USP46-205ENST00000504078 CAP1Q01518 475 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 ARID5BQ14865 1188 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 KRT24Q2M2I5 525 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 WASHC4Q2M389 1173 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 GIGYF2Q6Y7W6 1299 aaKnown RBP4.8□□□□□ -1.64
USP46-205ENST00000504078 PPP1R42Q7Z4L9 355 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 VWA5B2Q8N398 1253 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 CD99L2Q8TCZ2 262 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 XAGE3Q8WTP9 111 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 ZC3H15Q8WU90 426 aaKnown RBP4.8□□□□□ -1.64
USP46-205ENST00000504078 GCC1Q96CN9 775 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 POLLQ9UGP5 575 aa4.8□□□□□ -1.64
USP46-205ENST00000504078 NSFL1CQ9UNZ2 370 aaKnown RBP4.8□□□□□ -1.64
USP46-205ENST00000504078 ATP5J2-PTCD1G3V325 749 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 FKTNO75072 461 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 CELA2BP08218 269 aaPredicted RBP4.79□□□□□ -1.64
USP46-205ENST00000504078 NR3C2P08235 984 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 ITGA6P23229 1130 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 GRM5P41594 1212 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 PARP10Q53GL7 1025 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 DESI1Q6ICB0 168 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 OTOP1Q7RTM1 612 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 NLRP10Q86W26 655 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 SP8Q8IXZ3 490 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 JARID2Q92833 1246 aaPredicted RBP4.79□□□□□ -1.64
USP46-205ENST00000504078 CFAP53Q96M91 514 aa4.79□□□□□ -1.64
USP46-205ENST00000504078 FAM217BQ9NTX9 383 aaPredicted RBP4.79□□□□□ -1.64
USP46-205ENST00000504078 TRMT112Q9UI30 125 aaKnown RBP4.79□□□□□ -1.64
USP46-205ENST00000504078 CENPFP49454 3210 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 SH3TC1Q8TE82 1336 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 WTIPA6NIX2 430 aaPredicted RBP4.78□□□□□ -1.64
USP46-205ENST00000504078 PTPN12Q05209 780 aaKnown RBP4.78□□□□□ -1.64
USP46-205ENST00000504078 TAF7Q15545 349 aaPredicted RBP4.78□□□□□ -1.64
USP46-205ENST00000504078 NBPF9Q3BBW0 867 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 LRP10Q7Z4F1 713 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 PODNQ7Z5L7 613 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 TBC1D16Q8TBP0 767 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 DPF2Q92785 391 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 FAM89AQ96GI7 184 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 CLMNQ96JQ2 1002 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 MYOZ2Q9NPC6 264 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 SEC31BQ9NQW1 1179 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 TSPYL4Q9UJ04 414 aa4.78□□□□□ -1.64
USP46-205ENST00000504078 CNTNAP5Q8WYK1 1306 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 CDC14CA4D256 554 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 SPDYE5A6NIY4 337 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 FIGNL2A6NMB9 653 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 H0YGN5 161 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 IGF2BP3O00425 579 aaKnown RBP eCLIP4.77□□□□□ -1.65
USP46-205ENST00000504078 DLL1O00548 723 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 PER1O15534 1290 aaPredicted RBP4.77□□□□□ -1.65
USP46-205ENST00000504078 BBOX1O75936 387 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 RPS12P25398 132 aaKnown RBP4.77□□□□□ -1.65
USP46-205ENST00000504078 PKN2Q16513 984 aaKnown RBP4.77□□□□□ -1.65
USP46-205ENST00000504078 RSBN1LQ6PCB5 846 aaPredicted RBP4.77□□□□□ -1.65
USP46-205ENST00000504078 COPS6Q7L5N1 327 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 CHPF2Q9P2E5 772 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 ANKIB1Q9P2G1 1089 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 ANGEL1Q9UNK9 670 aaKnown RBP4.77□□□□□ -1.65
USP46-205ENST00000504078 PCDHAC2Q9Y5I4 1007 aa4.77□□□□□ -1.65
USP46-205ENST00000504078 AOX1Q06278 1338 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 CLRN2A0PK11 232 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 PRKCSHP14314 528 aaPredicted RBP4.76□□□□□ -1.65
USP46-205ENST00000504078 KLRK1P26718 216 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 PPP2R1AP30153 589 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 CTHP32929 405 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 GJA5P36382 358 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 ZNF280AP59817 542 aaPredicted RBP4.76□□□□□ -1.65
USP46-205ENST00000504078 SREBF2Q12772 1141 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 CRHR2Q13324 411 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms