RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 WDHD1O75717 1129 aaPredicted RBP23.89■■□□□ 1.41
UBE2D3-215ENST00000503418 SP3Q02447 781 aa23.89■■□□□ 1.41
UBE2D3-215ENST00000503418 CCDC158Q5M9N0 1113 aa23.89■■□□□ 1.41
UBE2D3-215ENST00000503418 NSUN4Q96CB9 384 aaKnown RBP23.89■■□□□ 1.41
UBE2D3-215ENST00000503418 DDX4Q9NQI0 724 aaKnown RBP23.89■■□□□ 1.41
UBE2D3-215ENST00000503418 SNRKQ9NRH2 765 aa23.89■■□□□ 1.41
UBE2D3-215ENST00000503418 LRP2BPQ9P2M1 347 aa23.89■■□□□ 1.41
UBE2D3-215ENST00000503418 GPR75-ASB3A0A0A6YYF3 556 aa23.88■■□□□ 1.41
UBE2D3-215ENST00000503418 LDHCP07864 332 aa23.88■■□□□ 1.41
UBE2D3-215ENST00000503418 SH3BP5LQ7L8J4 393 aa23.88■■□□□ 1.41
UBE2D3-215ENST00000503418 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.88■■□□□ 1.41
UBE2D3-215ENST00000503418 BTBD19C9JJ37 291 aa23.87■■□□□ 1.41
UBE2D3-215ENST00000503418 NOL9Q5SY16 702 aaKnown RBP23.87■■□□□ 1.41
UBE2D3-215ENST00000503418 CEP85Q6P2H3 762 aa23.87■■□□□ 1.41
UBE2D3-215ENST00000503418 NOP58Q9Y2X3 529 aaKnown RBP23.87■■□□□ 1.41
UBE2D3-215ENST00000503418 ATRNL1Q5VV63 1379 aa23.87■■□□□ 1.41
UBE2D3-215ENST00000503418 DDTLA6NHG4 134 aaPredicted RBP23.86■■□□□ 1.41
UBE2D3-215ENST00000503418 RHBDL3P58872 404 aa23.86■■□□□ 1.41
UBE2D3-215ENST00000503418 MAST2Q6P0Q8 1798 aa23.86■■□□□ 1.41
UBE2D3-215ENST00000503418 MS4A1P11836 297 aa23.85■■□□□ 1.41
UBE2D3-215ENST00000503418 EFCC1Q9HA90 598 aa23.85■■□□□ 1.41
UBE2D3-215ENST00000503418 MYO5AQ9Y4I1 1855 aaKnown RBP23.84■■□□□ 1.41
UBE2D3-215ENST00000503418 SLURP2P0DP57 97 aa23.84■■□□□ 1.41
UBE2D3-215ENST00000503418 NOL10Q9BSC4 688 aaKnown RBP23.84■■□□□ 1.41
UBE2D3-215ENST00000503418 CCDC8Q9H0W5 538 aaPredicted RBP23.84■■□□□ 1.41
UBE2D3-215ENST00000503418 ZCCHC17Q9NP64 241 aaKnown RBP23.84■■□□□ 1.41
UBE2D3-215ENST00000503418 PHF20L1A8MW92 1017 aa23.83■■□□□ 1.41
UBE2D3-215ENST00000503418 SCYL3Q8IZE3 742 aa23.83■■□□□ 1.41
UBE2D3-215ENST00000503418 PICK1Q9NRD5 415 aa23.83■■□□□ 1.41
UBE2D3-215ENST00000503418 TLR7Q9NYK1 1049 aaKnown RBP23.83■■□□□ 1.41
UBE2D3-215ENST00000503418 DBNLQ9UJU6 430 aaKnown RBP23.83■■□□□ 1.41
UBE2D3-215ENST00000503418 KCNH4Q9UQ05 1017 aa23.83■■□□□ 1.41
UBE2D3-215ENST00000503418 EXOC6BQ9Y2D4 811 aa23.83■■□□□ 1.41
UBE2D3-215ENST00000503418 DOCK1Q14185 1865 aa23.82■■□□□ 1.4
UBE2D3-215ENST00000503418 TLR2O60603 784 aa23.82■■□□□ 1.4
UBE2D3-215ENST00000503418 CYP2E1P05181 493 aaPredicted RBP23.82■■□□□ 1.4
UBE2D3-215ENST00000503418 CAP1Q01518 475 aa23.82■■□□□ 1.4
UBE2D3-215ENST00000503418 NAA16Q6N069 864 aaPredicted RBP23.82■■□□□ 1.4
UBE2D3-215ENST00000503418 PTPN22Q9Y2R2 807 aa23.82■■□□□ 1.4
UBE2D3-215ENST00000503418 MAP4K4O95819 1239 aaPredicted RBP23.81■■□□□ 1.4
UBE2D3-215ENST00000503418 ZAP70P43403 619 aa23.81■■□□□ 1.4
UBE2D3-215ENST00000503418 TEX11Q8IYF3 940 aa23.81■■□□□ 1.4
UBE2D3-215ENST00000503418 EAF2Q96CJ1 260 aaPredicted RBP23.81■■□□□ 1.4
UBE2D3-215ENST00000503418 PDHXO00330 501 aa23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 NPM3O75607 178 aaKnown RBP23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 MAP3K10Q02779 954 aa23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 ARHGEF6Q15052 776 aa23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 ANKRD23Q86SG2 305 aa23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 ERC1Q8IUD2 1116 aa23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 SH3RF3Q8TEJ3 882 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 ZNF512BQ96KM6 892 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 OSBPL5Q9H0X9 879 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 AATFQ9NY61 560 aaKnown RBP eCLIP23.8■■□□□ 1.46e-12■■□□□ 12.2
UBE2D3-215ENST00000503418 COG6Q9Y2V7 657 aa23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 ZHX2Q9Y6X8 837 aa23.8■■□□□ 1.4
UBE2D3-215ENST00000503418 FAM196BA6NMK8 535 aa23.79■■□□□ 1.4
UBE2D3-215ENST00000503418 PTPRAP18433 802 aa23.79■■□□□ 1.4
UBE2D3-215ENST00000503418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.79■■□□□ 1.4
UBE2D3-215ENST00000503418 RCAN3Q9UKA8 241 aa23.79■■□□□ 1.4
UBE2D3-215ENST00000503418 ZSWIM8A7E2V4 1837 aa23.79■■□□□ 1.4
UBE2D3-215ENST00000503418 CXCL11O14625 94 aa23.78■■□□□ 1.4
UBE2D3-215ENST00000503418 CTNND1O60716 968 aaKnown RBP23.78■■□□□ 1.4
UBE2D3-215ENST00000503418 BAG3O95817 575 aa23.78■■□□□ 1.4
UBE2D3-215ENST00000503418 KIF22Q14807 665 aa23.78■■□□□ 1.4
UBE2D3-215ENST00000503418 AACSQ86V21 672 aa23.78■■□□□ 1.4
UBE2D3-215ENST00000503418 PIH1D3Q9NQM4 214 aaKnown RBP23.78■■□□□ 1.4
UBE2D3-215ENST00000503418 DDX19BQ9UMR2 479 aa23.78■■□□□ 1.4
UBE2D3-215ENST00000503418 HTTP42858 3142 aa23.78■■□□□ 1.4
UBE2D3-215ENST00000503418 CDK5RAP2Q96SN8 1893 aa23.77■■□□□ 1.4
UBE2D3-215ENST00000503418 COL2A1P02458 1487 aaPredicted RBP23.77■■□□□ 1.4
UBE2D3-215ENST00000503418 MOGSQ13724 837 aa23.77■■□□□ 1.4
UBE2D3-215ENST00000503418 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.77■■□□□ 1.4
UBE2D3-215ENST00000503418 CPA4Q9UI42 421 aa23.77■■□□□ 1.4
UBE2D3-215ENST00000503418 PHIPQ8WWQ0 1821 aa23.77■■□□□ 1.4
UBE2D3-215ENST00000503418 PTPRFP10586 1907 aa23.76■■□□□ 1.39
UBE2D3-215ENST00000503418 TBC1D12O60347 775 aa23.76■■□□□ 1.39
UBE2D3-215ENST00000503418 ECM2O94769 699 aaPredicted RBP23.76■■□□□ 1.39
UBE2D3-215ENST00000503418 PLCG2P16885 1265 aa23.76■■□□□ 1.39
UBE2D3-215ENST00000503418 HSP90AB4PQ58FF6 505 aa23.76■■□□□ 1.39
UBE2D3-215ENST00000503418 ADGRA1Q86SQ6 560 aa23.76■■□□□ 1.39
UBE2D3-215ENST00000503418 ARHGAP39Q9C0H5 1083 aa23.76■■□□□ 1.39
UBE2D3-215ENST00000503418 IL1RAPL2Q9NP60 686 aa23.76■■□□□ 1.39
UBE2D3-215ENST00000503418 ATAD5Q96QE3 1844 aa23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 TNRC18O15417 2968 aaPredicted RBP23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 APBB1O00213 710 aa23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 IDH1O75874 414 aaKnown RBP23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 LACTBP83111 547 aaPredicted RBP23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 GADL1Q6ZQY3 521 aa23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 CCDC84Q86UT8 332 aaPredicted RBP23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 AFG3L2Q9Y4W6 797 aa23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 NDUFB9Q9Y6M9 179 aa23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 FOCADQ5VW36 1801 aa23.75■■□□□ 1.39
UBE2D3-215ENST00000503418 A0A0G2JLL6 359 aaPredicted RBP23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 TRIM75PA6NK02 468 aa23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 C17orf99Q6UX52 265 aa23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 FASTKD5Q7L8L6 764 aaKnown RBP23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 PRRT2Q7Z6L0 340 aaPredicted RBP23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 RHPN1Q8TCX5 695 aa23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 TGFBRAP1Q8WUH2 860 aa23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 PARK7Q99497 189 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms