RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 DCAF15Q66K64 600 aa22.1■■□□□ 1.13
PDLIM7-209ENST00000503346 SH3BP5LQ7L8J4 393 aa22.1■■□□□ 1.13
PDLIM7-209ENST00000503346 ADD2P35612 726 aa22.09■■□□□ 1.13
PDLIM7-209ENST00000503346 NUCB1Q02818 461 aa22.09■■□□□ 1.13
PDLIM7-209ENST00000503346 ANKRD13AQ8IZ07 590 aa22.09■■□□□ 1.13
PDLIM7-209ENST00000503346 MIGA1Q8NAN2 632 aa22.09■■□□□ 1.13
PDLIM7-209ENST00000503346 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.09■■□□□ 1.13
PDLIM7-209ENST00000503346 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.09■■□□□ 1.134e-11■■■□□ 16.5
PDLIM7-209ENST00000503346 OSBPL5Q9H0X9 879 aaPredicted RBP22.09■■□□□ 1.13
PDLIM7-209ENST00000503346 STAP2Q9UGK3 403 aa22.09■■□□□ 1.13
PDLIM7-209ENST00000503346 ATRNL1Q5VV63 1379 aa22.09■■□□□ 1.13
PDLIM7-209ENST00000503346 ZNF532Q9HCE3 1301 aa22.08■■□□□ 1.13
PDLIM7-209ENST00000503346 DYNLL1P63167 89 aaKnown RBP22.08■■□□□ 1.13
PDLIM7-209ENST00000503346 B4GALNT3Q6L9W6 998 aa22.08■■□□□ 1.13
PDLIM7-209ENST00000503346 LNPKQ9C0E8 428 aa22.08■■□□□ 1.13
PDLIM7-209ENST00000503346 COL2A1P02458 1487 aaPredicted RBP22.08■■□□□ 1.12
PDLIM7-209ENST00000503346 DDTLA6NHG4 134 aaPredicted RBP22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 MAP3K9P80192 1104 aa22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 MAP2K1Q02750 393 aaPredicted RBP22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 CHD1LQ86WJ1 897 aa22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 ZSCAN29Q8IWY8 852 aaPredicted RBP22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 KBTBD3Q8NAB2 608 aa22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 CSRNP1Q96S65 589 aa22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 RIOK1Q9BRS2 568 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 ZNF341Q9BYN7 854 aa22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 MYO5AQ9Y4I1 1855 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-209ENST00000503346 PDE1AP54750 535 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 MAP3K10Q02779 954 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 UBE3CQ15386 1083 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 ZSCAN25Q6NSZ9 544 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 MIGA2Q7L4E1 593 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 TGFBRAP1Q8WUH2 860 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 SLC10A4Q96EP9 437 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 CLMNQ96JQ2 1002 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 ZIC5Q96T25 663 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 WBP1LQ9NX94 342 aa22.06■■□□□ 1.12
PDLIM7-209ENST00000503346 MAGEB6P1A0A0J9YX57 407 aa22.05■■□□□ 1.12
PDLIM7-209ENST00000503346 ZNF112Q9UJU3 913 aa22.05■■□□□ 1.12
PDLIM7-209ENST00000503346 FLT1P17948 1338 aa22.05■■□□□ 1.12
PDLIM7-209ENST00000503346 HSPA1AP0DMV8 641 aaKnown RBP22.04■■□□□ 1.12
PDLIM7-209ENST00000503346 HSPA1BP0DMV9 641 aaKnown RBP22.04■■□□□ 1.12
PDLIM7-209ENST00000503346 KIF23Q02241 960 aaPredicted RBP22.04■■□□□ 1.12
PDLIM7-209ENST00000503346 VGLL4Q14135 290 aa22.04■■□□□ 1.12
PDLIM7-209ENST00000503346 SPRYD7Q5W111 196 aa22.04■■□□□ 1.12
PDLIM7-209ENST00000503346 MAPKAPK5Q8IW41 473 aa22.04■■□□□ 1.12
PDLIM7-209ENST00000503346 WRNIP1Q96S55 665 aa22.04■■□□□ 1.12
PDLIM7-209ENST00000503346 SLFNL1Q499Z3 407 aa22.03■■□□□ 1.12
PDLIM7-209ENST00000503346 REM2Q8IYK8 340 aaPredicted RBP22.03■■□□□ 1.12
PDLIM7-209ENST00000503346 DHX36Q9H2U1 1008 aaKnown RBP22.03■■□□□ 1.12
PDLIM7-209ENST00000503346 CSADQ9Y600 493 aa22.03■■□□□ 1.12
PDLIM7-209ENST00000503346 PCNTO95613 3336 aa22.03■■□□□ 1.12
PDLIM7-209ENST00000503346 TBC1D12O60347 775 aa22.02■■□□□ 1.12
PDLIM7-209ENST00000503346 CHGBP05060 677 aa22.02■■□□□ 1.12
PDLIM7-209ENST00000503346 ZBTB48P10074 688 aaPredicted RBP22.02■■□□□ 1.12
PDLIM7-209ENST00000503346 WNK4Q96J92 1243 aa22.02■■□□□ 1.12
PDLIM7-209ENST00000503346 ZFYP08048 801 aaPredicted RBP22.01■■□□□ 1.11
PDLIM7-209ENST00000503346 USP5P45974 858 aa22.01■■□□□ 1.11
PDLIM7-209ENST00000503346 LCORLQ8N3X6 602 aa22.01■■□□□ 1.11
PDLIM7-209ENST00000503346 ZKSCAN4Q969J2 545 aaPredicted RBP22.01■■□□□ 1.11
PDLIM7-209ENST00000503346 OSBPL3Q9H4L5 887 aa22.01■■□□□ 1.11
PDLIM7-209ENST00000503346 ELP3Q9H9T3 547 aa22.01■■□□□ 1.11
PDLIM7-209ENST00000503346 PI4KBQ9UBF8 816 aa22.01■■□□□ 1.11
PDLIM7-209ENST00000503346 SNCAIPQ9Y6H5 919 aa22.01■■□□□ 1.11
PDLIM7-209ENST00000503346 PHF20L1A8MW92 1017 aa22■■□□□ 1.11
PDLIM7-209ENST00000503346 INPP5BP32019 993 aa22■■□□□ 1.11
PDLIM7-209ENST00000503346 LRRFIP1Q32MZ4 808 aaKnown RBP22■■□□□ 1.11
PDLIM7-209ENST00000503346 NOL9Q5SY16 702 aaKnown RBP22■■□□□ 1.11
PDLIM7-209ENST00000503346 PLEKHM2Q8IWE5 1019 aa22■■□□□ 1.11
PDLIM7-209ENST00000503346 CRNKL1Q9BZJ0 848 aaKnown RBP22■■□□□ 1.11
PDLIM7-209ENST00000503346 SPDYE5A6NIY4 337 aa21.99■■□□□ 1.11
PDLIM7-209ENST00000503346 RNF113AO15541 343 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-209ENST00000503346 GJA5P36382 358 aa21.99■■□□□ 1.11
PDLIM7-209ENST00000503346 MKRN3Q13064 507 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-209ENST00000503346 AIDAQ96BJ3 306 aa21.99■■□□□ 1.11
PDLIM7-209ENST00000503346 OPTNQ96CV9 577 aa21.99■■□□□ 1.11
PDLIM7-209ENST00000503346 ARMT1Q9H993 441 aa21.99■■□□□ 1.11
PDLIM7-209ENST00000503346 MBD4O95243 580 aa21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 SLURP2P0DP57 97 aa21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 METTL16Q86W50 562 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 APPBP2Q92624 585 aa21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 FSD1Q9BTV5 496 aa21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 BEGAINQ9BUH8 593 aa21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 PUS7LQ9H0K6 701 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.98■■□□□ 1.112e-6■■■■■ 52.9
PDLIM7-209ENST00000503346 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 HERC5Q9UII4 1024 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 PALD1Q9ULE6 856 aa21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 OTOFQ9HC10 1997 aa21.98■■□□□ 1.11
PDLIM7-209ENST00000503346 MANSC4A6NHS7 340 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-209ENST00000503346 CA12O43570 354 aa21.97■■□□□ 1.11
PDLIM7-209ENST00000503346 TM4SF4P48230 202 aa21.97■■□□□ 1.11
PDLIM7-209ENST00000503346 ERO1BQ86YB8 467 aa21.97■■□□□ 1.11
PDLIM7-209ENST00000503346 FOXP4Q8IVH2 680 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-209ENST00000503346 CNKSR2Q8WXI2 1034 aa21.97■■□□□ 1.11
PDLIM7-209ENST00000503346 EVI5LQ96CN4 794 aa21.97■■□□□ 1.11
PDLIM7-209ENST00000503346 SAP30BPQ9UHR5 308 aaKnown RBP21.97■■□□□ 1.11
PDLIM7-209ENST00000503346 FOXN1O15353 648 aa21.96■■□□□ 1.11
PDLIM7-209ENST00000503346 HLA-DOAP06340 250 aa21.96■■□□□ 1.11
PDLIM7-209ENST00000503346 CENPBP07199 599 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms