RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 LINC00301Q8NCQ3 95 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 PCDHA7Q9UN72 937 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 ECM29Q5VYK3 1845 aa26.19■■□□□ 1.78
PCDH1-204ENST00000503492 MYH13Q9UKX3 1938 aa26.18■■□□□ 1.78
PCDH1-204ENST00000503492 MSNP26038 577 aaKnown RBP26.18■■□□□ 1.78
PCDH1-204ENST00000503492 IARSP41252 1262 aaKnown RBP26.18■■□□□ 1.78
PCDH1-204ENST00000503492 SNW1Q13573 536 aaKnown RBP26.18■■□□□ 1.78
PCDH1-204ENST00000503492 NSUN4Q96CB9 384 aaKnown RBP26.18■■□□□ 1.78
PCDH1-204ENST00000503492 PDS5AQ29RF7 1337 aaKnown RBP26.18■■□□□ 1.78
PCDH1-204ENST00000503492 WTAPQ15007 396 aa26.18■■□□□ 1.78
PCDH1-204ENST00000503492 TXNRD3Q86VQ6 643 aa26.18■■□□□ 1.78
PCDH1-204ENST00000503492 FAM200AQ8TCP9 573 aa26.18■■□□□ 1.78
PCDH1-204ENST00000503492 NID2Q14112 1375 aa26.17■■□□□ 1.78
PCDH1-204ENST00000503492 KRT40Q6A162 431 aa26.17■■□□□ 1.78
PCDH1-204ENST00000503492 ENGASEQ8NFI3 743 aa26.17■■□□□ 1.78
PCDH1-204ENST00000503492 MTA3Q9BTC8 594 aa26.17■■□□□ 1.78
PCDH1-204ENST00000503492 POLR3EQ9NVU0 708 aa26.17■■□□□ 1.78
PCDH1-204ENST00000503492 AP5Z1O43299 807 aa26.17■■□□□ 1.78
PCDH1-204ENST00000503492 HSPA1LP34931 641 aa26.17■■□□□ 1.78
PCDH1-204ENST00000503492 SART3Q15020 963 aaKnown RBP26.17■■□□□ 1.78
PCDH1-204ENST00000503492 BCL11BQ9C0K0 894 aaPredicted RBP26.17■■□□□ 1.78
PCDH1-204ENST00000503492 IRS2Q9Y4H2 1338 aa26.17■■□□□ 1.78
PCDH1-204ENST00000503492 MECOMQ03112 1051 aa26.16■■□□□ 1.78
PCDH1-204ENST00000503492 SYNE3Q6ZMZ3 975 aa26.16■■□□□ 1.78
PCDH1-204ENST00000503492 CCDC73Q6ZRK6 1079 aa26.16■■□□□ 1.78
PCDH1-204ENST00000503492 BRIP1Q9BX63 1249 aa26.16■■□□□ 1.78
PCDH1-204ENST00000503492 TRPC5Q9UL62 973 aaPredicted RBP26.16■■□□□ 1.78
PCDH1-204ENST00000503492 BAZ2AQ9UIF9 1905 aaKnown RBP26.16■■□□□ 1.78
PCDH1-204ENST00000503492 ANO6Q4KMQ2 910 aa26.15■■□□□ 1.78
PCDH1-204ENST00000503492 SLC51AQ86UW1 340 aa26.15■■□□□ 1.78
PCDH1-204ENST00000503492 FSIP1Q8NA03 581 aa26.15■■□□□ 1.78
PCDH1-204ENST00000503492 ZKSCAN5Q9Y2L8 839 aa26.15■■□□□ 1.78
PCDH1-204ENST00000503492 UBE2Q2LH0YL09 131 aa26.15■■□□□ 1.78
PCDH1-204ENST00000503492 YEATS4O95619 227 aa26.15■■□□□ 1.78
PCDH1-204ENST00000503492 CHAF1AQ13111 956 aaPredicted RBP26.15■■□□□ 1.78
PCDH1-204ENST00000503492 STK38Q15208 465 aa26.15■■□□□ 1.78
PCDH1-204ENST00000503492 STK36Q9NRP7 1315 aa26.14■■□□□ 1.78
PCDH1-204ENST00000503492 CYP2D7A0A087X1C5 515 aa26.14■■□□□ 1.78
PCDH1-204ENST00000503492 ERICH2A1L162 156 aa26.14■■□□□ 1.78
PCDH1-204ENST00000503492 FAM160A1Q05DH4 1040 aa26.14■■□□□ 1.78
PCDH1-204ENST00000503492 ADALQ6DHV7 355 aa26.14■■□□□ 1.78
PCDH1-204ENST00000503492 SASS6Q6UVJ0 657 aa26.14■■□□□ 1.78
PCDH1-204ENST00000503492 PTMAP06454 111 aaKnown RBP26.14■■□□□ 1.77
PCDH1-204ENST00000503492 IFNAR1P17181 557 aa26.14■■□□□ 1.77
PCDH1-204ENST00000503492 SSRP1Q08945 709 aaKnown RBP26.14■■□□□ 1.77
PCDH1-204ENST00000503492 SLC26A6Q9BXS9 759 aa26.14■■□□□ 1.77
PCDH1-204ENST00000503492 FMNL1O95466 1100 aaPredicted RBP26.13■■□□□ 1.77
PCDH1-204ENST00000503492 PRDX5P30044 214 aa26.13■■□□□ 1.77
PCDH1-204ENST00000503492 TMTC2Q8N394 836 aa26.13■■□□□ 1.77
PCDH1-204ENST00000503492 CNBD1Q8NA66 436 aa26.13■■□□□ 1.77
PCDH1-204ENST00000503492 KCNG4Q8TDN1 519 aa26.13■■□□□ 1.77
PCDH1-204ENST00000503492 TAOK2Q9UL54 1235 aa26.13■■□□□ 1.77
PCDH1-204ENST00000503492 GRAPQ13588 217 aa26.13■■□□□ 1.77
PCDH1-204ENST00000503492 GRAPLQ8TC17 118 aaPredicted RBP26.13■■□□□ 1.77
PCDH1-204ENST00000503492 ESR2Q92731 530 aa26.13■■□□□ 1.77
PCDH1-204ENST00000503492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.12■■□□□ 1.77
PCDH1-204ENST00000503492 SPTLC2O15270 562 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 RTN1Q16799 776 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 ANO1Q5XXA6 986 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 LUZP1Q86V48 1076 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 MRPS27Q92552 414 aaKnown RBP26.12■■□□□ 1.77
PCDH1-204ENST00000503492 UBAC1Q9BSL1 405 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 CBX8Q9HC52 389 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 A0A1W2PQ27 194 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 A0A1W2PQ64 194 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 A0A1W2PQD8 194 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 PLCB2Q00722 1185 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 SEC23AQ15436 765 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 SF3A1Q15459 793 aaKnown RBP26.12■■□□□ 1.77
PCDH1-204ENST00000503492 CERKQ8TCT0 537 aa26.12■■□□□ 1.77
PCDH1-204ENST00000503492 DUOX1Q9NRD9 1551 aa26.11■■□□□ 1.77
PCDH1-204ENST00000503492 CTAGE5O15320 804 aa26.11■■□□□ 1.77
PCDH1-204ENST00000503492 ADRA2BP18089 450 aa26.11■■□□□ 1.77
PCDH1-204ENST00000503492 CTR9Q6PD62 1173 aa26.11■■□□□ 1.77
PCDH1-204ENST00000503492 JAG2Q9Y219 1238 aa26.11■■□□□ 1.77
PCDH1-204ENST00000503492 KINO60870 393 aaKnown RBP26.11■■□□□ 1.77
PCDH1-204ENST00000503492 ZNF654Q8IZM8 581 aa26.11■■□□□ 1.77
PCDH1-204ENST00000503492 FMR1NBQ8N0W7 255 aaPredicted RBP26.11■■□□□ 1.77
PCDH1-204ENST00000503492 AATFQ9NY61 560 aaKnown RBP eCLIP26.11■■□□□ 1.77
PCDH1-204ENST00000503492 TNKSO95271 1327 aa26.1■■□□□ 1.77
PCDH1-204ENST00000503492 PRR5LQ6MZQ0 368 aa26.1■■□□□ 1.77
PCDH1-204ENST00000503492 MYH2Q9UKX2 1941 aa26.1■■□□□ 1.77
PCDH1-204ENST00000503492 GUCY1A2P33402 732 aa26.1■■□□□ 1.77
PCDH1-204ENST00000503492 ANKIB1Q9P2G1 1089 aa26.1■■□□□ 1.77
PCDH1-204ENST00000503492 UBR3Q6ZT12 1888 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 A0A1B0GVL5 298 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 USP17L12C9JPN9 530 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 USP17L21D6R901 530 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 ZBTB22O15209 634 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 RCAN1P53805 252 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 TRIM29Q14134 588 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 NBPF11Q86T75 865 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 DNAJC25Q9H1X3 360 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 FGRP09769 529 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 U2AF2P26368 475 aaKnown RBP eCLIP26.09■■□□□ 1.77
PCDH1-204ENST00000503492 MPNDQ8N594 471 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 FANCBQ8NB91 859 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 NUP133Q8WUM0 1156 aa26.09■■□□□ 1.77
PCDH1-204ENST00000503492 ZNF500O60304 480 aaPredicted RBP26.08■■□□□ 1.77
PCDH1-204ENST00000503492 NDUFA8P51970 172 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms