RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 COL27A1Q8IZC6 1860 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 PSDA5PKW4 1024 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ARID3CA6NKF2 412 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 SMTNL1A8MU46 457 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 K7ELQ4 463 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 STBD1O95210 358 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CREB5Q02930 508 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 NOLC1Q14978 699 aaKnown RBP eCLIP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 C20orf194Q5TEA3 1177 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ICE2Q659A1 982 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 DGKHQ86XP1 1220 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 KBTBD3Q8NAB2 608 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ZNF397Q8NF99 534 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CXorf38Q8TB03 319 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 FBXO41Q8TF61 875 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 FIZ1Q96SL8 496 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 SWAP70Q9UH65 585 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CDK17Q00537 523 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 MDM2Q00987 491 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 TNFAIP8L3Q5GJ75 292 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 JAKMIP3Q5VZ66 844 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CCDC91Q7Z6B0 441 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 DZIP1LQ8IYY4 767 aaKnown RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 USP6NLQ92738 828 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 NTPCRQ9BSD7 190 aaKnown RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 UTP14AQ9BVJ6 771 aaKnown RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CABP2Q9NPB3 220 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 DDX41Q9UJV9 622 aaKnown RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 HPS5Q9UPZ3 1129 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ATG2AQ2TAZ0 1938 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 NEFHP12036 1026 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 HHIPL2Q6UWX4 724 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 TTYH3Q9C0H2 523 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ZRANB1Q9UGI0 708 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 TRAK1Q9UPV9 953 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 PPME1Q9Y570 386 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 MAPK13O15264 365 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ZFYP08048 801 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ADAM17P78536 824 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 TRDNQ13061 729 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 ITPK1Q13572 414 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 FAM83AQ86UY5 434 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 TNPO1Q92973 898 aaKnown RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CHMP4CQ96CF2 233 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 EAF2Q96CJ1 260 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 RIOX1Q9H6W3 641 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 BSDC1Q9NW68 430 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 FZD9O00144 591 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 BAG4O95429 457 aaKnown RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 STAU1O95793 577 aaKnown RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CHMLP26374 656 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CASQ1P31415 396 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 TERF2Q15554 542 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 XKR4Q5GH76 650 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 NIPA1Q7RTP0 329 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 FILIP1Q7Z7B0 1213 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 MAGEB6Q8N7X4 407 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 PURBQ96QR8 312 aaKnown RBP3.27□□□□□ -1.89
NEDD4-204ENST00000503468 SLC26A8Q96RN1 970 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 CEP72Q9P209 647 aa3.27□□□□□ -1.89
NEDD4-204ENST00000503468 TAZQ16635 292 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 STYK1Q6J9G0 422 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 POTEEQ6S8J3 1075 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 TMEM139Q8IV31 216 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 RASGRP3Q8IV61 690 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 CNPY4Q8N129 248 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 FLAD1Q8NFF5 587 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 DPF2Q92785 391 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 ZFP91Q96JP5 570 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 CFAP53Q96M91 514 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 FBXL18Q96ME1 805 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 EDEM3Q9BZQ6 932 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 CACNA1AO00555 2505 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 POLRMTO00411 1230 aaKnown RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 GUCY2CP25092 1073 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 SATB1Q01826 763 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 ZRSR1Q15695 479 aaKnown RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 ERO1AQ96HE7 468 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 PLXNA4Q9HCM2 1894 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 CTIFO43310 598 aaKnown RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 MAP3K9P80192 1104 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 E2F4Q16254 413 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 C1orf53Q5VUE5 145 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 ZNF276Q8N554 614 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 VOPP1Q96AW1 172 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 DBNLQ9UJU6 430 aaKnown RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 TDRD15B5MCY1 1934 aaKnown RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 KIF3CO14782 793 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 CAPNS1P04632 268 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 MYL1P05976 194 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 IFNAR1P17181 557 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 SWT1Q5T5J6 900 aaKnown RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 UBE2Q1Q7Z7E8 422 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 FAM71BQ8TC56 605 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 LENG9Q96B70 501 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 RNF25Q96BH1 459 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-204ENST00000503468 PHACTR1Q9C0D0 580 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 TSPY26PQ9H489 355 aa3.26□□□□□ -1.89
NEDD4-204ENST00000503468 ZFYVE28Q9HCC9 887 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms