RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 NKD1Q969G9 470 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 RNPC3Q96LT9 517 aaKnown RBP7.03□□□□□ -1.28
SCLT1-206ENST00000503565 SRPK1Q96SB4 655 aaKnown RBP7.03□□□□□ -1.28
SCLT1-206ENST00000503565 SRRTQ9BXP5 876 aaKnown RBP7.03□□□□□ -1.28
SCLT1-206ENST00000503565 TRIM55Q9BYV6 548 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 SNTG2Q9NY99 539 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 PPT2Q9UMR5 302 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 PCDHB5Q9Y5E4 795 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 SMAD7O15105 426 aaKnown RBP7.02□□□□□ -1.29
SCLT1-206ENST00000503565 HSD3B2P26439 372 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 RSPO4Q2I0M5 234 aaPredicted RBP7.02□□□□□ -1.29
SCLT1-206ENST00000503565 SEZ6Q53EL9 994 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 RPS26P11Q5JNZ5 115 aaPredicted RBP7.02□□□□□ -1.29
SCLT1-206ENST00000503565 NKAPLQ5M9Q1 402 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 TXNRD3Q86VQ6 643 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 MAP4K3Q8IVH8 894 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 FAM169BQ8N8A8 192 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 ASAP3Q8TDY4 903 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 BSNDQ8WZ55 320 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 LRRC3Q9BY71 257 aa7.02□□□□□ -1.29
SCLT1-206ENST00000503565 FAM221AA4D161 298 aa7.01□□□□□ -1.29
SCLT1-206ENST00000503565 F8W735 103 aaPredicted RBP7.01□□□□□ -1.29
SCLT1-206ENST00000503565 H3BRJ5 948 aa7.01□□□□□ -1.29
SCLT1-206ENST00000503565 ENPP3O14638 875 aa7.01□□□□□ -1.29
SCLT1-206ENST00000503565 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
SCLT1-206ENST00000503565 CD68P34810 354 aaPredicted RBP7.01□□□□□ -1.29
SCLT1-206ENST00000503565 IREB2P48200 963 aaKnown RBP7.01□□□□□ -1.29
SCLT1-206ENST00000503565 ZNF157P51786 506 aaPredicted RBP7.01□□□□□ -1.29
SCLT1-206ENST00000503565 NRG1Q02297 640 aaPredicted RBP7.01□□□□□ -1.29
SCLT1-206ENST00000503565 TMEM130Q8N3G9 435 aa7.01□□□□□ -1.29
SCLT1-206ENST00000503565 CELF2-AS1Q8N7Q2 184 aa7.01□□□□□ -1.29
SCLT1-206ENST00000503565 MEGF10Q96KG7 1140 aa7.01□□□□□ -1.29
SCLT1-206ENST00000503565 DEPDC7Q96QD5 511 aa7.01□□□□□ -1.29
SCLT1-206ENST00000503565 GPN3Q9UHW5 284 aaPredicted RBP7.01□□□□□ -1.29
SCLT1-206ENST00000503565 USP21Q9UK80 565 aa7.01□□□□□ -1.29
SCLT1-206ENST00000503565 ROBO2Q9HCK4 1378 aa7□□□□□ -1.29
SCLT1-206ENST00000503565 BMP6P22004 513 aa7□□□□□ -1.29
SCLT1-206ENST00000503565 ZNF423Q2M1K9 1284 aa7□□□□□ -1.29
SCLT1-206ENST00000503565 KIAA1211Q6ZU35 1233 aa7□□□□□ -1.29
SCLT1-206ENST00000503565 ZC3HAV1Q7Z2W4 902 aaKnown RBP7□□□□□ -1.29
SCLT1-206ENST00000503565 AGGF1Q8N302 714 aaeCLIP7□□□□□ -1.29
SCLT1-206ENST00000503565 MSRB2Q9Y3D2 182 aa7□□□□□ -1.29
SCLT1-206ENST00000503565 ADAM23O75077 832 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 ESRRAP11474 423 aaPredicted RBP6.99□□□□□ -1.29
SCLT1-206ENST00000503565 GIPRP48546 466 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 PIP4K2BP78356 416 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 SEPT6Q14141 434 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 SUZ12Q15022 739 aaKnown RBP6.99□□□□□ -1.29
SCLT1-206ENST00000503565 Q6ZS46 218 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 CCDC84Q86UT8 332 aaPredicted RBP6.99□□□□□ -1.29
SCLT1-206ENST00000503565 KLHL23Q8NBE8 558 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 STK35Q8TDR2 534 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 UBASH3BQ8TF42 649 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 GATAD2BQ8WXI9 593 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
SCLT1-206ENST00000503565 KANSL2Q9H9L4 492 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 TMEM39AQ9NV64 488 aa6.99□□□□□ -1.29
SCLT1-206ENST00000503565 U2SURPO15042 1029 aaKnown RBP6.98□□□□□ -1.29
SCLT1-206ENST00000503565 CILPO75339 1184 aa6.98□□□□□ -1.29
SCLT1-206ENST00000503565 LRP10Q7Z4F1 713 aa6.98□□□□□ -1.29
SCLT1-206ENST00000503565 DZIP1LQ8IYY4 767 aaKnown RBP6.98□□□□□ -1.29
SCLT1-206ENST00000503565 JARID2Q92833 1246 aaPredicted RBP6.98□□□□□ -1.29
SCLT1-206ENST00000503565 WNT8BQ93098 351 aa6.98□□□□□ -1.29
SCLT1-206ENST00000503565 NRSN2Q9GZP1 204 aa6.98□□□□□ -1.29
SCLT1-206ENST00000503565 MIR1-1HGQ9H1L0 117 aa6.98□□□□□ -1.29
SCLT1-206ENST00000503565 AKTIPQ9H8T0 292 aa6.98□□□□□ -1.29
SCLT1-206ENST00000503565 OSGEPQ9NPF4 335 aa6.98□□□□□ -1.29
SCLT1-206ENST00000503565 CCDC85CA6NKD9 419 aa6.97□□□□□ -1.29
SCLT1-206ENST00000503565 DLGAP3O95886 979 aa6.97□□□□□ -1.29
SCLT1-206ENST00000503565 EIF6P56537 245 aaKnown RBP6.97□□□□□ -1.29
SCLT1-206ENST00000503565 MPP2Q14168 576 aa6.97□□□□□ -1.29
SCLT1-206ENST00000503565 PTPROQ16827 1216 aa6.97□□□□□ -1.29
SCLT1-206ENST00000503565 TNNI3KQ59H18 835 aa6.97□□□□□ -1.29
SCLT1-206ENST00000503565 SLC7A3Q8WY07 619 aa6.97□□□□□ -1.29
SCLT1-206ENST00000503565 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
SCLT1-206ENST00000503565 CLEC4MQ9H2X3 399 aaPredicted RBP6.97□□□□□ -1.29
SCLT1-206ENST00000503565 B3GALT4O96024 378 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 NME2P22392 152 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 MCM4P33991 863 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 CABP4P57796 275 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 CLCQ05315 142 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 PCDH1Q08174 1060 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 IKBKEQ14164 716 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 DDR2Q16832 855 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 REC114Q7Z4M0 266 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 LILRB2Q8N423 598 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 GRIN3AQ8TCU5 1115 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 KCNB2Q92953 911 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 GAL3ST3Q96A11 431 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 BRMS1Q9HCU9 246 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 ZNRF3Q9ULT6 936 aa6.96□□□□□ -1.3
SCLT1-206ENST00000503565 R3HCC1Q9Y3T6 440 aaKnown RBP6.96□□□□□ -1.3
SCLT1-206ENST00000503565 CTSBP07858 339 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 NLRP12P59046 1061 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 PTPN11Q06124 597 aaPredicted RBP6.95□□□□□ -1.3
SCLT1-206ENST00000503565 PPP2R3AQ06190 1150 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 C19orf57Q0VDD7 668 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 CWF19L2Q2TBE0 894 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms