RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 GNL3LQ9NVN8 582 aaKnown RBP11.2□□□□□ -0.62
PROM1-204ENST00000503884 PA2G4Q9UQ80 394 aaKnown RBP11.2□□□□□ -0.62
PROM1-204ENST00000503884 LRRFIP2Q9Y608 721 aaKnown RBP11.2□□□□□ -0.62
PROM1-204ENST00000503884 PDHXO00330 501 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 ENTPD3O75355 529 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 BCRP11274 1271 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 ADORA1P30542 326 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 MTX1Q13505 466 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 KIF22Q14807 665 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 CCDC102BQ68D86 513 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 GPAT2Q6NUI2 795 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 SH3TC2Q8TF17 1288 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 MEIS3Q99687 375 aa11.19□□□□□ -0.62
PROM1-204ENST00000503884 API5Q9BZZ5 524 aaKnown RBP11.19□□□□□ -0.62
PROM1-204ENST00000503884 DOCK3Q8IZD9 2030 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 CXCL11O14625 94 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 RGS3P49796 1198 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 ZNF384Q8TF68 577 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 ARHGAP45Q92619 1136 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 TRIM47Q96LD4 638 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 SRRDQ9UH36 339 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 CPA4Q9UI42 421 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 HDAC5Q9UQL6 1122 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 TRIOBPQ9H2D6 2365 aa11.18□□□□□ -0.62
PROM1-204ENST00000503884 A0A0G2JLL6 359 aaPredicted RBP11.17□□□□□ -0.62
PROM1-204ENST00000503884 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
PROM1-204ENST00000503884 OSBPP22059 807 aa11.17□□□□□ -0.62
PROM1-204ENST00000503884 PSMC4P43686 418 aa11.17□□□□□ -0.62
PROM1-204ENST00000503884 RARSP54136 660 aaKnown RBP11.17□□□□□ -0.62
PROM1-204ENST00000503884 TIMM10P62072 90 aa11.17□□□□□ -0.62
PROM1-204ENST00000503884 SLC4A8Q2Y0W8 1093 aa11.17□□□□□ -0.62
PROM1-204ENST00000503884 PRRT2Q7Z6L0 340 aaPredicted RBP11.17□□□□□ -0.62
PROM1-204ENST00000503884 SCYL3Q8IZE3 742 aa11.17□□□□□ -0.62
PROM1-204ENST00000503884 ZGPATQ8N5A5 531 aaKnown RBP11.17□□□□□ -0.62
PROM1-204ENST00000503884 SHISA4Q96DD7 197 aa11.17□□□□□ -0.62
PROM1-204ENST00000503884 DDX4Q9NQI0 724 aaKnown RBP11.17□□□□□ -0.62
PROM1-204ENST00000503884 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.17□□□□□ -0.62
PROM1-204ENST00000503884 ATAD5Q96QE3 1844 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 SLURP2P0DP57 97 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 PTPRAP18433 802 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 RHBDL3P58872 404 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 MTFR1Q15390 333 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 UBE2Q1Q7Z7E8 422 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 XAGE2Q96GT9 111 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 AFG3L2Q9Y4W6 797 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 CDK5RAP2Q96SN8 1893 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 SIPA1L1O43166 1804 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 LOC285556D6RIA3 1793 aa11.16□□□□□ -0.62
PROM1-204ENST00000503884 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 COL2A1P02458 1487 aaPredicted RBP11.15□□□□□ -0.62
PROM1-204ENST00000503884 GPR75-ASB3A0A0A6YYF3 556 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 A0A1B0GUL7 405 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 TBC1D12O60347 775 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 CYP2C8P10632 490 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 HOXD10P28358 340 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 GRK4P32298 578 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 FXR1P51114 621 aaKnown RBP eCLIP11.15□□□□□ -0.62
PROM1-204ENST00000503884 TFCP2Q12800 502 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 PARK7Q99497 189 aaKnown RBP11.15□□□□□ -0.62
PROM1-204ENST00000503884 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 ZHX2Q9Y6X8 837 aa11.15□□□□□ -0.62
PROM1-204ENST00000503884 FOCADQ5VW36 1801 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 MYPNQ86TC9 1320 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 SRGAP3O43295 1099 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 CTNND1O60716 968 aaKnown RBP11.14□□□□□ -0.63
PROM1-204ENST00000503884 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
PROM1-204ENST00000503884 GNAI3P08754 354 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 BTDP43251 543 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 MECOMQ03112 1051 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 FASTKD5Q7L8L6 764 aaKnown RBP11.14□□□□□ -0.63
PROM1-204ENST00000503884 DZIP1Q86YF9 867 aaKnown RBP11.14□□□□□ -0.63
PROM1-204ENST00000503884 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 NSUN4Q96CB9 384 aaKnown RBP11.14□□□□□ -0.63
PROM1-204ENST00000503884 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 ABCF2Q9UG63 623 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 AKAP2Q9Y2D5 859 aa11.14□□□□□ -0.63
PROM1-204ENST00000503884 MYO5AQ9Y4I1 1855 aaKnown RBP11.14□□□□□ -0.63
PROM1-204ENST00000503884 LAMA3Q16787 3333 aa11.13□□□□□ -0.63
PROM1-204ENST00000503884 FMNL1O95466 1100 aaPredicted RBP11.13□□□□□ -0.63
PROM1-204ENST00000503884 MAP4K4O95819 1239 aaPredicted RBP11.13□□□□□ -0.63
PROM1-204ENST00000503884 GJB1P08034 283 aa11.13□□□□□ -0.63
PROM1-204ENST00000503884 ARID4AP29374 1257 aaPredicted RBP11.13□□□□□ -0.63
PROM1-204ENST00000503884 GJA8P48165 433 aa11.13□□□□□ -0.63
PROM1-204ENST00000503884 PRKCZQ05513 592 aa11.13□□□□□ -0.63
PROM1-204ENST00000503884 MVPQ14764 893 aaKnown RBP11.13□□□□□ -0.63
PROM1-204ENST00000503884 SPTY2D1Q68D10 685 aaPredicted RBP11.13□□□□□ -0.63
PROM1-204ENST00000503884 GABRQQ9UN88 632 aa11.13□□□□□ -0.63
PROM1-204ENST00000503884 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
PROM1-204ENST00000503884 MAST2Q6P0Q8 1798 aa11.13□□□□□ -0.63
PROM1-204ENST00000503884 H0YGN5 161 aa11.12□□□□□ -0.63
PROM1-204ENST00000503884 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
PROM1-204ENST00000503884 CCL5P13501 91 aa11.12□□□□□ -0.63
PROM1-204ENST00000503884 TRIM27P14373 513 aa11.12□□□□□ -0.63
PROM1-204ENST00000503884 FCGRTP55899 365 aa11.12□□□□□ -0.63
PROM1-204ENST00000503884 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
PROM1-204ENST00000503884 ERICH6Q7L0X2 663 aa11.12□□□□□ -0.63
PROM1-204ENST00000503884 SPATA5Q8NB90 893 aa11.12□□□□□ -0.63
PROM1-204ENST00000503884 NKX2-3Q8TAU0 364 aa11.12□□□□□ -0.63
PROM1-204ENST00000503884 RAET1EQ8TD07 263 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms